RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 TMOD4Q9NZQ9 345 aa17.27■□□□□ 0.36
MKS1-207ENST00000578789 PNMA3Q9UL41 463 aa17.27■□□□□ 0.36
MKS1-207ENST00000578789 CCDC171Q6TFL3 1326 aa17.26■□□□□ 0.35
MKS1-207ENST00000578789 MINDY4BA8MYZ0 360 aa17.26■□□□□ 0.35
MKS1-207ENST00000578789 HIP1O00291 1037 aa17.26■□□□□ 0.35
MKS1-207ENST00000578789 MPHOSPH10O00566 681 aaKnown RBP17.26■□□□□ 0.35
MKS1-207ENST00000578789 BCRP11274 1271 aa17.26■□□□□ 0.35
MKS1-207ENST00000578789 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.35
MKS1-207ENST00000578789 ALX1Q15699 326 aa17.26■□□□□ 0.35
MKS1-207ENST00000578789 PKN2Q16513 984 aaKnown RBP17.26■□□□□ 0.35
MKS1-207ENST00000578789 USP17L2Q6R6M4 530 aa17.26■□□□□ 0.35
MKS1-207ENST00000578789 ZNF589Q86UQ0 364 aaPredicted RBP17.26■□□□□ 0.35
MKS1-207ENST00000578789 CD99L2Q8TCZ2 262 aa17.26■□□□□ 0.35
MKS1-207ENST00000578789 FEZ1Q99689 392 aa17.26■□□□□ 0.35
MKS1-207ENST00000578789 EMILIN3Q9NT22 766 aa17.26■□□□□ 0.35
MKS1-207ENST00000578789 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
MKS1-207ENST00000578789 MGAMO43451 1857 aa17.25■□□□□ 0.35
MKS1-207ENST00000578789 RASA1P20936 1047 aa17.25■□□□□ 0.35
MKS1-207ENST00000578789 HOXA7P31268 230 aaPredicted RBP17.25■□□□□ 0.35
MKS1-207ENST00000578789 USP14P54578 494 aa17.25■□□□□ 0.35
MKS1-207ENST00000578789 CAP1Q01518 475 aa17.25■□□□□ 0.35
MKS1-207ENST00000578789 VPS53Q5VIR6 699 aa17.25■□□□□ 0.35
MKS1-207ENST00000578789 ACER1Q8TDN7 264 aa17.25■□□□□ 0.35
MKS1-207ENST00000578789 ABHD8Q96I13 439 aa17.25■□□□□ 0.35
MKS1-207ENST00000578789 CPA4Q9UI42 421 aa17.25■□□□□ 0.35
MKS1-207ENST00000578789 LAMA4Q16363 1823 aa17.25■□□□□ 0.35
MKS1-207ENST00000578789 LACTBP83111 547 aaPredicted RBP17.24■□□□□ 0.35
MKS1-207ENST00000578789 PPARAQ07869 468 aa17.24■□□□□ 0.35
MKS1-207ENST00000578789 OTOP1Q7RTM1 612 aa17.24■□□□□ 0.35
MKS1-207ENST00000578789 DIAPH3Q9NSV4 1193 aa17.24■□□□□ 0.35
MKS1-207ENST00000578789 PLIN4Q96Q06 1357 aa17.24■□□□□ 0.35
MKS1-207ENST00000578789 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
MKS1-207ENST00000578789 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
MKS1-207ENST00000578789 OSBPP22059 807 aa17.23■□□□□ 0.35
MKS1-207ENST00000578789 MFAP1P55081 439 aaKnown RBP17.23■□□□□ 0.35
MKS1-207ENST00000578789 ICA1Q05084 483 aa17.23■□□□□ 0.35
MKS1-207ENST00000578789 SMCR8Q8TEV9 937 aaPredicted RBP17.23■□□□□ 0.35
MKS1-207ENST00000578789 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.23■□□□□ 0.35
MKS1-207ENST00000578789 ASCC2Q9H1I8 757 aaPredicted RBP17.23■□□□□ 0.35
MKS1-207ENST00000578789 ZNF287Q9HBT7 754 aa17.23■□□□□ 0.35
MKS1-207ENST00000578789 ANAPC4Q9UJX5 808 aa17.23■□□□□ 0.35
MKS1-207ENST00000578789 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
MKS1-207ENST00000578789 SLC3A2P08195 630 aaKnown RBP17.22■□□□□ 0.35
MKS1-207ENST00000578789 ARHGEF6Q15052 776 aa17.22■□□□□ 0.35
MKS1-207ENST00000578789 ZYXQ15942 572 aaKnown RBP17.22■□□□□ 0.35
MKS1-207ENST00000578789 FBXO46Q6PJ61 603 aaPredicted RBP17.22■□□□□ 0.35
MKS1-207ENST00000578789 CWC27Q6UX04 472 aaKnown RBP17.22■□□□□ 0.35
MKS1-207ENST00000578789 CLEC10AQ8IUN9 316 aa17.22■□□□□ 0.35
MKS1-207ENST00000578789 SIAH1Q8IUQ4 282 aa17.22■□□□□ 0.35
MKS1-207ENST00000578789 KANSL2Q9H9L4 492 aa17.22■□□□□ 0.35
MKS1-207ENST00000578789 EFCC1Q9HA90 598 aa17.22■□□□□ 0.35
MKS1-207ENST00000578789 MKNK2Q9HBH9 465 aa17.22■□□□□ 0.35
MKS1-207ENST00000578789 ARHGEF10LQ9HCE6 1279 aa17.22■□□□□ 0.35
MKS1-207ENST00000578789 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
MKS1-207ENST00000578789 IGKV6D-41A0A0C4DH26 115 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 NEFLP07196 543 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
MKS1-207ENST00000578789 VCAM1P19320 739 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 GCLCP48506 637 aaPredicted RBP17.21■□□□□ 0.35
MKS1-207ENST00000578789 IRX3P78415 501 aaPredicted RBP17.21■□□□□ 0.35
MKS1-207ENST00000578789 PDE4BQ07343 736 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 KIF22Q14807 665 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 FAM110CQ1W6H9 321 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 STK11IPQ8N1F8 1099 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 ARHGAP39Q9C0H5 1083 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 SH2D4AQ9H788 454 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 TMX2Q9Y320 296 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 MYH4Q9Y623 1939 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 PARP14Q460N5 1801 aa17.21■□□□□ 0.35
MKS1-207ENST00000578789 RAD50Q92878 1312 aa17.21■□□□□ 0.34
MKS1-207ENST00000578789 RLFQ13129 1914 aa17.2■□□□□ 0.34
MKS1-207ENST00000578789 GNRH1P01148 92 aa17.2■□□□□ 0.34
MKS1-207ENST00000578789 FGAP02671 866 aa17.2■□□□□ 0.34
MKS1-207ENST00000578789 CTGFP29279 349 aa17.2■□□□□ 0.34
MKS1-207ENST00000578789 A0A0G2JMZ2 1700 aa17.2■□□□□ 0.34
MKS1-207ENST00000578789 USP17L15C9J2P7 530 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 USP17L13C9JLJ4 530 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 USP17L11C9JVI0 530 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 USP17L18D6R9N7 530 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 USP17L22D6RA61 530 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 USP17L17D6RBQ6 530 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 USP17L19D6RCP7 530 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 USP17L20D6RJB6 530 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 PRDM1O75626 825 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 EEF2P13639 858 aaKnown RBP17.19■□□□□ 0.34
MKS1-207ENST00000578789 USP17L24Q0WX57 530 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 CATSPERGQ6ZRH7 1159 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 ZNF444Q8N0Y2 327 aaPredicted RBP17.19■□□□□ 0.34
MKS1-207ENST00000578789 ANKRD13CQ8N6S4 541 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 GTF3C2Q8WUA4 911 aaPredicted RBP17.19■□□□□ 0.34
MKS1-207ENST00000578789 LPAR1Q92633 364 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 VCPKMTQ9H867 229 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 MORF4L1Q9UBU8 362 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 HPS5Q9UPZ3 1129 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 PTPN22Q9Y2R2 807 aa17.19■□□□□ 0.34
MKS1-207ENST00000578789 FGRP09769 529 aa17.18■□□□□ 0.34
MKS1-207ENST00000578789 PSMC4P43686 418 aa17.18■□□□□ 0.34
MKS1-207ENST00000578789 HERVK_113P62684 666 aa17.18■□□□□ 0.34
MKS1-207ENST00000578789 CTDSPL2Q05D32 466 aa17.18■□□□□ 0.34
MKS1-207ENST00000578789 KIAA1755Q5JYT7 1200 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms