RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 MKNK2Q9HBH9 465 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 SNX14Q9Y5W7 946 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 TRPM7Q96QT4 1865 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 PPP1R12BO60237 982 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 CDK8P49336 464 aa13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 TBC1D10CQ8IV04 446 aa13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 ZNF784Q8NCA9 323 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 SMC1BQ8NDV3 1235 aa13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 NCOA7Q8NI08 942 aa13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 RBM46Q8TBY0 533 aaKnown RBP13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 ESR2Q92731 530 aa13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 CCDC17Q96LX7 622 aa13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 ZNF341Q9BYN7 854 aa13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 TM6SF1Q9BZW5 370 aa13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 NBPF3Q9H094 633 aa13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 SCAF8Q9UPN6 1271 aaKnown RBP13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 SSC5DA1L4H1 1573 aa13.23□□□□□ -0.29
TRAPPC8-204ENST00000578252 PAPPA2Q9BXP8 1791 aa13.22□□□□□ -0.29
TRAPPC8-204ENST00000578252 TOMM70O94826 608 aa13.22□□□□□ -0.29
TRAPPC8-204ENST00000578252 TATDN1Q6P1N9 297 aa13.22□□□□□ -0.29
TRAPPC8-204ENST00000578252 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC8-204ENST00000578252 DYNLL2Q96FJ2 89 aa13.22□□□□□ -0.29
TRAPPC8-204ENST00000578252 TOMM22Q9NS69 142 aa13.22□□□□□ -0.29
TRAPPC8-204ENST00000578252 GINM1Q9NU53 330 aa13.22□□□□□ -0.29
TRAPPC8-204ENST00000578252 ATAD5Q96QE3 1844 aa13.22□□□□□ -0.29
TRAPPC8-204ENST00000578252 DOCK1Q14185 1865 aa13.21□□□□□ -0.29
TRAPPC8-204ENST00000578252 SHMT1P34896 483 aa13.21□□□□□ -0.29
TRAPPC8-204ENST00000578252 FKBP1BP68106 108 aa13.21□□□□□ -0.29
TRAPPC8-204ENST00000578252 CERKLQ49MI3 558 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC8-204ENST00000578252 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
TRAPPC8-204ENST00000578252 NEK1Q96PY6 1258 aa13.21□□□□□ -0.29
TRAPPC8-204ENST00000578252 DNAJC18Q9H819 358 aa13.21□□□□□ -0.29
TRAPPC8-204ENST00000578252 GREB1LQ9C091 1923 aaPredicted RBP13.21□□□□□ -0.3
TRAPPC8-204ENST00000578252 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 NEDD4P46934 1319 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 WDR19Q8NEZ3 1342 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 UNCXA6NJT0 531 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 ITGBL1O95965 494 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 RASA1P20936 1047 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 IREB2P48200 963 aaKnown RBP13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 FSTL1Q12841 308 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 RRP12Q5JTH9 1297 aaKnown RBP13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 PRAMEF18Q5VWM3 479 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 BLOC1S2Q6QNY1 142 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 STOX1Q6ZVD7 989 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 STK11IPQ8N1F8 1099 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 SLC44A5Q8NCS7 719 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 JAKMIP1Q96N16 626 aaKnown RBP13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 MTA3Q9BTC8 594 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 TAF6LQ9Y6J9 622 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
TRAPPC8-204ENST00000578252 FAM196BA6NMK8 535 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 SMIM22K7EJ46 135 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 TRAF5O00463 557 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 RANBP6O60518 1105 aaKnown RBP13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 CTNND1O60716 968 aaKnown RBP13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 KDM4AO75164 1064 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 PRDM1O75626 825 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 MCM5P33992 734 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 SART3Q15020 963 aaKnown RBP13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 MAP3K11Q16584 847 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 MIGA2Q7L4E1 593 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 ARMC9Q7Z3E5 817 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 IQCA1Q86XH1 822 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 MB21D2Q8IYB1 491 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
TRAPPC8-204ENST00000578252 PHF20L1A8MW92 1017 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 B4E1Z4 1266 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 ASNSP08243 561 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 CAP2P40123 477 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 TFAP4Q01664 338 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 RABEP1Q15276 862 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 ADCK5Q3MIX3 580 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 NOL9Q5SY16 702 aaKnown RBP13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 TMEM179Q6ZVK1 233 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 DHX32Q7L7V1 743 aaKnown RBP13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 C2orf69Q8N8R5 385 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 NEDD1Q8NHV4 660 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 KLRG1Q96E93 195 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 WRNIP1Q96S55 665 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 TCP11L1Q9NUJ3 509 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 TACC3Q9Y6A5 838 aa13.18□□□□□ -0.3
TRAPPC8-204ENST00000578252 ERICH2A1L162 156 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 USP2O75604 605 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 RPS6KB1P23443 525 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 PBX2P40425 430 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 RUFY3Q7L099 469 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms