RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 ALX1Q15699 326 aa27.56■■■□□ 2
LIMD2-204ENST00000578297 USP17L2Q6R6M4 530 aa27.56■■■□□ 2
LIMD2-204ENST00000578297 KIAA1683Q9H0B3 1180 aa27.56■■■□□ 2
LIMD2-204ENST00000578297 MKNK2Q9HBH9 465 aa27.56■■■□□ 2
LIMD2-204ENST00000578297 ZNF287Q9HBT7 754 aa27.56■■■□□ 2
LIMD2-204ENST00000578297 EMILIN3Q9NT22 766 aa27.56■■■□□ 2
LIMD2-204ENST00000578297 PNMA3Q9UL41 463 aa27.56■■■□□ 2
LIMD2-204ENST00000578297 CCDC171Q6TFL3 1326 aa27.56■■■□□ 2
LIMD2-204ENST00000578297 HSPD1P10809 573 aaKnown RBP27.55■■■□□ 2
LIMD2-204ENST00000578297 USP14P54578 494 aa27.55■■■□□ 2
LIMD2-204ENST00000578297 CWC27Q6UX04 472 aaKnown RBP27.55■■■□□ 2
LIMD2-204ENST00000578297 ACER1Q8TDN7 264 aa27.55■■■□□ 2
LIMD2-204ENST00000578297 FEZ1Q99689 392 aa27.55■■■□□ 2
LIMD2-204ENST00000578297 MCOLN1Q9GZU1 580 aa27.55■■■□□ 2
LIMD2-204ENST00000578297 RASA1P20936 1047 aa27.54■■■□□ 2
LIMD2-204ENST00000578297 PPARAQ07869 468 aa27.54■■■□□ 2
LIMD2-204ENST00000578297 STK11IPQ8N1F8 1099 aa27.54■■■□□ 2
LIMD2-204ENST00000578297 CD99L2Q8TCZ2 262 aa27.54■■■□□ 2
LIMD2-204ENST00000578297 CCDC136Q96JN2 1154 aa27.54■■■□□ 2
LIMD2-204ENST00000578297 C12orf42Q96LP6 360 aa27.54■■■□□ 2
LIMD2-204ENST00000578297 CPA4Q9UI42 421 aa27.54■■■□□ 2
LIMD2-204ENST00000578297 SLC3A2P08195 630 aaKnown RBP27.53■■■□□ 2
LIMD2-204ENST00000578297 HOXA7P31268 230 aaPredicted RBP27.53■■■□□ 2
LIMD2-204ENST00000578297 PKN2Q16513 984 aaKnown RBP27.53■■■□□ 2
LIMD2-204ENST00000578297 OSBPP22059 807 aa27.52■■■□□ 2
LIMD2-204ENST00000578297 ZMYM6O95789 1325 aa27.51■■□□□ 1.99
LIMD2-204ENST00000578297 A0A1W2PRG0 241 aa27.51■■□□□ 1.99
LIMD2-204ENST00000578297 FGAP02671 866 aa27.51■■□□□ 1.99
LIMD2-204ENST00000578297 BCRP11274 1271 aa27.51■■□□□ 1.99
LIMD2-204ENST00000578297 ICA1Q05084 483 aa27.51■■□□□ 1.99
LIMD2-204ENST00000578297 PDE4BQ07343 736 aa27.51■■□□□ 1.99
LIMD2-204ENST00000578297 ZYXQ15942 572 aaKnown RBP27.51■■□□□ 1.99
LIMD2-204ENST00000578297 SIAH1Q8IUQ4 282 aa27.51■■□□□ 1.99
LIMD2-204ENST00000578297 SMCR8Q8TEV9 937 aaPredicted RBP27.51■■□□□ 1.99
LIMD2-204ENST00000578297 ASCC2Q9H1I8 757 aaPredicted RBP27.51■■□□□ 1.99
LIMD2-204ENST00000578297 KANSL2Q9H9L4 492 aa27.51■■□□□ 1.99
LIMD2-204ENST00000578297 ANAPC4Q9UJX5 808 aa27.51■■□□□ 1.99
LIMD2-204ENST00000578297 LACTBP83111 547 aaPredicted RBP27.5■■□□□ 1.99
LIMD2-204ENST00000578297 OTOP1Q7RTM1 612 aa27.5■■□□□ 1.99
LIMD2-204ENST00000578297 ZNF444Q8N0Y2 327 aaPredicted RBP27.5■■□□□ 1.99
LIMD2-204ENST00000578297 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.5■■□□□ 1.99
LIMD2-204ENST00000578297 ARHGEF10LQ9HCE6 1279 aa27.5■■□□□ 1.99
LIMD2-204ENST00000578297 PRDM1O75626 825 aa27.49■■□□□ 1.99
LIMD2-204ENST00000578297 CAP1Q01518 475 aa27.49■■□□□ 1.99
LIMD2-204ENST00000578297 ARHGEF6Q15052 776 aa27.49■■□□□ 1.99
LIMD2-204ENST00000578297 TRIM17Q9Y577 477 aa27.49■■□□□ 1.99
LIMD2-204ENST00000578297 GREB1LQ9C091 1923 aaPredicted RBP27.49■■□□□ 1.99
LIMD2-204ENST00000578297 IRX3P78415 501 aaPredicted RBP27.48■■□□□ 1.99
LIMD2-204ENST00000578297 KIF22Q14807 665 aa27.48■■□□□ 1.99
LIMD2-204ENST00000578297 CLEC10AQ8IUN9 316 aa27.48■■□□□ 1.99
LIMD2-204ENST00000578297 ABHD8Q96I13 439 aa27.48■■□□□ 1.99
LIMD2-204ENST00000578297 SH2D4AQ9H788 454 aa27.48■■□□□ 1.99
LIMD2-204ENST00000578297 EFCC1Q9HA90 598 aa27.48■■□□□ 1.99
LIMD2-204ENST00000578297 TMX2Q9Y320 296 aa27.48■■□□□ 1.99
LIMD2-204ENST00000578297 GCLCP48506 637 aaPredicted RBP27.47■■□□□ 1.99
LIMD2-204ENST00000578297 CTDSPL2Q05D32 466 aa27.47■■□□□ 1.99
LIMD2-204ENST00000578297 USP17L15C9J2P7 530 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 USP17L13C9JLJ4 530 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 USP17L11C9JVI0 530 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 USP17L18D6R9N7 530 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 USP17L22D6RA61 530 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 USP17L17D6RBQ6 530 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 USP17L19D6RCP7 530 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 USP17L20D6RJB6 530 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 EEF2P13639 858 aaKnown RBP27.46■■□□□ 1.99
LIMD2-204ENST00000578297 VCAM1P19320 739 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 CHMLP26374 656 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 USP17L24Q0WX57 530 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 ERICH6BQ5W0A0 696 aa27.46■■□□□ 1.99
LIMD2-204ENST00000578297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.46■■□□□ 1.99
LIMD2-204ENST00000578297 IGKV6D-41A0A0C4DH26 115 aa27.45■■□□□ 1.98
LIMD2-204ENST00000578297 FBXO46Q6PJ61 603 aaPredicted RBP27.45■■□□□ 1.98
LIMD2-204ENST00000578297 CATSPERGQ6ZRH7 1159 aa27.45■■□□□ 1.98
LIMD2-204ENST00000578297 ANKRD13CQ8N6S4 541 aa27.45■■□□□ 1.98
LIMD2-204ENST00000578297 P2RX7Q99572 595 aaKnown RBP27.45■■□□□ 1.98
LIMD2-204ENST00000578297 DSCC1Q9BVC3 393 aa27.45■■□□□ 1.98
LIMD2-204ENST00000578297 ARHGAP39Q9C0H5 1083 aa27.45■■□□□ 1.98
LIMD2-204ENST00000578297 RAD50Q92878 1312 aa27.44■■□□□ 1.98
LIMD2-204ENST00000578297 GNRH1P01148 92 aa27.44■■□□□ 1.98
LIMD2-204ENST00000578297 FGRP09769 529 aa27.44■■□□□ 1.98
LIMD2-204ENST00000578297 FAM110CQ1W6H9 321 aa27.44■■□□□ 1.98
LIMD2-204ENST00000578297 RUFY2Q8WXA3 655 aa27.44■■□□□ 1.98
LIMD2-204ENST00000578297 LPAR1Q92633 364 aa27.44■■□□□ 1.98
LIMD2-204ENST00000578297 VCPKMTQ9H867 229 aa27.44■■□□□ 1.98
LIMD2-204ENST00000578297 NYAP2Q9P242 653 aa27.44■■□□□ 1.98
LIMD2-204ENST00000578297 PLIN4Q96Q06 1357 aa27.44■■□□□ 1.98
LIMD2-204ENST00000578297 TSPY3P0CV98 308 aa27.43■■□□□ 1.98
LIMD2-204ENST00000578297 TSPY8P0CW00 308 aa27.43■■□□□ 1.98
LIMD2-204ENST00000578297 HERVK_113P62684 666 aa27.43■■□□□ 1.98
LIMD2-204ENST00000578297 ATP2B2Q01814 1243 aa27.43■■□□□ 1.98
LIMD2-204ENST00000578297 IFFO2Q5TF58 517 aa27.43■■□□□ 1.98
LIMD2-204ENST00000578297 SKAP1Q86WV1 359 aa27.43■■□□□ 1.98
LIMD2-204ENST00000578297 NEDD1Q8NHV4 660 aa27.43■■□□□ 1.98
LIMD2-204ENST00000578297 IL25Q9H293 177 aa27.43■■□□□ 1.98
LIMD2-204ENST00000578297 RPAP3Q9H6T3 665 aaPredicted RBP27.43■■□□□ 1.98
LIMD2-204ENST00000578297 TACC3Q9Y6A5 838 aa27.43■■□□□ 1.98
LIMD2-204ENST00000578297 ORC4O43929 436 aa27.42■■□□□ 1.98
LIMD2-204ENST00000578297 CTGFP29279 349 aa27.42■■□□□ 1.98
LIMD2-204ENST00000578297 PSMC4P43686 418 aa27.42■■□□□ 1.98
LIMD2-204ENST00000578297 TFAP4Q01664 338 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms