RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 TESK2Q96S53 571 aa16.1■□□□□ 0.17
CSNK1D-217ENST00000581241 CALCRLQ16602 461 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 SRGAP1Q7Z6B7 1085 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 CCDC170Q8IYT3 715 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 ANKRD42Q8N9B4 389 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 TM6SF1Q9BZW5 370 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 USTQ9Y2C2 406 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 TRPM2O94759 1503 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 MORC3Q14149 939 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 VPS37BQ9H9H4 285 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 LRWD1Q9UFC0 647 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 PPARDQ03181 441 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 SH2D4BQ5SQS7 431 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 OGFOD1Q8N543 542 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 MYCBPQ99417 103 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 LZTS2Q9BRK4 669 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 DMTNQ08495 405 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 PHKBQ93100 1093 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 DCAF5Q96JK2 942 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 DSCC1Q9BVC3 393 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 PKD2L1Q9P0L9 805 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 KIAA1468Q9P260 1216 aa16.09■□□□□ 0.17
CSNK1D-217ENST00000581241 PFKFB1P16118 471 aa16.08■□□□□ 0.17
CSNK1D-217ENST00000581241 SNCBQ16143 134 aa16.08■□□□□ 0.17
CSNK1D-217ENST00000581241 ME3Q16798 604 aa16.08■□□□□ 0.17
CSNK1D-217ENST00000581241 ANKRD20A3Q5VUR7 823 aa16.08■□□□□ 0.17
CSNK1D-217ENST00000581241 DYMQ7RTS9 669 aa16.08■□□□□ 0.17
CSNK1D-217ENST00000581241 KLHL14Q9P2G3 628 aa16.08■□□□□ 0.17
CSNK1D-217ENST00000581241 ARHGEF35A5YM69 484 aa16.08■□□□□ 0.17
CSNK1D-217ENST00000581241 CA8P35219 290 aa16.08■□□□□ 0.17
CSNK1D-217ENST00000581241 ACSBG1Q96GR2 724 aa16.08■□□□□ 0.17
CSNK1D-217ENST00000581241 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.17
CSNK1D-217ENST00000581241 MAP3K21Q5TCX8 1036 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 GRK7Q8WTQ7 553 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 EYA1Q99502 592 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 SH2D4AQ9H788 454 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 LUC7L3O95232 432 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 HOXC9P31274 260 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 CCDC13Q8IYE1 715 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 TBC1D31Q96DN5 1066 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 DAPK3O43293 454 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 NR1I2O75469 434 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 ITGA6P23229 1130 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 SLC8A3P57103 927 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 IRX5P78411 483 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 KBTBD3Q8NAB2 608 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 TBC1D7Q9P0N9 293 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 MYO1AQ9UBC5 1043 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 DNM3Q9UQ16 869 aa16.08■□□□□ 0.16
CSNK1D-217ENST00000581241 CCDC89Q8N998 374 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 NGLY1Q96IV0 654 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 E7EWF7 191 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 C2CD5Q86YS7 1000 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 TEX11Q8IYF3 940 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 GPT2Q8TD30 523 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 GDAP1L1Q96MZ0 367 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 KCNJ14Q9UNX9 436 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 GCKP35557 465 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 PHLDB3Q6NSJ2 640 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 DDX27Q96GQ7 796 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 MRFAP1L1Q96HT8 127 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 RILPQ96NA2 401 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 WDR7Q9Y4E6 1490 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 PCDH11XQ9BZA7 1347 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 PCDH11YQ9BZA8 1340 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 GCNT3O95395 438 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 HARSP12081 509 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 PSMD6Q15008 389 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 VEZTQ9HBM0 779 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 YTHDC2Q9H6S0 1430 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 IL2RBP14784 551 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 APBA1Q02410 837 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 TPTE2Q6XPS3 522 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 MYCT1Q8N699 235 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 TACO1Q9BSH4 297 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 NPC1L1Q9UHC9 1359 aa16.07■□□□□ 0.16
CSNK1D-217ENST00000581241 TIMM10P62072 90 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 TSC1Q92574 1164 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 IBTKQ9P2D0 1353 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 PHBP35232 272 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 MRPL44Q9H9J2 332 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 SF3A3Q12874 501 aaKnown RBP eCLIP16.06■□□□□ 0.163e-7■■■□□ 16.8
CSNK1D-217ENST00000581241 HERC4Q5GLZ8 1057 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 OR8K1Q8NGG5 319 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 RBM17Q96I25 401 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 MYL10Q9BUA6 226 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 RNF123Q5XPI4 1314 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 HOXB7P09629 217 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 PPP2R5EQ16537 467 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 TRIM68Q6AZZ1 485 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 NELFCDQ8IXH7 590 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 PPP1R13BQ96KQ4 1090 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 FAM207AQ9NSI2 230 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 KRIT1O00522 736 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 ATP8B1O43520 1251 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 DKC1O60832 514 aaKnown RBP eCLIP16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 RNF34Q969K3 372 aa16.06■□□□□ 0.16
CSNK1D-217ENST00000581241 ERCC3P19447 782 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 SP4Q02446 784 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 CDAN1Q8IWY9 1227 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms