RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 KIAA1683Q9H0B3 1180 aa17.53■□□□□ 0.4
CCDC57-212ENST00000578910 GJD2Q9UKL4 321 aa17.53■□□□□ 0.4
CCDC57-212ENST00000578910 A0A1W2PRG0 241 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L15C9J2P7 530 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L11C9JVI0 530 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L18D6R9N7 530 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L22D6RA61 530 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L19D6RCP7 530 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L20D6RJB6 530 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 RNF113AO15541 343 aaKnown RBP17.52■□□□□ 0.4
CCDC57-212ENST00000578910 CCL5P13501 91 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 CDK8P49336 464 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 UBXN2AP68543 259 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 USP17L24Q0WX57 530 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 CTR9Q6PD62 1173 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 CATSPERGQ6ZRH7 1159 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 SLAIN1Q8ND83 568 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 GPRC5AQ8NFJ5 357 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 PXYLP1Q8TE99 480 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 OSBP2Q969R2 916 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 RNF208Q9H0X6 261 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 SWAP70Q9UH65 585 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 TAOK2Q9UL54 1235 aa17.52■□□□□ 0.4
CCDC57-212ENST00000578910 ANKRD45Q5TZF3 282 aa17.51■□□□□ 0.39
CCDC57-212ENST00000578910 SIAH1Q8IUQ4 282 aa17.51■□□□□ 0.39
CCDC57-212ENST00000578910 PI4K2BQ8TCG2 481 aa17.51■□□□□ 0.39
CCDC57-212ENST00000578910 TTC41PQ6P2S7 1318 aa17.5■□□□□ 0.39
CCDC57-212ENST00000578910 GSG1L2A8MUP6 293 aa17.5■□□□□ 0.39
CCDC57-212ENST00000578910 GJB1P08034 283 aa17.5■□□□□ 0.39
CCDC57-212ENST00000578910 AKR1B1P15121 316 aa17.5■□□□□ 0.39
CCDC57-212ENST00000578910 DDRGK1Q96HY6 314 aa17.5■□□□□ 0.39
CCDC57-212ENST00000578910 PAGR1Q9BTK6 254 aa17.5■□□□□ 0.39
CCDC57-212ENST00000578910 UNC93B1Q9H1C4 597 aa17.5■□□□□ 0.39
CCDC57-212ENST00000578910 PDE4DIPQ5VU43 2346 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 RBBP6Q7Z6E9 1792 aaKnown RBP17.49■□□□□ 0.39
CCDC57-212ENST00000578910 ERC2O15083 957 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 VCAM1P19320 739 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 ERVK-9P63128 1117 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 ERVK-24P63145 666 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 TMEM179Q6ZVK1 233 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 C16orf86Q6ZW13 317 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 AMOTL1Q8IY63 956 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 APPBP2Q92624 585 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 CCDC17Q96LX7 622 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 NAV1Q8NEY1 1877 aa17.49■□□□□ 0.39
CCDC57-212ENST00000578910 DDX60LQ5H9U9 1706 aaKnown RBP17.49■□□□□ 0.39
CCDC57-212ENST00000578910 BAZ2AQ9UIF9 1905 aaKnown RBP17.49■□□□□ 0.39
CCDC57-212ENST00000578910 CNMDO75829 334 aa17.48■□□□□ 0.39
CCDC57-212ENST00000578910 GLRX3O76003 335 aaKnown RBP17.48■□□□□ 0.39
CCDC57-212ENST00000578910 INHAP05111 366 aa17.48■□□□□ 0.39
CCDC57-212ENST00000578910 ZFYP08048 801 aaPredicted RBP17.48■□□□□ 0.39
CCDC57-212ENST00000578910 GJA8P48165 433 aa17.48■□□□□ 0.39
CCDC57-212ENST00000578910 KIAA1755Q5JYT7 1200 aa17.48■□□□□ 0.39
CCDC57-212ENST00000578910 PRPF38BQ5VTL8 546 aaKnown RBP17.48■□□□□ 0.39
CCDC57-212ENST00000578910 SHISA4Q96DD7 197 aa17.48■□□□□ 0.39
CCDC57-212ENST00000578910 PORCNQ9H237 461 aa17.48■□□□□ 0.39
CCDC57-212ENST00000578910 RPAP3Q9H6T3 665 aaPredicted RBP17.48■□□□□ 0.39
CCDC57-212ENST00000578910 RABGAP1Q9Y3P9 1069 aa17.48■□□□□ 0.39
CCDC57-212ENST00000578910 BRCA2P51587 3418 aa17.48■□□□□ 0.39
CCDC57-212ENST00000578910 MYH7P12883 1935 aa17.47■□□□□ 0.39
CCDC57-212ENST00000578910 M0R2C6 588 aa17.47■□□□□ 0.39
CCDC57-212ENST00000578910 HDAC1Q13547 482 aaPredicted RBP17.47■□□□□ 0.39
CCDC57-212ENST00000578910 SBK1Q52WX2 424 aa17.47■□□□□ 0.39
CCDC57-212ENST00000578910 CLEC10AQ8IUN9 316 aa17.47■□□□□ 0.39
CCDC57-212ENST00000578910 STK11IPQ8N1F8 1099 aa17.47■□□□□ 0.39
CCDC57-212ENST00000578910 NKX2-3Q8TAU0 364 aa17.47■□□□□ 0.39
CCDC57-212ENST00000578910 GTF3C2Q8WUA4 911 aaPredicted RBP17.47■□□□□ 0.39
CCDC57-212ENST00000578910 SEC62Q99442 399 aaKnown RBP17.47■□□□□ 0.39
CCDC57-212ENST00000578910 MKI67P46013 3256 aaKnown RBP17.47■□□□□ 0.39
CCDC57-212ENST00000578910 MINDY4BA8MYZ0 360 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 GPAA1O43292 621 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 SGPL1O95470 568 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 MX1P20591 662 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 CYP2B6P20813 491 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 MAPK4P31152 587 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 GIMAP6Q6P9H5 292 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 CCAR1Q8IX12 1150 aaKnown RBP17.46■□□□□ 0.39
CCDC57-212ENST00000578910 U2AF1L4Q8WU68 220 aaKnown RBP17.46■□□□□ 0.39
CCDC57-212ENST00000578910 GCC1Q96CN9 775 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 NUDT12Q9BQG2 462 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 BTBD7Q9P203 1132 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
CCDC57-212ENST00000578910 TMX2Q9Y320 296 aa17.46■□□□□ 0.39
CCDC57-212ENST00000578910 SALL3Q9BXA9 1300 aa17.46■□□□□ 0.38
CCDC57-212ENST00000578910 PATL2C9JE40 543 aaKnown RBP17.45■□□□□ 0.38
CCDC57-212ENST00000578910 TRIM32Q13049 653 aa17.45■□□□□ 0.38
CCDC57-212ENST00000578910 COG2Q14746 738 aa17.45■□□□□ 0.38
CCDC57-212ENST00000578910 LRRFIP1Q32MZ4 808 aaKnown RBP17.45■□□□□ 0.38
CCDC57-212ENST00000578910 LBX2Q6XYB7 198 aa17.45■□□□□ 0.38
CCDC57-212ENST00000578910 GPR142Q7Z601 462 aa17.45■□□□□ 0.38
CCDC57-212ENST00000578910 PLEKHH3Q7Z736 793 aa17.45■□□□□ 0.38
CCDC57-212ENST00000578910 HOXC10Q9NYD6 342 aa17.45■□□□□ 0.38
CCDC57-212ENST00000578910 ARPP21Q9UBL0 812 aaPredicted RBP17.45■□□□□ 0.38
CCDC57-212ENST00000578910 SPDYE16A6NNV3 312 aaPredicted RBP17.44■□□□□ 0.38
CCDC57-212ENST00000578910 APPP05067 770 aa17.44■□□□□ 0.38
CCDC57-212ENST00000578910 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
CCDC57-212ENST00000578910 ICA1Q05084 483 aa17.44■□□□□ 0.38
CCDC57-212ENST00000578910 USP6NLQ92738 828 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms