RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 SETDB1Q15047 1291 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 EXOSC6Q5RKV6 272 aaKnown RBP6.46□□□□□ -1.38
KRT39-202ENST00000578029 FOXB2Q5VYV0 432 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 HEATR6Q6AI08 1181 aaKnown RBP6.46□□□□□ -1.38
KRT39-202ENST00000578029 JAMLQ86YT9 394 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 SCUBE1Q8IWY4 988 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 KCT2Q8NC54 265 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 ZNF417Q8TAU3 575 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 EXOC2Q96KP1 924 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 CCDC74BQ96LY2 380 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 ZNF587Q96SQ5 575 aaPredicted RBP6.46□□□□□ -1.38
KRT39-202ENST00000578029 IER2Q9BTL4 223 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 MAPRE3Q9UPY8 281 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 RAPGEF3O95398 923 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 TP53P04637 393 aaPredicted RBP6.45□□□□□ -1.38
KRT39-202ENST00000578029 PMLP29590 882 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 CDKN1CP49918 316 aaPredicted RBP6.45□□□□□ -1.38
KRT39-202ENST00000578029 FAM209AQ5JX71 171 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 WWC2Q6AWC2 1192 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 CDC37L1Q7L3B6 337 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 PPFIBP1Q86W92 1011 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 DDX42Q86XP3 938 aaKnown RBP eCLIP6.45□□□□□ -1.38
KRT39-202ENST00000578029 TMEM192Q8IY95 271 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 GALNT11Q8NCW6 608 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 RNF214Q8ND24 703 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 MRPL4Q9BYD3 311 aaKnown RBP6.45□□□□□ -1.38
KRT39-202ENST00000578029 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.45□□□□□ -1.38
KRT39-202ENST00000578029 ARHGEF4Q9NR80 690 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 FAN1Q9Y2M0 1017 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 SUGT1Q9Y2Z0 365 aa6.45□□□□□ -1.38
KRT39-202ENST00000578029 TM4SF5O14894 197 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 TMPRSS2O15393 492 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 DDX3YO15523 660 aaKnown RBP6.44□□□□□ -1.38
KRT39-202ENST00000578029 CLEC3AO75596 197 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 EPHX1P07099 455 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 POU3F3P20264 500 aaPredicted RBP6.44□□□□□ -1.38
KRT39-202ENST00000578029 EVA1CP58658 441 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 LRRN4CLQ8ND94 238 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 PPP1R14AQ96A00 147 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 CCDC136Q96JN2 1154 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 HAUS7Q99871 368 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 PRDM6Q9NQX0 595 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 INTS7Q9NVH2 962 aaKnown RBP6.44□□□□□ -1.38
KRT39-202ENST00000578029 FAM86C1Q9NVL1 165 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 CRIM1Q9NZV1 1036 aa6.44□□□□□ -1.38
KRT39-202ENST00000578029 MAGEC2Q9UBF1 373 aaPredicted RBP6.44□□□□□ -1.38
KRT39-202ENST00000578029 DNAJC25-GNG10A0A024R161 153 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 ADAM11O75078 769 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 UBOX5O94941 541 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 DLGAP3O95886 979 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 CPEP16870 476 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 PPP2R2AP63151 447 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 SUMO1P63165 101 aaKnown RBP6.43□□□□□ -1.38
KRT39-202ENST00000578029 AKAP4Q5JQC9 854 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 TDRD10Q5VZ19 366 aaKnown RBP6.43□□□□□ -1.38
KRT39-202ENST00000578029 C8orf86Q6ZUL3 223 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 CHSY3Q70JA7 882 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 RNF180Q86T96 592 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 FMNL3Q8IVF7 1028 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 CCDC144CPQ8IYA2 1237 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 GPR161Q8N6U8 529 aaKnown RBP6.43□□□□□ -1.38
KRT39-202ENST00000578029 KLHL25Q9H0H3 589 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 GBP3Q9H0R5 595 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 ATXN3LQ9H3M9 355 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 SUSD2Q9UGT4 822 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 TCEAL9Q9UHQ7 104 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 PPP1R9AQ9ULJ8 1098 aa6.43□□□□□ -1.38
KRT39-202ENST00000578029 SPDYE3A6NKU9 549 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 GSG1L2A8MUP6 293 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 C9IYK1 514 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 ITGAVP06756 1048 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 FGFR1P11362 822 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 CAP2P40123 477 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 MAP7Q14244 749 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 FOXD4L6Q3SYB3 417 aaPredicted RBP6.42□□□□□ -1.38
KRT39-202ENST00000578029 BRDTQ58F21 947 aaPredicted RBP6.42□□□□□ -1.38
KRT39-202ENST00000578029 AXDND1Q5T1B0 1012 aaPredicted RBP6.42□□□□□ -1.38
KRT39-202ENST00000578029 YOD1Q5VVQ6 348 aaPredicted RBP6.42□□□□□ -1.38
KRT39-202ENST00000578029 FOXD4L3Q6VB84 417 aaPredicted RBP6.42□□□□□ -1.38
KRT39-202ENST00000578029 ADAT2Q7Z6V5 191 aaKnown RBP6.42□□□□□ -1.38
KRT39-202ENST00000578029 LRRTM3Q86VH5 581 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 NPAS3Q8IXF0 933 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 DMRTC2Q8IXT2 367 aaPredicted RBP6.42□□□□□ -1.38
KRT39-202ENST00000578029 DTWD1Q8N5C7 304 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 UBR7Q8N806 425 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 BAHD1Q8TBE0 780 aaPredicted RBP6.42□□□□□ -1.38
KRT39-202ENST00000578029 CYB5D2Q8WUJ1 264 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 EDARADDQ8WWZ3 215 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 CLUHP3Q96NS8 147 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 FANCD2OSQ96PS1 177 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 FAM126AQ9BYI3 521 aaPredicted RBP6.42□□□□□ -1.38
KRT39-202ENST00000578029 FBRSQ9HAH7 460 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 DISC1Q9NRI5 854 aa6.42□□□□□ -1.38
KRT39-202ENST00000578029 NXF1Q9UBU9 619 aaKnown RBP6.42□□□□□ -1.38
KRT39-202ENST00000578029 NOP56O00567 594 aaKnown RBP6.41□□□□□ -1.38
KRT39-202ENST00000578029 PRODHO43272 600 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 PPM1BO75688 479 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 PABPC1P11940 636 aaKnown RBP6.41□□□□□ -1.38
KRT39-202ENST00000578029 NTF4P34130 210 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 SRSF11Q05519 484 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms