RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 C20orf194Q5TEA3 1177 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 POTEEQ6S8J3 1075 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 ACER1Q8TDN7 264 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 BOLA2Q9H3K6 86 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 PAG1Q9NWQ8 432 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 CDK5RAP2Q96SN8 1893 aa21.18■□□□□ 0.98
CSNK1D-214ENST00000580565 ERVK-9P63128 1117 aa21.17■□□□□ 0.98
CSNK1D-214ENST00000580565 ERVK-24P63145 666 aa21.17■□□□□ 0.98
CSNK1D-214ENST00000580565 CCAR1Q8IX12 1150 aaKnown RBP21.17■□□□□ 0.98
CSNK1D-214ENST00000580565 LCORLQ8N3X6 602 aa21.17■□□□□ 0.98
CSNK1D-214ENST00000580565 SDR42E1Q8WUS8 393 aa21.17■□□□□ 0.98
CSNK1D-214ENST00000580565 NUDT12Q9BQG2 462 aa21.17■□□□□ 0.98
CSNK1D-214ENST00000580565 PAGR1Q9BTK6 254 aa21.17■□□□□ 0.98
CSNK1D-214ENST00000580565 DCP1AQ9NPI6 582 aaPredicted RBP21.17■□□□□ 0.98
CSNK1D-214ENST00000580565 RPTORQ8N122 1335 aa21.16■□□□□ 0.98
CSNK1D-214ENST00000580565 CYP2B6P20813 491 aa21.16■□□□□ 0.98
CSNK1D-214ENST00000580565 GUCY1A2P33402 732 aa21.16■□□□□ 0.98
CSNK1D-214ENST00000580565 EVX2Q03828 476 aa21.16■□□□□ 0.98
CSNK1D-214ENST00000580565 TRIM32Q13049 653 aa21.16■□□□□ 0.98
CSNK1D-214ENST00000580565 SOCS4Q8WXH5 440 aa21.16■□□□□ 0.98
CSNK1D-214ENST00000580565 HAUS7Q99871 368 aa21.16■□□□□ 0.98
CSNK1D-214ENST00000580565 PORCNQ9H237 461 aa21.16■□□□□ 0.98
CSNK1D-214ENST00000580565 ARMT1Q9H993 441 aa21.16■□□□□ 0.98
CSNK1D-214ENST00000580565 HMX1Q9NP08 348 aaPredicted RBP21.16■□□□□ 0.98
CSNK1D-214ENST00000580565 XRCC5P13010 732 aaKnown RBP21.15■□□□□ 0.98
CSNK1D-214ENST00000580565 VCAM1P19320 739 aa21.15■□□□□ 0.98
CSNK1D-214ENST00000580565 ADD2P35612 726 aa21.15■□□□□ 0.98
CSNK1D-214ENST00000580565 SEPT2Q15019 361 aa21.15■□□□□ 0.98
CSNK1D-214ENST00000580565 CATSPERGQ6ZRH7 1159 aa21.15■□□□□ 0.98
CSNK1D-214ENST00000580565 TRIB2Q92519 343 aa21.15■□□□□ 0.98
CSNK1D-214ENST00000580565 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.15■□□□□ 0.98
CSNK1D-214ENST00000580565 RABGAP1Q9Y3P9 1069 aa21.15■□□□□ 0.98
CSNK1D-214ENST00000580565 NR2E3Q9Y5X4 410 aa21.15■□□□□ 0.98
CSNK1D-214ENST00000580565 CYP2D6P10635 497 aa21.14■□□□□ 0.97
CSNK1D-214ENST00000580565 SLFNL1Q499Z3 407 aa21.14■□□□□ 0.97
CSNK1D-214ENST00000580565 GPR142Q7Z601 462 aa21.14■□□□□ 0.97
CSNK1D-214ENST00000580565 PLEKHH3Q7Z736 793 aa21.14■□□□□ 0.97
CSNK1D-214ENST00000580565 USP6NLQ92738 828 aa21.14■□□□□ 0.97
CSNK1D-214ENST00000580565 LRRCC1Q9C099 1032 aa21.14■□□□□ 0.97
CSNK1D-214ENST00000580565 MPHOSPH10O00566 681 aaKnown RBP21.13■□□□□ 0.97
CSNK1D-214ENST00000580565 PRKAB2O43741 272 aa21.13■□□□□ 0.97
CSNK1D-214ENST00000580565 CNMDO75829 334 aa21.13■□□□□ 0.97
CSNK1D-214ENST00000580565 MBD4O95243 580 aa21.13■□□□□ 0.97
CSNK1D-214ENST00000580565 FXR1P51114 621 aaKnown RBP eCLIP21.13■□□□□ 0.97
CSNK1D-214ENST00000580565 MORN1Q5T089 497 aa21.13■□□□□ 0.97
CSNK1D-214ENST00000580565 CHRDL2Q6WN34 429 aa21.13■□□□□ 0.97
CSNK1D-214ENST00000580565 TRMT44Q8IYL2 757 aaKnown RBP21.13■□□□□ 0.97
CSNK1D-214ENST00000580565 PAWRQ96IZ0 340 aaKnown RBP21.13■□□□□ 0.97
CSNK1D-214ENST00000580565 CCNA1P78396 465 aa21.12■□□□□ 0.97
CSNK1D-214ENST00000580565 MAP3K21Q5TCX8 1036 aa21.12■□□□□ 0.97
CSNK1D-214ENST00000580565 ANKLE1Q8NAG6 615 aa21.12■□□□□ 0.97
CSNK1D-214ENST00000580565 RPAP3Q9H6T3 665 aaPredicted RBP21.12■□□□□ 0.97
CSNK1D-214ENST00000580565 ATP8A2Q9NTI2 1148 aa21.12■□□□□ 0.97
CSNK1D-214ENST00000580565 SWAP70Q9UH65 585 aa21.12■□□□□ 0.97
CSNK1D-214ENST00000580565 A0A1W2PRG0 241 aa21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 SMARCA5O60264 1052 aaPredicted RBP21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 EVI5O60447 810 aa21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 PRKAR2AP13861 404 aaKnown RBP21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 RGS2P41220 211 aa21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 LBX2Q6XYB7 198 aa21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 NECAB2Q7Z6G3 386 aa21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 SLC44A5Q8NCS7 719 aa21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 DYNLL2Q96FJ2 89 aa21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 CWC22Q9HCG8 908 aaKnown RBP21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 MYH1P12882 1939 aa21.11■□□□□ 0.97
CSNK1D-214ENST00000580565 CEP290O15078 2479 aa21.1■□□□□ 0.97
CSNK1D-214ENST00000580565 GLRX3O76003 335 aaKnown RBP21.1■□□□□ 0.97
CSNK1D-214ENST00000580565 CHGBP05060 677 aa21.1■□□□□ 0.97
CSNK1D-214ENST00000580565 ZKSCAN1P17029 563 aaPredicted RBP21.1■□□□□ 0.97
CSNK1D-214ENST00000580565 TMEM179Q6ZVK1 233 aa21.1■□□□□ 0.97
CSNK1D-214ENST00000580565 DIS3LQ8TF46 1054 aaKnown RBP21.1■□□□□ 0.97
CSNK1D-214ENST00000580565 BTBD7Q9P203 1132 aa21.1■□□□□ 0.97
CSNK1D-214ENST00000580565 CCL14Q16627 93 aa21.09■□□□□ 0.97
CSNK1D-214ENST00000580565 ZSCAN25Q6NSZ9 544 aa21.09■□□□□ 0.97
CSNK1D-214ENST00000580565 APBA2Q99767 749 aa21.09■□□□□ 0.97
CSNK1D-214ENST00000580565 SPDYE16A6NNV3 312 aaPredicted RBP21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 CACNB2Q08289 660 aaPredicted RBP21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 MAP2K5Q13163 448 aa21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 COG2Q14746 738 aa21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 DDX60LQ5H9U9 1706 aaKnown RBP21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 C12orf60Q5U649 245 aa21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 DOCK3Q8IZD9 2030 aa21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 NBPF3Q9H094 633 aa21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 ECHDC1Q9NTX5 307 aa21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 HOXC10Q9NYD6 342 aa21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 RBM27Q9P2N5 1060 aaKnown RBP21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 OGDHLQ9ULD0 1010 aa21.08■□□□□ 0.97
CSNK1D-214ENST00000580565 CYP2D7A0A087X1C5 515 aa21.07■□□□□ 0.96
CSNK1D-214ENST00000580565 SLC15A5A6NIM6 579 aa21.07■□□□□ 0.96
CSNK1D-214ENST00000580565 USP17L12C9JPN9 530 aa21.07■□□□□ 0.96
CSNK1D-214ENST00000580565 USP17L21D6R901 530 aa21.07■□□□□ 0.96
CSNK1D-214ENST00000580565 AKR1B1P15121 316 aa21.07■□□□□ 0.96
CSNK1D-214ENST00000580565 MNX1P50219 401 aaPredicted RBP21.07■□□□□ 0.96
CSNK1D-214ENST00000580565 WDR78Q5VTH9 848 aa21.07■□□□□ 0.96
CSNK1D-214ENST00000580565 SIAH1Q8IUQ4 282 aa21.07■□□□□ 0.96
CSNK1D-214ENST00000580565 AMOTL1Q8IY63 956 aa21.07■□□□□ 0.96
CSNK1D-214ENST00000580565 DDRGK1Q96HY6 314 aa21.07■□□□□ 0.96
CSNK1D-214ENST00000580565 DCTPP1Q9H773 170 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms