RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 SMAD3P84022 425 aaKnown RBP23.7■■□□□ 1.38
LIMD2-209ENST00000580222 METTL16Q86W50 562 aaKnown RBP23.7■■□□□ 1.38
LIMD2-209ENST00000580222 CHMP4BQ9H444 224 aaKnown RBP23.7■■□□□ 1.38
LIMD2-209ENST00000580222 RAI14Q9P0K7 980 aa23.7■■□□□ 1.38
LIMD2-209ENST00000580222 PRKAG2Q9UGJ0 569 aa23.7■■□□□ 1.38
LIMD2-209ENST00000580222 ATAD5Q96QE3 1844 aa23.69■■□□□ 1.38
LIMD2-209ENST00000580222 TRIM43BA6NCK2 446 aa23.69■■□□□ 1.38
LIMD2-209ENST00000580222 FOSL2P15408 326 aa23.69■■□□□ 1.38
LIMD2-209ENST00000580222 PTPREP23469 700 aa23.69■■□□□ 1.38
LIMD2-209ENST00000580222 GSTO1P78417 241 aa23.69■■□□□ 1.38
LIMD2-209ENST00000580222 SLC39A5Q6ZMH5 540 aa23.69■■□□□ 1.38
LIMD2-209ENST00000580222 SPATA5Q8NB90 893 aa23.69■■□□□ 1.38
LIMD2-209ENST00000580222 TRIM43Q96BQ3 446 aaPredicted RBP23.69■■□□□ 1.38
LIMD2-209ENST00000580222 CRBNQ96SW2 442 aa23.69■■□□□ 1.38
LIMD2-209ENST00000580222 ZBTB21Q9ULJ3 1066 aa23.69■■□□□ 1.38
LIMD2-209ENST00000580222 ANO1Q5XXA6 986 aa23.68■■□□□ 1.38
LIMD2-209ENST00000580222 MAPKAPK5Q8IW41 473 aa23.68■■□□□ 1.38
LIMD2-209ENST00000580222 PRDM5Q9NQX1 630 aaPredicted RBP23.68■■□□□ 1.38
LIMD2-209ENST00000580222 PALD1Q9ULE6 856 aa23.68■■□□□ 1.38
LIMD2-209ENST00000580222 RABGAP1Q9Y3P9 1069 aa23.68■■□□□ 1.38
LIMD2-209ENST00000580222 SIPA1L1O43166 1804 aa23.68■■□□□ 1.38
LIMD2-209ENST00000580222 SLC15A5A6NIM6 579 aa23.67■■□□□ 1.38
LIMD2-209ENST00000580222 GNAI2P04899 355 aa23.67■■□□□ 1.38
LIMD2-209ENST00000580222 ITGB8P26012 769 aa23.67■■□□□ 1.38
LIMD2-209ENST00000580222 EPHB4P54760 987 aa23.67■■□□□ 1.38
LIMD2-209ENST00000580222 TRIM60Q495X7 471 aa23.67■■□□□ 1.38
LIMD2-209ENST00000580222 TGFBRAP1Q8WUH2 860 aa23.67■■□□□ 1.38
LIMD2-209ENST00000580222 PDLIM7Q9NR12 457 aa23.67■■□□□ 1.38
LIMD2-209ENST00000580222 BTBD7Q9P203 1132 aa23.67■■□□□ 1.38
LIMD2-209ENST00000580222 LTBP2Q14767 1821 aa23.67■■□□□ 1.38
LIMD2-209ENST00000580222 HOXC6P09630 235 aa23.66■■□□□ 1.38
LIMD2-209ENST00000580222 IRX6P78412 446 aaPredicted RBP23.66■■□□□ 1.38
LIMD2-209ENST00000580222 ATP2B2Q01814 1243 aa23.66■■□□□ 1.38
LIMD2-209ENST00000580222 ZYXQ15942 572 aaKnown RBP23.66■■□□□ 1.38
LIMD2-209ENST00000580222 WDR78Q5VTH9 848 aa23.66■■□□□ 1.38
LIMD2-209ENST00000580222 USP17L2Q6R6M4 530 aa23.66■■□□□ 1.38
LIMD2-209ENST00000580222 ADGRA1Q86SQ6 560 aa23.66■■□□□ 1.38
LIMD2-209ENST00000580222 NEUROD6Q96NK8 337 aa23.66■■□□□ 1.38
LIMD2-209ENST00000580222 DHX36Q9H2U1 1008 aaKnown RBP23.66■■□□□ 1.38
LIMD2-209ENST00000580222 CWC22Q9HCG8 908 aaKnown RBP23.66■■□□□ 1.38
LIMD2-209ENST00000580222 AATFQ9NY61 560 aaKnown RBP eCLIP23.66■■□□□ 1.38
LIMD2-209ENST00000580222 CYBAP13498 195 aa23.65■■□□□ 1.38
LIMD2-209ENST00000580222 GRIN2CQ14957 1233 aa23.65■■□□□ 1.38
LIMD2-209ENST00000580222 FOXP4Q8IVH2 680 aaPredicted RBP23.65■■□□□ 1.38
LIMD2-209ENST00000580222 GTF3C2Q8WUA4 911 aaPredicted RBP23.65■■□□□ 1.38
LIMD2-209ENST00000580222 SYMPKQ92797 1274 aaKnown RBP23.65■■□□□ 1.38
LIMD2-209ENST00000580222 C1orf115Q9H7X2 142 aa23.65■■□□□ 1.38
LIMD2-209ENST00000580222 FRMPD3Q5JV73 1810 aa23.64■■□□□ 1.38
LIMD2-209ENST00000580222 MSCO60682 206 aa23.64■■□□□ 1.37
LIMD2-209ENST00000580222 MCAMP43121 646 aa23.64■■□□□ 1.37
LIMD2-209ENST00000580222 GRB14Q14449 540 aa23.64■■□□□ 1.37
LIMD2-209ENST00000580222 SNX17Q15036 470 aa23.64■■□□□ 1.37
LIMD2-209ENST00000580222 SAP30BPQ9UHR5 308 aaKnown RBP23.64■■□□□ 1.37
LIMD2-209ENST00000580222 FLT1P17948 1338 aa23.63■■□□□ 1.37
LIMD2-209ENST00000580222 GH2P01242 217 aa23.63■■□□□ 1.37
LIMD2-209ENST00000580222 CATSPERGQ6ZRH7 1159 aa23.63■■□□□ 1.37
LIMD2-209ENST00000580222 AKAP2Q9Y2D5 859 aa23.63■■□□□ 1.37
LIMD2-209ENST00000580222 USP17L15C9J2P7 530 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 USP17L13C9JLJ4 530 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 USP17L11C9JVI0 530 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 USP17L18D6R9N7 530 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 USP17L22D6RA61 530 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 USP17L17D6RBQ6 530 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 USP17L19D6RCP7 530 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 USP17L20D6RJB6 530 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 TNFRSF10AO00220 468 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 GLRX3O76003 335 aaKnown RBP23.62■■□□□ 1.37
LIMD2-209ENST00000580222 ARID4AP29374 1257 aaPredicted RBP23.62■■□□□ 1.37
LIMD2-209ENST00000580222 ADCYAP1R1P41586 468 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 USP17L24Q0WX57 530 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 TJAP1Q5JTD0 557 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 CRACR2BQ8N4Y2 399 aaPredicted RBP23.62■■□□□ 1.37
LIMD2-209ENST00000580222 FERMT2Q96AC1 680 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 C12orf42Q96LP6 360 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 LRP2BPQ9P2M1 347 aa23.62■■□□□ 1.37
LIMD2-209ENST00000580222 PPP4CP60510 307 aa23.61■■□□□ 1.37
LIMD2-209ENST00000580222 CCNA1P78396 465 aa23.61■■□□□ 1.37
LIMD2-209ENST00000580222 PRAMEF19Q5SWL8 479 aa23.61■■□□□ 1.37
LIMD2-209ENST00000580222 ARRDC4Q8NCT1 418 aa23.61■■□□□ 1.37
LIMD2-209ENST00000580222 ACER1Q8TDN7 264 aa23.61■■□□□ 1.37
LIMD2-209ENST00000580222 SNRKQ9NRH2 765 aa23.61■■□□□ 1.37
LIMD2-209ENST00000580222 GINM1Q9NU53 330 aa23.61■■□□□ 1.37
LIMD2-209ENST00000580222 ZBTB40Q9NUA8 1239 aa23.61■■□□□ 1.37
LIMD2-209ENST00000580222 MYCNP04198 464 aaPredicted RBP23.6■■□□□ 1.37
LIMD2-209ENST00000580222 TLE2Q04725 743 aa23.6■■□□□ 1.37
LIMD2-209ENST00000580222 EXOC6Q8TAG9 804 aa23.59■■□□□ 1.37
LIMD2-209ENST00000580222 CHD9Q3L8U1 2897 aa23.58■■□□□ 1.37
LIMD2-209ENST00000580222 SPDYE16A6NNV3 312 aaPredicted RBP23.58■■□□□ 1.37
LIMD2-209ENST00000580222 KBTBD13C9JR72 458 aa23.58■■□□□ 1.37
LIMD2-209ENST00000580222 COBLO75128 1261 aa23.58■■□□□ 1.37
LIMD2-209ENST00000580222 NEFLP07196 543 aa23.58■■□□□ 1.37
LIMD2-209ENST00000580222 VCAM1P19320 739 aa23.58■■□□□ 1.37
LIMD2-209ENST00000580222 DYNLL1P63167 89 aaKnown RBP23.58■■□□□ 1.37
LIMD2-209ENST00000580222 GORABQ5T7V8 394 aa23.58■■□□□ 1.37
LIMD2-209ENST00000580222 NAA16Q6N069 864 aaPredicted RBP23.58■■□□□ 1.37
LIMD2-209ENST00000580222 LBX2Q6XYB7 198 aa23.58■■□□□ 1.37
LIMD2-209ENST00000580222 TRIM34Q9BYJ4 488 aa23.58■■□□□ 1.37
LIMD2-209ENST00000580222 IVNS1ABPQ9Y6Y0 642 aa23.58■■□□□ 1.37
LIMD2-209ENST00000580222 RLFQ13129 1914 aa23.57■■□□□ 1.36
LIMD2-209ENST00000580222 SRGAP3O43295 1099 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms