RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 CDC42BPBQ9Y5S2 1711 aa11.46□□□□□ -0.57
MSI2-209ENST00000579483 CLTCQ00610 1675 aaKnown RBP11.46□□□□□ -0.57
MSI2-209ENST00000579483 GOLGA6L10A0A0M3HER8 536 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 VWA3AA6NCI4 1184 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 SMCO2A6NFE2 343 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 TXKP42681 527 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 YWHAEP62258 255 aaKnown RBP11.46□□□□□ -0.58
MSI2-209ENST00000579483 ODR4Q5SWX8 454 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 FBXO41Q8TF61 875 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 FAM193BQ96PV7 902 aaPredicted RBP11.46□□□□□ -0.58
MSI2-209ENST00000579483 FBXO40Q9UH90 709 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 LAMC1P11047 1609 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 COPB2P35606 906 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 SNX29Q8TEQ0 813 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 CPLX3Q8WVH0 158 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 FAM227BQ96M60 508 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 TSNARE1Q96NA8 513 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 TNNQ9UQP3 1299 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 MROH2AA6NES4 1674 aa11.46□□□□□ -0.58
MSI2-209ENST00000579483 KIF4BQ2VIQ3 1234 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 DEPTORQ8TB45 409 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 EAF2Q96CJ1 260 aaPredicted RBP11.45□□□□□ -0.58
MSI2-209ENST00000579483 USP26Q9BXU7 913 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 PROSER3Q2NL68 480 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 UVSSAQ2YD98 709 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 MAP9Q49MG5 647 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 ELP1O95163 1332 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 PSDA5PKW4 1024 aaPredicted RBP11.45□□□□□ -0.58
MSI2-209ENST00000579483 KLRF2D3W0D1 207 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 FMNL1O95466 1100 aaPredicted RBP11.45□□□□□ -0.58
MSI2-209ENST00000579483 NEK11Q8NG66 645 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 COA7Q96BR5 231 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
MSI2-209ENST00000579483 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
MSI2-209ENST00000579483 HARSP12081 509 aaKnown RBP11.45□□□□□ -0.58
MSI2-209ENST00000579483 MTERF4Q7Z6M4 381 aaKnown RBP11.45□□□□□ -0.58
MSI2-209ENST00000579483 SOS2Q07890 1332 aaPredicted RBP11.45□□□□□ -0.58
MSI2-209ENST00000579483 H7C1W4 665 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 CETN3O15182 167 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 TTLL11Q8NHH1 800 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 CRAMP1Q96RY5 1269 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 TEKT3Q9BXF9 490 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 SUGT1Q9Y2Z0 365 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 E7EWF7 191 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 TFDP1Q14186 410 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 XPOTO43592 962 aaKnown RBP11.44□□□□□ -0.58
MSI2-209ENST00000579483 SKIDA1Q1XH10 827 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 VWA3BQ502W6 1294 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 CLTCL1P53675 1640 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 ECE2O60344 883 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 BMP3P12645 472 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 ATF7P17544 494 aaPredicted RBP11.44□□□□□ -0.58
MSI2-209ENST00000579483 ABCD1P33897 745 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 SLC17A8Q8NDX2 589 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 TTC16Q8NEE8 873 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 DLC1Q96QB1 1528 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 MED23Q9ULK4 1368 aa11.44□□□□□ -0.58
MSI2-209ENST00000579483 SSH2Q76I76 1423 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 DDX39AO00148 427 aaKnown RBP11.43□□□□□ -0.58
MSI2-209ENST00000579483 DPH6Q7L8W6 267 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 ZNF274Q96GC6 653 aaPredicted RBP11.43□□□□□ -0.58
MSI2-209ENST00000579483 SPHKAPQ2M3C7 1700 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 ARHGEF37A1IGU5 675 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 CUTAO60888 179 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 YARSP54577 528 aaKnown RBP11.43□□□□□ -0.58
MSI2-209ENST00000579483 SDR42E1Q8WUS8 393 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 TNKSO95271 1327 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 CEP170BQ9Y4F5 1589 aaPredicted RBP11.43□□□□□ -0.58
MSI2-209ENST00000579483 TRAF5O00463 557 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 ATP6V0A1Q93050 837 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 HOXC10Q9NYD6 342 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 FRMPD1Q5SYB0 1578 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 MYZAPP0CAP1 466 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 UBASH3AP57075 661 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 TMEM179Q6ZVK1 233 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 ABI1Q8IZP0 508 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 LRRC47Q8N1G4 583 aaKnown RBP11.43□□□□□ -0.58
MSI2-209ENST00000579483 RETREG2Q8NC44 543 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.43□□□□□ -0.58
MSI2-209ENST00000579483 NACA2Q9H009 215 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 PCDHA1Q9Y5I3 950 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
MSI2-209ENST00000579483 FDX1P10109 184 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 PPP2R5AQ15172 486 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 TAX1BP1Q86VP1 789 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 ZNF215Q9UL58 517 aaPredicted RBP11.42□□□□□ -0.58
MSI2-209ENST00000579483 SMC1AQ14683 1233 aaKnown RBP11.42□□□□□ -0.58
MSI2-209ENST00000579483 PTPN14Q15678 1187 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 ANO1Q5XXA6 986 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 METTL13Q8N6R0 699 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 FANCBQ8NB91 859 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 GOLGA5Q8TBA6 731 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 SELENOOQ9BVL4 669 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 ZNRF3Q9ULT6 936 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 ZNF853P0CG23 659 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 CASQ1P31415 396 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 NFIXQ14938 502 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 KIAA0753Q2KHM9 967 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 TMC6Q7Z403 805 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms