RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 API5Q9BZZ5 524 aaKnown RBP15.67■□□□□ 0.1
SS18-219ENST00000581570 PALD1Q9ULE6 856 aa15.67■□□□□ 0.1
SS18-219ENST00000581570 ATP11BQ9Y2G3 1177 aa15.67■□□□□ 0.1
SS18-219ENST00000581570 FLT1P17948 1338 aa15.67■□□□□ 0.1
SS18-219ENST00000581570 ATAD5Q96QE3 1844 aa15.66■□□□□ 0.1
SS18-219ENST00000581570 UQCRFS1P1P0C7P4 283 aa15.66■□□□□ 0.1
SS18-219ENST00000581570 SLFN5Q08AF3 891 aa15.66■□□□□ 0.1
SS18-219ENST00000581570 C9orf50Q5SZB4 431 aa15.66■□□□□ 0.1
SS18-219ENST00000581570 MYLIPQ8WY64 445 aa15.66■□□□□ 0.1
SS18-219ENST00000581570 IVNS1ABPQ9Y6Y0 642 aa15.66■□□□□ 0.1
SS18-219ENST00000581570 GH2P01242 217 aa15.65■□□□□ 0.1
SS18-219ENST00000581570 HLA-DOAP06340 250 aa15.65■□□□□ 0.1
SS18-219ENST00000581570 HOXC6P09630 235 aa15.65■□□□□ 0.1
SS18-219ENST00000581570 CYP2C19P33261 490 aa15.65■□□□□ 0.1
SS18-219ENST00000581570 ZYXQ15942 572 aaKnown RBP15.65■□□□□ 0.1
SS18-219ENST00000581570 GJC2Q5T442 439 aaPredicted RBP15.65■□□□□ 0.1
SS18-219ENST00000581570 ATF7IPQ6VMQ6 1270 aa15.65■□□□□ 0.1
SS18-219ENST00000581570 ARRDC4Q8NCT1 418 aa15.65■□□□□ 0.1
SS18-219ENST00000581570 NPLOC4Q8TAT6 608 aa15.65■□□□□ 0.1
SS18-219ENST00000581570 C12orf42Q96LP6 360 aa15.65■□□□□ 0.1
SS18-219ENST00000581570 PRDM5Q9NQX1 630 aaPredicted RBP15.65■□□□□ 0.1
SS18-219ENST00000581570 SAP30BPQ9UHR5 308 aaKnown RBP15.65■□□□□ 0.1
SS18-219ENST00000581570 GNAI3P08754 354 aa15.64■□□□□ 0.09
SS18-219ENST00000581570 SMAD3P84022 425 aaKnown RBP15.64■□□□□ 0.09
SS18-219ENST00000581570 SLC39A5Q6ZMH5 540 aa15.64■□□□□ 0.09
SS18-219ENST00000581570 CATSPERGQ6ZRH7 1159 aa15.64■□□□□ 0.09
SS18-219ENST00000581570 TRPV1Q8NER1 839 aa15.64■□□□□ 0.09
SS18-219ENST00000581570 BADQ92934 168 aa15.64■□□□□ 0.09
SS18-219ENST00000581570 FEZ1Q99689 392 aa15.64■□□□□ 0.09
SS18-219ENST00000581570 SNRKQ9NRH2 765 aa15.64■□□□□ 0.09
SS18-219ENST00000581570 USP14P54578 494 aa15.63■□□□□ 0.09
SS18-219ENST00000581570 G3BP1Q13283 466 aaKnown RBP eCLIP15.63■□□□□ 0.09
SS18-219ENST00000581570 MTX1Q13505 466 aa15.63■□□□□ 0.09
SS18-219ENST00000581570 GRB14Q14449 540 aa15.63■□□□□ 0.09
SS18-219ENST00000581570 ADGRA1Q86SQ6 560 aa15.63■□□□□ 0.09
SS18-219ENST00000581570 SYMPKQ92797 1274 aaKnown RBP15.63■□□□□ 0.09
SS18-219ENST00000581570 TTYH1Q9H313 450 aaPredicted RBP15.63■□□□□ 0.09
SS18-219ENST00000581570 BTBD7Q9P203 1132 aa15.63■□□□□ 0.09
SS18-219ENST00000581570 KBTBD13C9JR72 458 aa15.62■□□□□ 0.09
SS18-219ENST00000581570 CYBAP13498 195 aa15.62■□□□□ 0.09
SS18-219ENST00000581570 FOSL2P15408 326 aa15.62■□□□□ 0.09
SS18-219ENST00000581570 LBX2Q6XYB7 198 aa15.62■□□□□ 0.09
SS18-219ENST00000581570 DPP9Q86TI2 863 aa15.62■□□□□ 0.09
SS18-219ENST00000581570 LAMA2P24043 3122 aaKnown RBP15.61■□□□□ 0.09
SS18-219ENST00000581570 IGHA2P01877 340 aa15.61■□□□□ 0.09
SS18-219ENST00000581570 RAB3GAP1Q15042 981 aa15.61■□□□□ 0.09
SS18-219ENST00000581570 TRIM60Q495X7 471 aa15.61■□□□□ 0.09
SS18-219ENST00000581570 TTC39AQ5SRH9 613 aa15.61■□□□□ 0.09
SS18-219ENST00000581570 ANO1Q5XXA6 986 aa15.61■□□□□ 0.09
SS18-219ENST00000581570 CDCA7LQ96GN5 454 aa15.61■□□□□ 0.09
SS18-219ENST00000581570 KIAA1683Q9H0B3 1180 aa15.61■□□□□ 0.09
SS18-219ENST00000581570 MAST2Q6P0Q8 1798 aa15.6■□□□□ 0.09
SS18-219ENST00000581570 SIPA1L1O43166 1804 aa15.6■□□□□ 0.09
SS18-219ENST00000581570 SPDYE16A6NNV3 312 aaPredicted RBP15.6■□□□□ 0.09
SS18-219ENST00000581570 CYP2E1P05181 493 aaPredicted RBP15.6■□□□□ 0.09
SS18-219ENST00000581570 VCAM1P19320 739 aa15.6■□□□□ 0.09
SS18-219ENST00000581570 DYNLL1P63167 89 aaKnown RBP15.6■□□□□ 0.09
SS18-219ENST00000581570 CCDC158Q5M9N0 1113 aa15.6■□□□□ 0.09
SS18-219ENST00000581570 OLFML2BQ68BL8 750 aa15.6■□□□□ 0.09
SS18-219ENST00000581570 TATDN1Q6P1N9 297 aa15.6■□□□□ 0.09
SS18-219ENST00000581570 SH3RF1Q7Z6J0 888 aa15.6■□□□□ 0.09
SS18-219ENST00000581570 ACER1Q8TDN7 264 aa15.6■□□□□ 0.09
SS18-219ENST00000581570 PDLIM7Q9NR12 457 aa15.6■□□□□ 0.09
SS18-219ENST00000581570 DNAH12Q6ZR08 3092 aa15.59■□□□□ 0.09
SS18-219ENST00000581570 VCANP13611 3396 aa15.59■□□□□ 0.09
SS18-219ENST00000581570 TRIM43BA6NCK2 446 aa15.59■□□□□ 0.09
SS18-219ENST00000581570 SEPT4O43236 478 aa15.59■□□□□ 0.09
SS18-219ENST00000581570 STRNO43815 780 aa15.59■□□□□ 0.09
SS18-219ENST00000581570 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
SS18-219ENST00000581570 ADCYAP1R1P41586 468 aa15.59■□□□□ 0.09
SS18-219ENST00000581570 SNX17Q15036 470 aa15.59■□□□□ 0.09
SS18-219ENST00000581570 CERKLQ49MI3 558 aaPredicted RBP15.59■□□□□ 0.09
SS18-219ENST00000581570 TRIM43Q96BQ3 446 aaPredicted RBP15.59■□□□□ 0.09
SS18-219ENST00000581570 RPAP3Q9H6T3 665 aaPredicted RBP15.59■□□□□ 0.09
SS18-219ENST00000581570 CABP5Q9NP86 173 aa15.59■□□□□ 0.09
SS18-219ENST00000581570 EYSQ5T1H1 3165 aa15.58■□□□□ 0.08
SS18-219ENST00000581570 TMEM265A0A087WTH1 108 aa15.58■□□□□ 0.08
SS18-219ENST00000581570 IGSF3O75054 1194 aa15.58■□□□□ 0.08
SS18-219ENST00000581570 ADORA2AP29274 412 aa15.58■□□□□ 0.08
SS18-219ENST00000581570 USP5P45974 858 aa15.58■□□□□ 0.08
SS18-219ENST00000581570 ABCB5Q2M3G0 1257 aa15.58■□□□□ 0.08
SS18-219ENST00000581570 FERMT2Q96AC1 680 aa15.58■□□□□ 0.08
SS18-219ENST00000581570 MOV10L1Q9BXT6 1211 aaKnown RBP15.58■□□□□ 0.08
SS18-219ENST00000581570 SERPINB13Q9UIV8 391 aa15.58■□□□□ 0.08
SS18-219ENST00000581570 PNMA6EA0A0J9YXQ4 647 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 GNAI2P04899 355 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 CYP7A1P22680 504 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 ZAP70P43403 619 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 TLE2Q04725 743 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 LRRC41Q15345 812 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 PRAMEF19Q5SWL8 479 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 C1orf53Q5VUE5 145 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 TRMT2AQ8IZ69 625 aaKnown RBP15.57■□□□□ 0.08
SS18-219ENST00000581570 RNPC3Q96LT9 517 aaKnown RBP15.57■□□□□ 0.08
SS18-219ENST00000581570 DBNDD2Q9BQY9 259 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 EHD4Q9H223 541 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 GPR108Q9NPR9 543 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 PIH1D3Q9NQM4 214 aaKnown RBP15.57■□□□□ 0.08
SS18-219ENST00000581570 HOXC10Q9NYD6 342 aa15.57■□□□□ 0.08
SS18-219ENST00000581570 TACC3Q9Y6A5 838 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms