RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 IL25Q9H293 177 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 ZFYVE28Q9HCC9 887 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 TMOD4Q9NZQ9 345 aa11.94□□□□□ -0.5
MKS1-208ENST00000579358 PLIN4Q96Q06 1357 aa11.93□□□□□ -0.5
MKS1-208ENST00000579358 GPR25O00155 361 aa11.93□□□□□ -0.5
MKS1-208ENST00000579358 SGSM2O43147 1006 aa11.93□□□□□ -0.5
MKS1-208ENST00000579358 PCP11498 1178 aaKnown RBP11.93□□□□□ -0.5
MKS1-208ENST00000579358 NT5C2P49902 561 aa11.93□□□□□ -0.5
MKS1-208ENST00000579358 ICA1Q05084 483 aa11.93□□□□□ -0.5
MKS1-208ENST00000579358 PABPC4Q13310 644 aaKnown RBP eCLIP11.93□□□□□ -0.5
MKS1-208ENST00000579358 USP17L2Q6R6M4 530 aa11.93□□□□□ -0.5
MKS1-208ENST00000579358 ZNF444Q8N0Y2 327 aaPredicted RBP11.93□□□□□ -0.5
MKS1-208ENST00000579358 PARK7Q99497 189 aaKnown RBP11.93□□□□□ -0.5
MKS1-208ENST00000579358 FEZ1Q99689 392 aa11.93□□□□□ -0.5
MKS1-208ENST00000579358 KANSL2Q9H9L4 492 aa11.93□□□□□ -0.5
MKS1-208ENST00000579358 PNMA3Q9UL41 463 aa11.93□□□□□ -0.5
MKS1-208ENST00000579358 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.93□□□□□ -0.5
MKS1-208ENST00000579358 TLR2O60603 784 aa11.92□□□□□ -0.5
MKS1-208ENST00000579358 FGRP09769 529 aa11.92□□□□□ -0.5
MKS1-208ENST00000579358 R3HDMLQ9H3Y0 253 aa11.92□□□□□ -0.5
MKS1-208ENST00000579358 SH2D4AQ9H788 454 aa11.92□□□□□ -0.5
MKS1-208ENST00000579358 ARHGEF10LQ9HCE6 1279 aa11.92□□□□□ -0.5
MKS1-208ENST00000579358 CTNNA3Q9UI47 895 aa11.92□□□□□ -0.5
MKS1-208ENST00000579358 ADGRA2Q96PE1 1338 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 PHIPQ8WWQ0 1821 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 IGKV6D-41A0A0C4DH26 115 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 ZNF213O14771 459 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 ORC4O43929 436 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 FKTNO75072 461 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 PRDM1O75626 825 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 HOXA7P31268 230 aaPredicted RBP11.91□□□□□ -0.5
MKS1-208ENST00000579358 CTDSPL2Q05D32 466 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 TREML2Q5T2D2 321 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 STK11IPQ8N1F8 1099 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 NEDD1Q8NHV4 660 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 ACER1Q8TDN7 264 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 ZNF296Q8WUU4 475 aaPredicted RBP11.91□□□□□ -0.5
MKS1-208ENST00000579358 STAG1Q8WVM7 1258 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
MKS1-208ENST00000579358 RNF41Q9H4P4 317 aaPredicted RBP11.91□□□□□ -0.5
MKS1-208ENST00000579358 EMILIN3Q9NT22 766 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 NYAP2Q9P242 653 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 SYNPO2Q9UMS6 1093 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 TMX2Q9Y320 296 aa11.91□□□□□ -0.5
MKS1-208ENST00000579358 BAZ2AQ9UIF9 1905 aaKnown RBP11.91□□□□□ -0.5
MKS1-208ENST00000579358 ATAD5Q96QE3 1844 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 LOC285556D6RIA3 1793 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 A0A1W2PRG0 241 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 CDC45O75419 566 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 TSPY3P0CV98 308 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 TSPY8P0CW00 308 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 OSBPP22059 807 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 DGKZQ13574 1117 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 ZYXQ15942 572 aaKnown RBP11.9□□□□□ -0.5
MKS1-208ENST00000579358 IMMTQ16891 758 aaKnown RBP11.9□□□□□ -0.5
MKS1-208ENST00000579358 PPP4R3BQ5MIZ7 849 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 AKNAD1Q5T1N1 836 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 CASC1Q6TDU7 716 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 SIAH1Q8IUQ4 282 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 LPAR1Q92633 364 aa11.9□□□□□ -0.5
MKS1-208ENST00000579358 PCNTO95613 3336 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 TSPY2A6NKD2 308 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 CYP2C8P10632 490 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 EEF2P13639 858 aaKnown RBP11.89□□□□□ -0.51
MKS1-208ENST00000579358 VCAM1P19320 739 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 HAND2P61296 217 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 TFAP4Q01664 338 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 SP3Q02447 781 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 CLEC10AQ8IUN9 316 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 TBC1D10CQ8IV04 446 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 SMCR8Q8TEV9 937 aaPredicted RBP11.89□□□□□ -0.51
MKS1-208ENST00000579358 GTF3C2Q8WUA4 911 aaPredicted RBP11.89□□□□□ -0.51
MKS1-208ENST00000579358 ERO1AQ96HE7 468 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 VCPKMTQ9H867 229 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 MTMR4Q9NYA4 1195 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 TACC3Q9Y6A5 838 aa11.89□□□□□ -0.51
MKS1-208ENST00000579358 U3KPZ7 1027 aaPredicted RBP11.89□□□□□ -0.51
MKS1-208ENST00000579358 USP17L15C9J2P7 530 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 USP17L13C9JLJ4 530 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 USP17L11C9JVI0 530 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 USP17L18D6R9N7 530 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 USP17L22D6RA61 530 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 USP17L17D6RBQ6 530 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 USP17L19D6RCP7 530 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 USP17L20D6RJB6 530 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 TTLL1O95922 423 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 BCRP11274 1271 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 GCLCP48506 637 aaPredicted RBP11.88□□□□□ -0.51
MKS1-208ENST00000579358 IRX3P78415 501 aaPredicted RBP11.88□□□□□ -0.51
MKS1-208ENST00000579358 PTH1RQ03431 593 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 USP17L24Q0WX57 530 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 FAM47AQ5JRC9 791 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 COL13A1Q5TAT6 717 aaPredicted RBP11.88□□□□□ -0.51
MKS1-208ENST00000579358 MFSD6Q6ZSS7 791 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 CEP95Q96GE4 821 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 ASCC2Q9H1I8 757 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms