RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 WDR78Q5VTH9 848 aa14.11□□□□□ -0.15
CDK5RAP3-223ENST00000582114 GPR142Q7Z601 462 aa14.11□□□□□ -0.15
CDK5RAP3-223ENST00000582114 NECAB2Q7Z6G3 386 aa14.11□□□□□ -0.15
CDK5RAP3-223ENST00000582114 SDR42E1Q8WUS8 393 aa14.11□□□□□ -0.15
CDK5RAP3-223ENST00000582114 KIF1BPQ96EK5 621 aa14.11□□□□□ -0.15
CDK5RAP3-223ENST00000582114 EHD4Q9H223 541 aa14.11□□□□□ -0.15
CDK5RAP3-223ENST00000582114 CABP5Q9NP86 173 aa14.11□□□□□ -0.15
CDK5RAP3-223ENST00000582114 MCM9Q9NXL9 1143 aa14.11□□□□□ -0.15
CDK5RAP3-223ENST00000582114 RANBP2P49792 3224 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-223ENST00000582114 SZT2Q5T011 3432 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 ALPK3Q96L96 1907 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 USP17L15C9J2P7 530 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 USP17L13C9JLJ4 530 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 USP17L11C9JVI0 530 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 USP17L18D6R9N7 530 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 USP17L22D6RA61 530 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 USP17L17D6RBQ6 530 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 USP17L19D6RCP7 530 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 USP17L20D6RJB6 530 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 MPHOSPH10O00566 681 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 CNMDO75829 334 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 CYP2D6P10635 497 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 ZKSCAN1P17029 563 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 VCAM1P19320 739 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 MAPK4P31152 587 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 USP17L24Q0WX57 530 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 SEPT2Q15019 361 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 CCL14Q16627 93 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 PLEKHH3Q7Z736 793 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 C7orf61Q8IZ16 206 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 LCORLQ8N3X6 602 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 SOCS4Q8WXH5 440 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 CRNKL1Q9BZJ0 848 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 BOLA2Q9H3K6 86 aa14.1□□□□□ -0.15
CDK5RAP3-223ENST00000582114 TCRBV5S4A2TA0A5A2 114 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 HMMRO75330 724 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 CHGBP05060 677 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 MS4A1P11836 297 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 GUCY1A2P33402 732 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 RPAP2Q8IXW5 612 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 SLC44A5Q8NCS7 719 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 GTF3C2Q8WUA4 911 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 C12orf42Q96LP6 360 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 RPAP3Q9H6T3 665 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 ARMT1Q9H993 441 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 ZBTB40Q9NUA8 1239 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 STAP2Q9UGK3 403 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 DDX19BQ9UMR2 479 aa14.09□□□□□ -0.15
CDK5RAP3-223ENST00000582114 CCND3P30281 292 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-223ENST00000582114 RGS2P41220 211 aa14.08□□□□□ -0.16
CDK5RAP3-223ENST00000582114 USP14P54578 494 aa14.08□□□□□ -0.16
CDK5RAP3-223ENST00000582114 GABPAQ06546 454 aa14.08□□□□□ -0.16
CDK5RAP3-223ENST00000582114 CACNB2Q08289 660 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-223ENST00000582114 MORN1Q5T089 497 aa14.08□□□□□ -0.16
CDK5RAP3-223ENST00000582114 CATSPERGQ6ZRH7 1159 aa14.08□□□□□ -0.16
CDK5RAP3-223ENST00000582114 KIAA1683Q9H0B3 1180 aa14.08□□□□□ -0.16
CDK5RAP3-223ENST00000582114 DCP1AQ9NPI6 582 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-223ENST00000582114 ZMYND8Q9ULU4 1186 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-223ENST00000582114 A0A1W2PRG0 241 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 SMIM22K7EJ46 135 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 PRKAB2O43741 272 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 MBD4O95243 580 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 XRCC5P13010 732 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 MNX1P50219 401 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 MAP3K21Q5TCX8 1036 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 C20orf194Q5TEA3 1177 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 TMED8Q6PL24 325 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 CLEC10AQ8IUN9 316 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 USP6NLQ92738 828 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 DYNLL2Q96FJ2 89 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 APBA2Q99767 749 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 NBPF3Q9H094 633 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 PRO3102Q9H379 93 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 C11orf49Q9H6J7 331 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 PAG1Q9NWQ8 432 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 BTBD7Q9P203 1132 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 RCAN3Q9UKA8 241 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 RABGAP1Q9Y3P9 1069 aa14.07□□□□□ -0.16
CDK5RAP3-223ENST00000582114 CYP2D7A0A087X1C5 515 aa14.06□□□□□ -0.16
CDK5RAP3-223ENST00000582114 SPDYE16A6NNV3 312 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-223ENST00000582114 SMARCA5O60264 1052 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-223ENST00000582114 RAB11FIP3O75154 756 aa14.06□□□□□ -0.16
CDK5RAP3-223ENST00000582114 SYN1P17600 705 aa14.06□□□□□ -0.16
CDK5RAP3-223ENST00000582114 CCNA1P78396 465 aa14.06□□□□□ -0.16
CDK5RAP3-223ENST00000582114 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-223ENST00000582114 ANKLE1Q8NAG6 615 aa14.06□□□□□ -0.16
CDK5RAP3-223ENST00000582114 FLRT1Q9NZU1 646 aa14.06□□□□□ -0.16
CDK5RAP3-223ENST00000582114 OGDHLQ9ULD0 1010 aa14.06□□□□□ -0.16
CDK5RAP3-223ENST00000582114 CAPN2P17655 700 aa14.05□□□□□ -0.16
CDK5RAP3-223ENST00000582114 ADD2P35612 726 aa14.05□□□□□ -0.16
CDK5RAP3-223ENST00000582114 MAP2K5Q13163 448 aa14.05□□□□□ -0.16
CDK5RAP3-223ENST00000582114 KIAA1755Q5JYT7 1200 aa14.05□□□□□ -0.16
CDK5RAP3-223ENST00000582114 TRMT44Q8IYL2 757 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-223ENST00000582114 TANGO6Q9C0B7 1094 aa14.05□□□□□ -0.16
CDK5RAP3-223ENST00000582114 BAZ2AQ9UIF9 1905 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-223ENST00000582114 AKR1B1P15121 316 aa14.04□□□□□ -0.16
CDK5RAP3-223ENST00000582114 ATP5JP18859 108 aa14.04□□□□□ -0.16
CDK5RAP3-223ENST00000582114 SPICE1Q8N0Z3 855 aa14.04□□□□□ -0.16
CDK5RAP3-223ENST00000582114 NPLOC4Q8TAT6 608 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms