RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 USP17L18D6R9N7 530 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 USP17L22D6RA61 530 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 USP17L17D6RBQ6 530 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 USP17L19D6RCP7 530 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 USP17L20D6RJB6 530 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 SMARCA5O60264 1052 aaPredicted RBP13.91□□□□□ -0.18
SSH2-208ENST00000579040 HMGCRP04035 888 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 MAPK4P31152 587 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 GUCY1A2P33402 732 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 ERVK-9P63128 1117 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 ERVK-24P63145 666 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 USP17L24Q0WX57 530 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 AMOTL1Q8IY63 956 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 U2AF1L4Q8WU68 220 aaKnown RBP13.91□□□□□ -0.18
SSH2-208ENST00000579040 SOCS4Q8WXH5 440 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 DDRGK1Q96HY6 314 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 TXNRD2Q9NNW7 524 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 RBPJLQ9UBG7 517 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 GJD2Q9UKL4 321 aa13.91□□□□□ -0.18
SSH2-208ENST00000579040 SGPL1O95470 568 aa13.9□□□□□ -0.18
SSH2-208ENST00000579040 VCAM1P19320 739 aa13.9□□□□□ -0.18
SSH2-208ENST00000579040 SEPT2Q15019 361 aa13.9□□□□□ -0.18
SSH2-208ENST00000579040 ZYXQ15942 572 aaKnown RBP13.9□□□□□ -0.18
SSH2-208ENST00000579040 LBX2Q6XYB7 198 aa13.9□□□□□ -0.18
SSH2-208ENST00000579040 TMEM179Q6ZVK1 233 aa13.9□□□□□ -0.18
SSH2-208ENST00000579040 UBE2Q1Q7Z7E8 422 aa13.9□□□□□ -0.18
SSH2-208ENST00000579040 ACER1Q8TDN7 264 aa13.9□□□□□ -0.18
SSH2-208ENST00000579040 PAK6Q9NQU5 681 aaPredicted RBP13.9□□□□□ -0.18
SSH2-208ENST00000579040 RABGAP1Q9Y3P9 1069 aa13.9□□□□□ -0.18
SSH2-208ENST00000579040 RLFQ13129 1914 aa13.9□□□□□ -0.18
SSH2-208ENST00000579040 PARP14Q460N5 1801 aa13.9□□□□□ -0.18
SSH2-208ENST00000579040 MKI67P46013 3256 aaKnown RBP13.89□□□□□ -0.19
SSH2-208ENST00000579040 MPHOSPH10O00566 681 aaKnown RBP13.89□□□□□ -0.19
SSH2-208ENST00000579040 PRKAB2O43741 272 aa13.89□□□□□ -0.19
SSH2-208ENST00000579040 CYP2D6P10635 497 aa13.89□□□□□ -0.19
SSH2-208ENST00000579040 XRCC5P13010 732 aaKnown RBP13.89□□□□□ -0.19
SSH2-208ENST00000579040 CCNA1P78396 465 aa13.89□□□□□ -0.19
SSH2-208ENST00000579040 C12orf60Q5U649 245 aa13.89□□□□□ -0.19
SSH2-208ENST00000579040 CATSPERGQ6ZRH7 1159 aa13.89□□□□□ -0.19
SSH2-208ENST00000579040 CCAR1Q8IX12 1150 aaKnown RBP13.89□□□□□ -0.19
SSH2-208ENST00000579040 TRMT44Q8IYL2 757 aaKnown RBP13.89□□□□□ -0.19
SSH2-208ENST00000579040 KBTBD3Q8NAB2 608 aa13.89□□□□□ -0.19
SSH2-208ENST00000579040 CCDC17Q96LX7 622 aa13.89□□□□□ -0.19
SSH2-208ENST00000579040 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
SSH2-208ENST00000579040 PAGR1Q9BTK6 254 aa13.89□□□□□ -0.19
SSH2-208ENST00000579040 A0A0G2JMZ2 1700 aa13.89□□□□□ -0.19
SSH2-208ENST00000579040 GREB1LQ9C091 1923 aaPredicted RBP13.88□□□□□ -0.19
SSH2-208ENST00000579040 FARP2O94887 1054 aaPredicted RBP13.88□□□□□ -0.19
SSH2-208ENST00000579040 EVX2Q03828 476 aa13.88□□□□□ -0.19
SSH2-208ENST00000579040 SLFNL1Q499Z3 407 aa13.88□□□□□ -0.19
SSH2-208ENST00000579040 SLC44A5Q8NCS7 719 aa13.88□□□□□ -0.19
SSH2-208ENST00000579040 HTATIP2Q9BUP3 242 aa13.88□□□□□ -0.19
SSH2-208ENST00000579040 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.88□□□□□ -0.19
SSH2-208ENST00000579040 SLC4A4Q9Y6R1 1079 aa13.88□□□□□ -0.19
SSH2-208ENST00000579040 BRCA2P51587 3418 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 USP17L12C9JPN9 530 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 USP17L21D6R901 530 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 GLRX3O76003 335 aaKnown RBP13.87□□□□□ -0.19
SSH2-208ENST00000579040 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
SSH2-208ENST00000579040 RRP1P56182 461 aaKnown RBP13.87□□□□□ -0.19
SSH2-208ENST00000579040 Q3C1V9 767 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 POTEEQ6S8J3 1075 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 C16orf86Q6ZW13 317 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 GPR142Q7Z601 462 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 PLEKHH3Q7Z736 793 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 USP6NLQ92738 828 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 DYNLL2Q96FJ2 89 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 DEFB118Q96PH6 123 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 CRISPLD2Q9H0B8 497 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 PUS7LQ9H0K6 701 aaKnown RBP13.87□□□□□ -0.19
SSH2-208ENST00000579040 PORCNQ9H237 461 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 RPAP3Q9H6T3 665 aaPredicted RBP13.87□□□□□ -0.19
SSH2-208ENST00000579040 SH2D4AQ9H788 454 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 ARHGEF10LQ9HCE6 1279 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 ZNF236Q9UL36 1845 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 TTC41PQ6P2S7 1318 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 RPTORQ8N122 1335 aa13.87□□□□□ -0.19
SSH2-208ENST00000579040 A0A1W2PRG0 241 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 SPDYE16A6NNV3 312 aaPredicted RBP13.86□□□□□ -0.19
SSH2-208ENST00000579040 PEX10O60683 326 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 CNMDO75829 334 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 TFRCP02786 760 aaKnown RBP13.86□□□□□ -0.19
SSH2-208ENST00000579040 CHGBP05060 677 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 RGS2P41220 211 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 CDK8P49336 464 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 LRRFIP1Q32MZ4 808 aaKnown RBP13.86□□□□□ -0.19
SSH2-208ENST00000579040 MORN1Q5T089 497 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 GIMAP6Q6P9H5 292 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 TRIB2Q92519 343 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 APPBP2Q92624 585 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 LPAR1Q92633 364 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 STRBPQ96SI9 672 aaKnown RBP13.86□□□□□ -0.19
SSH2-208ENST00000579040 APBA2Q99767 749 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 CWC22Q9HCG8 908 aaKnown RBP13.86□□□□□ -0.19
SSH2-208ENST00000579040 HMX1Q9NP08 348 aaPredicted RBP13.86□□□□□ -0.19
SSH2-208ENST00000579040 ARPP21Q9UBL0 812 aaPredicted RBP13.86□□□□□ -0.19
SSH2-208ENST00000579040 PCDHB15Q9Y5E8 787 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 ALPK3Q96L96 1907 aa13.86□□□□□ -0.19
SSH2-208ENST00000579040 FRMPD3Q5JV73 1810 aa13.85□□□□□ -0.19
SSH2-208ENST00000579040 CYP2D7A0A087X1C5 515 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms