RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 WDR78Q5VTH9 848 aa21.74■■□□□ 1.07
MKS1-209ENST00000580127 MFSD14CQ5VZR4 134 aa21.74■■□□□ 1.07
MKS1-209ENST00000580127 AACSQ86V21 672 aa21.74■■□□□ 1.07
MKS1-209ENST00000580127 APBA2Q99767 749 aa21.74■■□□□ 1.07
MKS1-209ENST00000580127 KIAA1683Q9H0B3 1180 aa21.74■■□□□ 1.07
MKS1-209ENST00000580127 MYO5AQ9Y4I1 1855 aaKnown RBP21.74■■□□□ 1.07
MKS1-209ENST00000580127 HNRNPUQ00839 825 aaKnown RBP eCLIP21.73■■□□□ 1.07
MKS1-209ENST00000580127 MAP2K5Q13163 448 aa21.73■■□□□ 1.07
MKS1-209ENST00000580127 ZYXQ15942 572 aaKnown RBP21.73■■□□□ 1.07
MKS1-209ENST00000580127 GPR153Q6NV75 609 aa21.73■■□□□ 1.07
MKS1-209ENST00000580127 CATSPERGQ6ZRH7 1159 aa21.73■■□□□ 1.07
MKS1-209ENST00000580127 USP6NLQ92738 828 aa21.73■■□□□ 1.07
MKS1-209ENST00000580127 GDF15Q99988 308 aa21.73■■□□□ 1.07
MKS1-209ENST00000580127 PORCNQ9H237 461 aa21.73■■□□□ 1.07
MKS1-209ENST00000580127 ZMYND8Q9ULU4 1186 aaPredicted RBP21.73■■□□□ 1.07
MKS1-209ENST00000580127 SIPA1L1O43166 1804 aa21.72■■□□□ 1.07
MKS1-209ENST00000580127 MAGEB6P1A0A0J9YX57 407 aa21.72■■□□□ 1.07
MKS1-209ENST00000580127 SLC15A5A6NIM6 579 aa21.72■■□□□ 1.07
MKS1-209ENST00000580127 CRNKL1Q9BZJ0 848 aaKnown RBP21.72■■□□□ 1.07
MKS1-209ENST00000580127 HOXC10Q9NYD6 342 aa21.72■■□□□ 1.07
MKS1-209ENST00000580127 TLR7Q9NYK1 1049 aaKnown RBP21.72■■□□□ 1.07
MKS1-209ENST00000580127 ATP2B2Q01814 1243 aa21.71■■□□□ 1.07
MKS1-209ENST00000580127 SLC17A8Q8NDX2 589 aa21.71■■□□□ 1.07
MKS1-209ENST00000580127 PLXNB2O15031 1838 aa21.71■■□□□ 1.07
MKS1-209ENST00000580127 MSCO60682 206 aa21.7■■□□□ 1.06
MKS1-209ENST00000580127 PEX10O60683 326 aa21.7■■□□□ 1.06
MKS1-209ENST00000580127 SHROOM1Q2M3G4 852 aaPredicted RBP21.7■■□□□ 1.06
MKS1-209ENST00000580127 CEP85Q6P2H3 762 aa21.7■■□□□ 1.06
MKS1-209ENST00000580127 CLASRPQ8N2M8 674 aaKnown RBP21.7■■□□□ 1.06
MKS1-209ENST00000580127 EXOC6BQ9Y2D4 811 aa21.7■■□□□ 1.06
MKS1-209ENST00000580127 MNX1P50219 401 aaPredicted RBP21.69■■□□□ 1.06
MKS1-209ENST00000580127 SLC9C2Q5TAH2 1124 aa21.69■■□□□ 1.06
MKS1-209ENST00000580127 LBX2Q6XYB7 198 aa21.69■■□□□ 1.06
MKS1-209ENST00000580127 UBE2OQ9C0C9 1292 aaKnown RBP21.69■■□□□ 1.06
MKS1-209ENST00000580127 STRNO43815 780 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 HMMRO75330 724 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 SYN1P17600 705 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 VCAM1P19320 739 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 PTPREP23469 700 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 CCND3P30281 292 aaPredicted RBP21.68■■□□□ 1.06
MKS1-209ENST00000580127 COG2Q14746 738 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 CCL14Q16627 93 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 LHX8Q68G74 356 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 ANTXR1Q9H6X2 564 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 MCM9Q9NXL9 1143 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 SLC5A4Q9NY91 659 aa21.68■■□□□ 1.06
MKS1-209ENST00000580127 RANBP2P49792 3224 aaKnown RBP21.67■■□□□ 1.06
MKS1-209ENST00000580127 ALPK3Q96L96 1907 aa21.67■■□□□ 1.06
MKS1-209ENST00000580127 DDX60LQ5H9U9 1706 aaKnown RBP21.67■■□□□ 1.06
MKS1-209ENST00000580127 MPHOSPH10O00566 681 aaKnown RBP21.67■■□□□ 1.06
MKS1-209ENST00000580127 IFIT2P09913 472 aaKnown RBP21.67■■□□□ 1.06
MKS1-209ENST00000580127 RLBP1P12271 317 aa21.67■■□□□ 1.06
MKS1-209ENST00000580127 CNGA1P29973 690 aa21.67■■□□□ 1.06
MKS1-209ENST00000580127 MAGEA10P43363 369 aaPredicted RBP21.67■■□□□ 1.06
MKS1-209ENST00000580127 PLCD1P51178 756 aa21.67■■□□□ 1.06
MKS1-209ENST00000580127 TDHQ8IZJ6 230 aa21.67■■□□□ 1.06
MKS1-209ENST00000580127 CHMP4BQ9H444 224 aaKnown RBP21.67■■□□□ 1.06
MKS1-209ENST00000580127 RPAP3Q9H6T3 665 aaPredicted RBP21.67■■□□□ 1.06
MKS1-209ENST00000580127 NDUFB9Q9Y6M9 179 aa21.67■■□□□ 1.06
MKS1-209ENST00000580127 COL6A1P12109 1028 aa21.66■■□□□ 1.06
MKS1-209ENST00000580127 SHMT1P34896 483 aa21.66■■□□□ 1.06
MKS1-209ENST00000580127 LRIT3Q3SXY7 679 aa21.66■■□□□ 1.06
MKS1-209ENST00000580127 DPP9Q86TI2 863 aa21.66■■□□□ 1.06
MKS1-209ENST00000580127 AMOTL1Q8IY63 956 aa21.66■■□□□ 1.06
MKS1-209ENST00000580127 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
MKS1-209ENST00000580127 ACER1Q8TDN7 264 aa21.66■■□□□ 1.06
MKS1-209ENST00000580127 LRCH3Q96II8 777 aa21.66■■□□□ 1.06
MKS1-209ENST00000580127 RIOK1Q9BRS2 568 aaKnown RBP21.66■■□□□ 1.06
MKS1-209ENST00000580127 SOX1O00570 391 aaPredicted RBP21.65■■□□□ 1.06
MKS1-209ENST00000580127 HOXC6P09630 235 aa21.65■■□□□ 1.06
MKS1-209ENST00000580127 RPAP2Q8IXW5 612 aaPredicted RBP21.65■■□□□ 1.06
MKS1-209ENST00000580127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.65■■□□□ 1.06
MKS1-209ENST00000580127 KIF1BPQ96EK5 621 aa21.65■■□□□ 1.06
MKS1-209ENST00000580127 LBHD1Q9BQE6 289 aaPredicted RBP21.65■■□□□ 1.06
MKS1-209ENST00000580127 IL1RAPL2Q9NP60 686 aa21.65■■□□□ 1.06
MKS1-209ENST00000580127 SWAP70Q9UH65 585 aa21.65■■□□□ 1.06
MKS1-209ENST00000580127 CNMDO75829 334 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 PDE6AP16499 860 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 SEPT2Q15019 361 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 DEFB123Q8N688 67 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 MB21D1Q8N884 522 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 ARRDC4Q8NCT1 418 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 LPAR1Q92633 364 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 DDRGK1Q96HY6 314 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 TANGO6Q9C0B7 1094 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 SENP6Q9GZR1 1112 aaPredicted RBP21.64■■□□□ 1.05
MKS1-209ENST00000580127 SH2D4AQ9H788 454 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 PRKAG2Q9UGJ0 569 aa21.64■■□□□ 1.05
MKS1-209ENST00000580127 PFASO15067 1338 aa21.63■■□□□ 1.05
MKS1-209ENST00000580127 POTEEQ6S8J3 1075 aa21.63■■□□□ 1.05
MKS1-209ENST00000580127 TMEM179Q6ZVK1 233 aa21.63■■□□□ 1.05
MKS1-209ENST00000580127 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.63■■□□□ 1.051e-6■■■■■ 38.5
MKS1-209ENST00000580127 ARHGEF10LQ9HCE6 1279 aa21.63■■□□□ 1.05
MKS1-209ENST00000580127 BTBD7Q9P203 1132 aa21.63■■□□□ 1.05
MKS1-209ENST00000580127 DDX20Q9UHI6 824 aaKnown RBP21.63■■□□□ 1.05
MKS1-209ENST00000580127 ZNF532Q9HCE3 1301 aa21.62■■□□□ 1.05
MKS1-209ENST00000580127 SPDYE16A6NNV3 312 aaPredicted RBP21.62■■□□□ 1.05
MKS1-209ENST00000580127 GOLIM4O00461 696 aa21.62■■□□□ 1.05
MKS1-209ENST00000580127 RAB11FIP3O75154 756 aa21.62■■□□□ 1.05
MKS1-209ENST00000580127 GABPAQ06546 454 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms