RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PXYLP1Q8TE99 480 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 APPBP2Q92624 585 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 PUS7LQ9H0K6 701 aaKnown RBP15.36■□□□□ 0.05
CCDC57-211ENST00000578187 ARMT1Q9H993 441 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 GABRQQ9UN88 632 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 MKI67P46013 3256 aaKnown RBP15.35■□□□□ 0.05
CCDC57-211ENST00000578187 USP17L10C9JJH3 530 aa15.35■□□□□ 0.05
CCDC57-211ENST00000578187 GJB1P08034 283 aa15.35■□□□□ 0.05
CCDC57-211ENST00000578187 GJA8P48165 433 aa15.35■□□□□ 0.05
CCDC57-211ENST00000578187 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
CCDC57-211ENST00000578187 TTC6Q86TZ1 520 aa15.35■□□□□ 0.05
CCDC57-211ENST00000578187 SDR42E1Q8WUS8 393 aa15.35■□□□□ 0.05
CCDC57-211ENST00000578187 EVI5LQ96CN4 794 aa15.35■□□□□ 0.05
CCDC57-211ENST00000578187 FSD1Q9BTV5 496 aa15.35■□□□□ 0.05
CCDC57-211ENST00000578187 ASCC2Q9H1I8 757 aaPredicted RBP15.35■□□□□ 0.05
CCDC57-211ENST00000578187 DNAJC18Q9H819 358 aa15.35■□□□□ 0.05
CCDC57-211ENST00000578187 GDF11O95390 407 aa15.34■□□□□ 0.05
CCDC57-211ENST00000578187 CCAR1Q8IX12 1150 aaKnown RBP15.34■□□□□ 0.05
CCDC57-211ENST00000578187 GTF3C2Q8WUA4 911 aaPredicted RBP15.34■□□□□ 0.05
CCDC57-211ENST00000578187 OSBP2Q969R2 916 aa15.34■□□□□ 0.05
CCDC57-211ENST00000578187 HTATIP2Q9BUP3 242 aa15.34■□□□□ 0.05
CCDC57-211ENST00000578187 EHD4Q9H223 541 aa15.34■□□□□ 0.05
CCDC57-211ENST00000578187 DCP1AQ9NPI6 582 aaPredicted RBP15.34■□□□□ 0.05
CCDC57-211ENST00000578187 SERPINB13Q9UIV8 391 aa15.34■□□□□ 0.05
CCDC57-211ENST00000578187 ZBTB21Q9ULJ3 1066 aa15.34■□□□□ 0.05
CCDC57-211ENST00000578187 INHAP05111 366 aa15.33■□□□□ 0.04
CCDC57-211ENST00000578187 PDE4AP27815 886 aa15.33■□□□□ 0.04
CCDC57-211ENST00000578187 RRP1BQ14684 758 aaKnown RBP15.33■□□□□ 0.04
CCDC57-211ENST00000578187 TICAM2Q86XR7 235 aa15.33■□□□□ 0.04
CCDC57-211ENST00000578187 FEZ1Q99689 392 aa15.33■□□□□ 0.04
CCDC57-211ENST00000578187 ATP8A2Q9NTI2 1148 aa15.33■□□□□ 0.04
CCDC57-211ENST00000578187 M0R2C6 588 aa15.32■□□□□ 0.04
CCDC57-211ENST00000578187 PRKAB2O43741 272 aa15.32■□□□□ 0.04
CCDC57-211ENST00000578187 POLR3DP05423 398 aaPredicted RBP15.32■□□□□ 0.04
CCDC57-211ENST00000578187 CENPBP07199 599 aaPredicted RBP15.32■□□□□ 0.04
CCDC57-211ENST00000578187 ELNP15502 786 aa15.32■□□□□ 0.04
CCDC57-211ENST00000578187 HOXA7P31268 230 aaPredicted RBP15.32■□□□□ 0.04
CCDC57-211ENST00000578187 ZMYM1Q5SVZ6 1142 aa15.32■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L2Q6R6M4 530 aa15.32■□□□□ 0.04
CCDC57-211ENST00000578187 U2AF1L4Q8WU68 220 aaKnown RBP15.32■□□□□ 0.04
CCDC57-211ENST00000578187 DPF3Q92784 378 aa15.32■□□□□ 0.04
CCDC57-211ENST00000578187 STRBPQ96SI9 672 aaKnown RBP15.32■□□□□ 0.04
CCDC57-211ENST00000578187 CWC22Q9HCG8 908 aaKnown RBP15.32■□□□□ 0.04
CCDC57-211ENST00000578187 CABP5Q9NP86 173 aa15.32■□□□□ 0.04
CCDC57-211ENST00000578187 PCDH10Q9P2E7 1040 aa15.32■□□□□ 0.04
CCDC57-211ENST00000578187 GPAA1O43292 621 aa15.31■□□□□ 0.04
CCDC57-211ENST00000578187 GH2P01242 217 aa15.31■□□□□ 0.04
CCDC57-211ENST00000578187 PLCD1P51178 756 aa15.31■□□□□ 0.04
CCDC57-211ENST00000578187 USP14P54578 494 aa15.31■□□□□ 0.04
CCDC57-211ENST00000578187 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
CCDC57-211ENST00000578187 GPRC5AQ8NFJ5 357 aa15.31■□□□□ 0.04
CCDC57-211ENST00000578187 SHISA4Q96DD7 197 aa15.31■□□□□ 0.04
CCDC57-211ENST00000578187 UNC93B1Q9H1C4 597 aa15.31■□□□□ 0.04
CCDC57-211ENST00000578187 MCM9Q9NXL9 1143 aa15.31■□□□□ 0.04
CCDC57-211ENST00000578187 MORF4L1Q9UBU8 362 aa15.31■□□□□ 0.04
CCDC57-211ENST00000578187 SLC4A4Q9Y6R1 1079 aa15.31■□□□□ 0.04
CCDC57-211ENST00000578187 KIAA0100Q14667 2235 aaKnown RBP15.31■□□□□ 0.04
CCDC57-211ENST00000578187 FARP2O94887 1054 aaPredicted RBP15.3■□□□□ 0.04
CCDC57-211ENST00000578187 SGPL1O95470 568 aa15.3■□□□□ 0.04
CCDC57-211ENST00000578187 TFRCP02786 760 aaKnown RBP15.3■□□□□ 0.04
CCDC57-211ENST00000578187 HMGCRP04035 888 aa15.3■□□□□ 0.04
CCDC57-211ENST00000578187 HERVK_113P62684 666 aa15.3■□□□□ 0.04
CCDC57-211ENST00000578187 GABPAQ06546 454 aa15.3■□□□□ 0.04
CCDC57-211ENST00000578187 RAB3GAP1Q15042 981 aa15.3■□□□□ 0.04
CCDC57-211ENST00000578187 ABCB5Q2M3G0 1257 aa15.3■□□□□ 0.04
CCDC57-211ENST00000578187 HABP4Q5JVS0 413 aaKnown RBP15.3■□□□□ 0.04
CCDC57-211ENST00000578187 TATDN1Q6P1N9 297 aa15.3■□□□□ 0.04
CCDC57-211ENST00000578187 SEC62Q99442 399 aaKnown RBP15.3■□□□□ 0.04
CCDC57-211ENST00000578187 GREB1LQ9C091 1923 aaPredicted RBP15.29■□□□□ 0.04
CCDC57-211ENST00000578187 TRIM6-TRIM34B2RNG4 842 aa15.29■□□□□ 0.04
CCDC57-211ENST00000578187 GNAT2P19087 354 aa15.29■□□□□ 0.04
CCDC57-211ENST00000578187 MAPK4P31152 587 aa15.29■□□□□ 0.04
CCDC57-211ENST00000578187 EVX2Q03828 476 aa15.29■□□□□ 0.04
CCDC57-211ENST00000578187 GIMAP6Q6P9H5 292 aa15.29■□□□□ 0.04
CCDC57-211ENST00000578187 CENPQQ7L2Z9 268 aaPredicted RBP15.29■□□□□ 0.04
CCDC57-211ENST00000578187 AMOTL1Q8IY63 956 aa15.29■□□□□ 0.04
CCDC57-211ENST00000578187 SOCS4Q8WXH5 440 aa15.29■□□□□ 0.04
CCDC57-211ENST00000578187 GSG1L2A8MUP6 293 aa15.28■□□□□ 0.04
CCDC57-211ENST00000578187 NEFLP07196 543 aa15.28■□□□□ 0.04
CCDC57-211ENST00000578187 CYP2D6P10635 497 aa15.28■□□□□ 0.04
CCDC57-211ENST00000578187 SHMT1P34896 483 aa15.28■□□□□ 0.04
CCDC57-211ENST00000578187 TRMT44Q8IYL2 757 aaKnown RBP15.28■□□□□ 0.04
CCDC57-211ENST00000578187 DDRGK1Q96HY6 314 aa15.28■□□□□ 0.04
CCDC57-211ENST00000578187 DEFB118Q96PH6 123 aa15.28■□□□□ 0.04
CCDC57-211ENST00000578187 P2RX7Q99572 595 aaKnown RBP15.28■□□□□ 0.04
CCDC57-211ENST00000578187 NUDT12Q9BQG2 462 aa15.28■□□□□ 0.04
CCDC57-211ENST00000578187 EPB41L4AQ9HCS5 686 aaPredicted RBP15.28■□□□□ 0.04
CCDC57-211ENST00000578187 ARPP21Q9UBL0 812 aaPredicted RBP15.28■□□□□ 0.04
CCDC57-211ENST00000578187 NR2E3Q9Y5X4 410 aa15.28■□□□□ 0.04
CCDC57-211ENST00000578187 LAMA4Q16363 1823 aa15.28■□□□□ 0.04
CCDC57-211ENST00000578187 ROBO3Q96MS0 1386 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L15C9J2P7 530 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L13C9JLJ4 530 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L12C9JPN9 530 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L11C9JVI0 530 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L21D6R901 530 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L18D6R9N7 530 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L22D6RA61 530 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L17D6RBQ6 530 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L19D6RCP7 530 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms