RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 GOLGA6AQ9NYA3 693 aa12.19□□□□□ -0.46
RNF43-203ENST00000577716 RPL13P26373 211 aaKnown RBP12.18□□□□□ -0.46
RNF43-203ENST00000577716 CCDC121Q6ZUS5 278 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 TICAM2Q86XR7 235 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 NDUFAB1O14561 156 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 PDE8BO95263 885 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 EIF6P56537 245 aaKnown RBP12.18□□□□□ -0.46
RNF43-203ENST00000577716 KIF23Q02241 960 aaPredicted RBP12.18□□□□□ -0.46
RNF43-203ENST00000577716 PTPN21Q16825 1174 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 SPATA1Q5VX52 437 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 RABEP2Q9H5N1 569 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 FAM207AQ9NSI2 230 aaPredicted RBP12.18□□□□□ -0.46
RNF43-203ENST00000577716 SAR1BQ9Y6B6 198 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 TMEM110-MUSTN1A8MSY1 372 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 CYP2E1P05181 493 aaPredicted RBP12.18□□□□□ -0.46
RNF43-203ENST00000577716 PI16Q6UXB8 463 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 SND1Q7KZF4 910 aaKnown RBP eCLIP12.18□□□□□ -0.46
RNF43-203ENST00000577716 KRT25Q7Z3Z0 450 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 CCDC84Q86UT8 332 aaPredicted RBP12.18□□□□□ -0.46
RNF43-203ENST00000577716 PAF1Q8N7H5 531 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 TTC14Q96N46 770 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 GREM2Q9H772 168 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.462e-11■■■□□ 15.2
RNF43-203ENST00000577716 GOLGA6BA6NDN3 693 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 CETN3O15182 167 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 BCAMP50895 628 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 SLC9C1Q4G0N8 1177 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 CABP7Q86V35 215 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 RGS22Q8NE09 1264 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 BICD1Q96G01 975 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 NOX5Q96PH1 765 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 SELENOSQ9BQE4 189 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 CCDC87Q9NVE4 849 aa12.18□□□□□ -0.46
RNF43-203ENST00000577716 INO80Q9ULG1 1556 aaPredicted RBP12.17□□□□□ -0.46
RNF43-203ENST00000577716 IKBKBO14920 756 aa12.17□□□□□ -0.46
RNF43-203ENST00000577716 HERC4Q5GLZ8 1057 aaPredicted RBP12.17□□□□□ -0.46
RNF43-203ENST00000577716 KCNJ18B7U540 433 aa12.17□□□□□ -0.46
RNF43-203ENST00000577716 HPDP32754 393 aaPredicted RBP12.17□□□□□ -0.46
RNF43-203ENST00000577716 KCNJ12Q14500 433 aa12.17□□□□□ -0.46
RNF43-203ENST00000577716 ZSCAN26Q16670 478 aa12.17□□□□□ -0.46
RNF43-203ENST00000577716 GRIPAP1Q4V328 841 aa12.17□□□□□ -0.46
RNF43-203ENST00000577716 CCDC24Q8N4L8 307 aa12.17□□□□□ -0.46
RNF43-203ENST00000577716 GPHNQ9NQX3 736 aaPredicted RBP12.17□□□□□ -0.46
RNF43-203ENST00000577716 A0A1W2PRG0 241 aa12.17□□□□□ -0.46
RNF43-203ENST00000577716 PPP6R2O75170 966 aa12.17□□□□□ -0.46
RNF43-203ENST00000577716 USP37Q86T82 979 aa12.17□□□□□ -0.46
RNF43-203ENST00000577716 M0R2C6 588 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 RIMBP2O15034 1052 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 CIAO1O76071 339 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 PTGDRQ13258 359 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 TOB2Q14106 344 aaPredicted RBP12.16□□□□□ -0.46
RNF43-203ENST00000577716 MORC3Q14149 939 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 UBLCP1Q8WVY7 318 aaPredicted RBP12.16□□□□□ -0.46
RNF43-203ENST00000577716 NSRP1Q9H0G5 558 aaKnown RBP12.16□□□□□ -0.46
RNF43-203ENST00000577716 NLRC4Q9NPP4 1024 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 GNPATO15228 680 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 GYG1P46976 350 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 WHAMMP3Q1A5X7 153 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 CCDC25Q86WR0 208 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 WDR66Q8TBY9 1149 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 EEF2KMTQ96G04 330 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 CCDC114Q96M63 670 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 AIFM3Q96NN9 605 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
RNF43-203ENST00000577716 IFIH1Q9BYX4 1025 aaKnown RBP12.16□□□□□ -0.46
RNF43-203ENST00000577716 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■□□□ 13.6
RNF43-203ENST00000577716 MED23Q9ULK4 1368 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 VWA3BQ502W6 1294 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 TYW1BQ6NUM6 668 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 C2CD5Q86YS7 1000 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 PGBD1Q96JS3 809 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 PAIP2Q9BPZ3 127 aaKnown RBP12.16□□□□□ -0.46
RNF43-203ENST00000577716 CCDC77Q9BR77 488 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 LRRC7Q96NW7 1537 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 KIF4AO95239 1232 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 PLS1Q14651 629 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 EPHA10Q5JZY3 1008 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 RRAGAQ7L523 313 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 CEP57Q86XR8 500 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 ANKS4BQ8N8V4 417 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 SPTLC3Q9NUV7 552 aa12.16□□□□□ -0.46
RNF43-203ENST00000577716 IFT20Q8IY31 132 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 REXO1Q8N1G1 1221 aaKnown RBP12.15□□□□□ -0.46
RNF43-203ENST00000577716 SCLT1Q96NL6 688 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 PUS7LQ9H0K6 701 aaKnown RBP12.15□□□□□ -0.46
RNF43-203ENST00000577716 MTRF1LQ9UGC7 380 aaKnown RBP12.15□□□□□ -0.46
RNF43-203ENST00000577716 MED14O60244 1454 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 IGKV5-2P06315 115 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 ATP1A3P13637 1013 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 RAD51AP2Q09MP3 1159 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 FCHSD1Q86WN1 690 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 MAPKAPK5Q8IW41 473 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 BLIDQ8IZY5 108 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 CCDC26Q8TAB7 109 aa12.15□□□□□ -0.46
RNF43-203ENST00000577716 SYMPKQ92797 1274 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms