RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 SHISA4Q96DD7 197 aa25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 DYNLL2Q96FJ2 89 aa25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 KIAA1683Q9H0B3 1180 aa25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 PUS7LQ9H0K6 701 aaKnown RBP25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 UNC93B1Q9H1C4 597 aa25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 GJD2Q9UKL4 321 aa25.67■■□□□ 1.7
CSNK1D-216ENST00000581108 PLXNB2O15031 1838 aa25.66■■□□□ 1.7
CSNK1D-216ENST00000581108 MPHOSPH10O00566 681 aaKnown RBP25.66■■□□□ 1.7
CSNK1D-216ENST00000581108 INHAP05111 366 aa25.66■■□□□ 1.7
CSNK1D-216ENST00000581108 USP14P54578 494 aa25.66■■□□□ 1.7
CSNK1D-216ENST00000581108 Q3C1V9 767 aa25.66■■□□□ 1.7
CSNK1D-216ENST00000581108 GPRC5AQ8NFJ5 357 aa25.66■■□□□ 1.7
CSNK1D-216ENST00000581108 CYP2D7A0A087X1C5 515 aa25.65■■□□□ 1.7
CSNK1D-216ENST00000581108 SMIM22K7EJ46 135 aa25.65■■□□□ 1.7
CSNK1D-216ENST00000581108 GJA8P48165 433 aa25.65■■□□□ 1.7
CSNK1D-216ENST00000581108 NKX2-3Q8TAU0 364 aa25.65■■□□□ 1.7
CSNK1D-216ENST00000581108 USP17L15C9J2P7 530 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 USP17L13C9JLJ4 530 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 USP17L11C9JVI0 530 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 USP17L18D6R9N7 530 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 USP17L22D6RA61 530 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 USP17L17D6RBQ6 530 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 USP17L19D6RCP7 530 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 USP17L20D6RJB6 530 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 USP17L24Q0WX57 530 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 GPATCH3Q96I76 525 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 PAGR1Q9BTK6 254 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 SWAP70Q9UH65 585 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 SLC4A4Q9Y6R1 1079 aa25.64■■□□□ 1.7
CSNK1D-216ENST00000581108 USP17L12C9JPN9 530 aa25.63■■□□□ 1.69
CSNK1D-216ENST00000581108 USP17L21D6R901 530 aa25.63■■□□□ 1.69
CSNK1D-216ENST00000581108 VCAM1P19320 739 aa25.63■■□□□ 1.69
CSNK1D-216ENST00000581108 C12orf60Q5U649 245 aa25.63■■□□□ 1.69
CSNK1D-216ENST00000581108 CATSPERGQ6ZRH7 1159 aa25.63■■□□□ 1.69
CSNK1D-216ENST00000581108 YTHDC1Q96MU7 727 aaKnown RBP25.63■■□□□ 1.69
CSNK1D-216ENST00000581108 A0A1W2PRG0 241 aa25.62■■□□□ 1.69
CSNK1D-216ENST00000581108 ERVK-9P63128 1117 aa25.62■■□□□ 1.69
CSNK1D-216ENST00000581108 ERVK-24P63145 666 aa25.62■■□□□ 1.69
CSNK1D-216ENST00000581108 KBTBD3Q8NAB2 608 aa25.62■■□□□ 1.69
CSNK1D-216ENST00000581108 U2AF1L4Q8WU68 220 aaKnown RBP25.62■■□□□ 1.69
CSNK1D-216ENST00000581108 GTF3C2Q8WUA4 911 aaPredicted RBP25.61■■□□□ 1.69
CSNK1D-216ENST00000581108 CRBNQ96SW2 442 aa25.61■■□□□ 1.69
CSNK1D-216ENST00000581108 PORCNQ9H237 461 aa25.61■■□□□ 1.69
CSNK1D-216ENST00000581108 SGPL1O95470 568 aa25.6■■□□□ 1.69
CSNK1D-216ENST00000581108 AKR1B1P15121 316 aa25.6■■□□□ 1.69
CSNK1D-216ENST00000581108 CDK8P49336 464 aa25.6■■□□□ 1.69
CSNK1D-216ENST00000581108 CTR9Q6PD62 1173 aa25.6■■□□□ 1.69
CSNK1D-216ENST00000581108 TMEM179Q6ZVK1 233 aa25.6■■□□□ 1.69
CSNK1D-216ENST00000581108 AMOTL1Q8IY63 956 aa25.6■■□□□ 1.69
CSNK1D-216ENST00000581108 DDRGK1Q96HY6 314 aa25.6■■□□□ 1.69
CSNK1D-216ENST00000581108 STRBPQ96SI9 672 aaKnown RBP25.6■■□□□ 1.69
CSNK1D-216ENST00000581108 RPAP3Q9H6T3 665 aaPredicted RBP25.6■■□□□ 1.69
CSNK1D-216ENST00000581108 CNMDO75829 334 aa25.59■■□□□ 1.69
CSNK1D-216ENST00000581108 CYP2B6P20813 491 aa25.59■■□□□ 1.69
CSNK1D-216ENST00000581108 MAPK4P31152 587 aa25.59■■□□□ 1.69
CSNK1D-216ENST00000581108 OTUD7AQ8TE49 926 aaPredicted RBP25.59■■□□□ 1.69
CSNK1D-216ENST00000581108 OSBP2Q969R2 916 aa25.59■■□□□ 1.69
CSNK1D-216ENST00000581108 DEFB118Q96PH6 123 aa25.59■■□□□ 1.69
CSNK1D-216ENST00000581108 RABGAP1Q9Y3P9 1069 aa25.59■■□□□ 1.69
CSNK1D-216ENST00000581108 CEP290O15078 2479 aa25.58■■□□□ 1.69
CSNK1D-216ENST00000581108 RNF113AO15541 343 aaKnown RBP25.58■■□□□ 1.69
CSNK1D-216ENST00000581108 TRIM32Q13049 653 aa25.58■■□□□ 1.69
CSNK1D-216ENST00000581108 C16orf86Q6ZW13 317 aa25.58■■□□□ 1.69
CSNK1D-216ENST00000581108 CLEC10AQ8IUN9 316 aa25.58■■□□□ 1.69
CSNK1D-216ENST00000581108 SIAH1Q8IUQ4 282 aa25.58■■□□□ 1.69
CSNK1D-216ENST00000581108 CCAR1Q8IX12 1150 aaKnown RBP25.58■■□□□ 1.69
CSNK1D-216ENST00000581108 NUDT12Q9BQG2 462 aa25.58■■□□□ 1.69
CSNK1D-216ENST00000581108 PAK6Q9NQU5 681 aaPredicted RBP25.58■■□□□ 1.69
CSNK1D-216ENST00000581108 HMGCRP04035 888 aa25.57■■□□□ 1.68
CSNK1D-216ENST00000581108 GPR142Q7Z601 462 aa25.57■■□□□ 1.68
CSNK1D-216ENST00000581108 UBE2Q1Q7Z7E8 422 aa25.57■■□□□ 1.68
CSNK1D-216ENST00000581108 APPBP2Q92624 585 aa25.57■■□□□ 1.68
CSNK1D-216ENST00000581108 GSG1L2A8MUP6 293 aa25.56■■□□□ 1.68
CSNK1D-216ENST00000581108 TFRCP02786 760 aaKnown RBP25.56■■□□□ 1.68
CSNK1D-216ENST00000581108 KIAA1755Q5JYT7 1200 aa25.56■■□□□ 1.68
CSNK1D-216ENST00000581108 TRIB2Q92519 343 aa25.56■■□□□ 1.68
CSNK1D-216ENST00000581108 CCDC17Q96LX7 622 aa25.56■■□□□ 1.68
CSNK1D-216ENST00000581108 BTBD7Q9P203 1132 aa25.56■■□□□ 1.68
CSNK1D-216ENST00000581108 TTC41PQ6P2S7 1318 aa25.56■■□□□ 1.68
CSNK1D-216ENST00000581108 SPDYE16A6NNV3 312 aaPredicted RBP25.55■■□□□ 1.68
CSNK1D-216ENST00000581108 SLC34A2O95436 690 aa25.55■■□□□ 1.68
CSNK1D-216ENST00000581108 LBX2Q6XYB7 198 aa25.55■■□□□ 1.68
CSNK1D-216ENST00000581108 PLEKHH3Q7Z736 793 aa25.55■■□□□ 1.68
CSNK1D-216ENST00000581108 PI4K2BQ8TCG2 481 aa25.55■■□□□ 1.68
CSNK1D-216ENST00000581108 SOCS4Q8WXH5 440 aa25.55■■□□□ 1.68
CSNK1D-216ENST00000581108 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.55■■□□□ 1.68
CSNK1D-216ENST00000581108 ZFYP08048 801 aaPredicted RBP25.54■■□□□ 1.68
CSNK1D-216ENST00000581108 XRCC5P13010 732 aaKnown RBP25.54■■□□□ 1.68
CSNK1D-216ENST00000581108 ICA1Q05084 483 aa25.54■■□□□ 1.68
CSNK1D-216ENST00000581108 USP6NLQ92738 828 aa25.54■■□□□ 1.68
CSNK1D-216ENST00000581108 ARHGEF10LQ9HCE6 1279 aa25.54■■□□□ 1.68
CSNK1D-216ENST00000581108 ARPP21Q9UBL0 812 aaPredicted RBP25.54■■□□□ 1.68
CSNK1D-216ENST00000581108 TMX2Q9Y320 296 aa25.54■■□□□ 1.68
CSNK1D-216ENST00000581108 RLFQ13129 1914 aa25.53■■□□□ 1.68
CSNK1D-216ENST00000581108 ERC2O15083 957 aa25.53■■□□□ 1.68
CSNK1D-216ENST00000581108 FARP2O94887 1054 aaPredicted RBP25.53■■□□□ 1.68
CSNK1D-216ENST00000581108 CCNA1P78396 465 aa25.53■■□□□ 1.68
CSNK1D-216ENST00000581108 COG2Q14746 738 aa25.53■■□□□ 1.68
CSNK1D-216ENST00000581108 MORN1Q5T089 497 aa25.53■■□□□ 1.68
CSNK1D-216ENST00000581108 TANGO6Q9C0B7 1094 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms