RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 DDX20Q9UHI6 824 aaKnown RBP12.16□□□□□ -0.46
RFFL-208ENST00000581039 IVNS1ABPQ9Y6Y0 642 aa12.16□□□□□ -0.46
RFFL-208ENST00000581039 ATAD5Q96QE3 1844 aa12.16□□□□□ -0.46
RFFL-208ENST00000581039 PNMA6EA0A0J9YXQ4 647 aa12.15□□□□□ -0.46
RFFL-208ENST00000581039 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
RFFL-208ENST00000581039 CNMDO75829 334 aa12.15□□□□□ -0.46
RFFL-208ENST00000581039 CYP2E1P05181 493 aaPredicted RBP12.15□□□□□ -0.46
RFFL-208ENST00000581039 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
RFFL-208ENST00000581039 ZNF697Q5TEC3 545 aa12.15□□□□□ -0.46
RFFL-208ENST00000581039 CATSPERGQ6ZRH7 1159 aa12.15□□□□□ -0.46
RFFL-208ENST00000581039 C12orf42Q96LP6 360 aa12.15□□□□□ -0.46
RFFL-208ENST00000581039 GUCD1Q96NT3 240 aa12.15□□□□□ -0.46
RFFL-208ENST00000581039 GPR108Q9NPR9 543 aa12.15□□□□□ -0.46
RFFL-208ENST00000581039 FLRT1Q9NZU1 646 aa12.15□□□□□ -0.46
RFFL-208ENST00000581039 DNM1LO00429 736 aa12.14□□□□□ -0.47
RFFL-208ENST00000581039 HOXC6P09630 235 aa12.14□□□□□ -0.47
RFFL-208ENST00000581039 CYP7A1P22680 504 aa12.14□□□□□ -0.47
RFFL-208ENST00000581039 USP5P45974 858 aa12.14□□□□□ -0.47
RFFL-208ENST00000581039 DYNLL1P63167 89 aaKnown RBP12.14□□□□□ -0.47
RFFL-208ENST00000581039 RAB3GAP1Q15042 981 aa12.14□□□□□ -0.47
RFFL-208ENST00000581039 TNNI3KQ59H18 835 aa12.14□□□□□ -0.47
RFFL-208ENST00000581039 TATDN1Q6P1N9 297 aa12.14□□□□□ -0.47
RFFL-208ENST00000581039 ARRDC4Q8NCT1 418 aa12.14□□□□□ -0.47
RFFL-208ENST00000581039 DBNDD2Q9BQY9 259 aa12.14□□□□□ -0.47
RFFL-208ENST00000581039 FPGT-TNNI3KV9GXZ4 949 aa12.14□□□□□ -0.47
RFFL-208ENST00000581039 CYP2C19P33261 490 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 ZAP70P43403 619 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 RTP1P59025 263 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 ABCB5Q2M3G0 1257 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
RFFL-208ENST00000581039 DPP9Q86TI2 863 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 TTC6Q86TZ1 520 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 CERS3Q8IU89 383 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 ZNF512BQ96KM6 892 aaPredicted RBP12.13□□□□□ -0.47
RFFL-208ENST00000581039 KIAA1683Q9H0B3 1180 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 CABP5Q9NP86 173 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 PIH1D3Q9NQM4 214 aaKnown RBP12.13□□□□□ -0.47
RFFL-208ENST00000581039 SERPINB13Q9UIV8 391 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 ATP11BQ9Y2G3 1177 aa12.13□□□□□ -0.47
RFFL-208ENST00000581039 VCAM1P19320 739 aa12.12□□□□□ -0.47
RFFL-208ENST00000581039 GRB14Q14449 540 aa12.12□□□□□ -0.47
RFFL-208ENST00000581039 GJC2Q5T442 439 aaPredicted RBP12.12□□□□□ -0.47
RFFL-208ENST00000581039 LBX2Q6XYB7 198 aa12.12□□□□□ -0.47
RFFL-208ENST00000581039 MIGA1Q8NAN2 632 aa12.12□□□□□ -0.47
RFFL-208ENST00000581039 NPLOC4Q8TAT6 608 aa12.12□□□□□ -0.47
RFFL-208ENST00000581039 ACER1Q8TDN7 264 aa12.12□□□□□ -0.47
RFFL-208ENST00000581039 FRAT1Q92837 279 aaPredicted RBP12.12□□□□□ -0.47
RFFL-208ENST00000581039 EHD4Q9H223 541 aa12.12□□□□□ -0.47
RFFL-208ENST00000581039 HOXC10Q9NYD6 342 aa12.12□□□□□ -0.47
RFFL-208ENST00000581039 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
RFFL-208ENST00000581039 KBTBD13C9JR72 458 aa12.11□□□□□ -0.47
RFFL-208ENST00000581039 STRNO43815 780 aa12.11□□□□□ -0.47
RFFL-208ENST00000581039 SURF6O75683 361 aaKnown RBP12.11□□□□□ -0.47
RFFL-208ENST00000581039 IDH1O75874 414 aaKnown RBP12.11□□□□□ -0.47
RFFL-208ENST00000581039 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
RFFL-208ENST00000581039 TRIM27P14373 513 aa12.11□□□□□ -0.47
RFFL-208ENST00000581039 SHHQ15465 462 aa12.11□□□□□ -0.47
RFFL-208ENST00000581039 SLC39A5Q6ZMH5 540 aa12.11□□□□□ -0.47
RFFL-208ENST00000581039 TRPV1Q8NER1 839 aa12.11□□□□□ -0.47
RFFL-208ENST00000581039 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
RFFL-208ENST00000581039 CDX2Q99626 313 aaPredicted RBP12.11□□□□□ -0.47
RFFL-208ENST00000581039 SEMA6BQ9H3T3 888 aa12.11□□□□□ -0.47
RFFL-208ENST00000581039 RPAP3Q9H6T3 665 aaPredicted RBP12.11□□□□□ -0.47
RFFL-208ENST00000581039 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
RFFL-208ENST00000581039 UNC80Q8N2C7 3258 aa12.11□□□□□ -0.47
RFFL-208ENST00000581039 SIPA1L1O43166 1804 aa12.1□□□□□ -0.47
RFFL-208ENST00000581039 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
RFFL-208ENST00000581039 CYBAP13498 195 aa12.1□□□□□ -0.47
RFFL-208ENST00000581039 ATP8B2P98198 1209 aa12.1□□□□□ -0.47
RFFL-208ENST00000581039 POLA2Q14181 598 aa12.1□□□□□ -0.47
RFFL-208ENST00000581039 COG2Q14746 738 aa12.1□□□□□ -0.47
RFFL-208ENST00000581039 MAGEB6Q8N7X4 407 aa12.1□□□□□ -0.47
RFFL-208ENST00000581039 SLC5A4Q9NY91 659 aa12.1□□□□□ -0.47
RFFL-208ENST00000581039 POLR3DP05423 398 aaPredicted RBP12.09□□□□□ -0.47
RFFL-208ENST00000581039 ADORA2AP29274 412 aa12.09□□□□□ -0.47
RFFL-208ENST00000581039 MAP3K12Q12852 859 aa12.09□□□□□ -0.47
RFFL-208ENST00000581039 C9orf50Q5SZB4 431 aa12.09□□□□□ -0.47
RFFL-208ENST00000581039 OLFML2BQ68BL8 750 aa12.09□□□□□ -0.47
RFFL-208ENST00000581039 MAFAQ8NHW3 353 aaPredicted RBP12.09□□□□□ -0.47
RFFL-208ENST00000581039 SSH3Q8TE77 659 aa12.09□□□□□ -0.47
RFFL-208ENST00000581039 BADQ92934 168 aa12.09□□□□□ -0.47
RFFL-208ENST00000581039 MOV10L1Q9BXT6 1211 aaKnown RBP12.09□□□□□ -0.47
RFFL-208ENST00000581039 CCDC8Q9H0W5 538 aaPredicted RBP12.09□□□□□ -0.47
RFFL-208ENST00000581039 DBNLQ9UJU6 430 aaKnown RBP12.09□□□□□ -0.47
RFFL-208ENST00000581039 TNNQ9UQP3 1299 aa12.09□□□□□ -0.47
RFFL-208ENST00000581039 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
RFFL-208ENST00000581039 SEPT4O43236 478 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 BCAR3O75815 825 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 IGHA2P01877 340 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 SHMT1P34896 483 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 ADCYAP1R1P41586 468 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 PLCD1P51178 756 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 SMAD3P84022 425 aaKnown RBP12.08□□□□□ -0.48
RFFL-208ENST00000581039 SEPT2Q15019 361 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 TRIM60Q495X7 471 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 ANO1Q5XXA6 986 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 TMED8Q6PL24 325 aaPredicted RBP12.08□□□□□ -0.48
RFFL-208ENST00000581039 SHCBP1Q8NEM2 672 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 TANGO6Q9C0B7 1094 aa12.08□□□□□ -0.48
RFFL-208ENST00000581039 SPATC1LQ9H0A9 340 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms