RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 COPS2P61201 443 aa8.54□□□□□ -1.04
CASC3-205ENST00000577605 TCP10Q12799 353 aa8.54□□□□□ -1.04
CASC3-205ENST00000577605 LRRFIP1Q32MZ4 808 aaKnown RBP8.54□□□□□ -1.04
CASC3-205ENST00000577605 NOL9Q5SY16 702 aaKnown RBP8.54□□□□□ -1.04
CASC3-205ENST00000577605 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
CASC3-205ENST00000577605 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.54□□□□□ -1.04
CASC3-205ENST00000577605 FOXP4Q8IVH2 680 aaPredicted RBP8.54□□□□□ -1.04
CASC3-205ENST00000577605 TNS4Q8IZW8 715 aa8.54□□□□□ -1.04
CASC3-205ENST00000577605 GCC1Q96CN9 775 aa8.54□□□□□ -1.04
CASC3-205ENST00000577605 OPTNQ96CV9 577 aa8.54□□□□□ -1.04
CASC3-205ENST00000577605 WRNIP1Q96S55 665 aa8.54□□□□□ -1.04
CASC3-205ENST00000577605 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.54□□□□□ -1.048e-7■□□□□ 10.9
CASC3-205ENST00000577605 SNRKQ9NRH2 765 aa8.54□□□□□ -1.04
CASC3-205ENST00000577605 GINM1Q9NU53 330 aa8.54□□□□□ -1.04
CASC3-205ENST00000577605 TLR7Q9NYK1 1049 aaKnown RBP8.54□□□□□ -1.04
CASC3-205ENST00000577605 HERC5Q9UII4 1024 aaKnown RBP8.54□□□□□ -1.04
CASC3-205ENST00000577605 RFX7Q2KHR2 1363 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 CTNND1O60716 968 aaKnown RBP8.53□□□□□ -1.04
CASC3-205ENST00000577605 TRPA1O75762 1119 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 IDH1O75874 414 aaKnown RBP8.53□□□□□ -1.04
CASC3-205ENST00000577605 CYP7A1P22680 504 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 NFIAQ12857 509 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 PPIL2Q13356 520 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 SNAPC2Q13487 334 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 HDAC1Q13547 482 aaPredicted RBP8.53□□□□□ -1.04
CASC3-205ENST00000577605 VGLL4Q14135 290 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 ARHGEF6Q15052 776 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 PKN2Q16513 984 aaKnown RBP8.53□□□□□ -1.04
CASC3-205ENST00000577605 COL13A1Q5TAT6 717 aaPredicted RBP8.53□□□□□ -1.04
CASC3-205ENST00000577605 TICAM2Q86XR7 235 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 TEX11Q8IYF3 940 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 HAUS7Q99871 368 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
CASC3-205ENST00000577605 PRR14Q9BWN1 585 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 OSBPL5Q9H0X9 879 aaPredicted RBP8.53□□□□□ -1.04
CASC3-205ENST00000577605 IL21Q9HBE4 155 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 PIH1D3Q9NQM4 214 aaKnown RBP8.53□□□□□ -1.04
CASC3-205ENST00000577605 ECHDC1Q9NTX5 307 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 PI4KBQ9UBF8 816 aa8.53□□□□□ -1.04
CASC3-205ENST00000577605 CXCL11O14625 94 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 ERC2O15083 957 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 HLA-DOAP06340 250 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 HMGB1P09429 215 aaKnown RBP8.52□□□□□ -1.05
CASC3-205ENST00000577605 SLC9C2Q5TAH2 1124 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 MIGA2Q7L4E1 593 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 TTC6Q86TZ1 520 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 SCYL3Q8IZE3 742 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 ZNF384Q8TF68 577 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 ZNF516Q92618 1163 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 CLMNQ96JQ2 1002 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 ZIC5Q96T25 663 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 RWDD1Q9H446 243 aaPredicted RBP8.52□□□□□ -1.05
CASC3-205ENST00000577605 ELP3Q9H9T3 547 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 PICK1Q9NRD5 415 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 PAG1Q9NWQ8 432 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 AATFQ9NY61 560 aaKnown RBP eCLIP8.52□□□□□ -1.05
CASC3-205ENST00000577605 SNCAIPQ9Y6H5 919 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 TTC41PQ6P2S7 1318 aa8.52□□□□□ -1.05
CASC3-205ENST00000577605 MAGEB6P1A0A0J9YX57 407 aa8.51□□□□□ -1.05
CASC3-205ENST00000577605 PHF20L1A8MW92 1017 aa8.51□□□□□ -1.05
CASC3-205ENST00000577605 ZFYP08048 801 aaPredicted RBP8.51□□□□□ -1.05
CASC3-205ENST00000577605 PICALMQ13492 652 aa8.51□□□□□ -1.05
CASC3-205ENST00000577605 UBE3CQ15386 1083 aa8.51□□□□□ -1.05
CASC3-205ENST00000577605 FASTKD5Q7L8L6 764 aaKnown RBP8.51□□□□□ -1.05
CASC3-205ENST00000577605 METTL16Q86W50 562 aaKnown RBP8.51□□□□□ -1.05
CASC3-205ENST00000577605 MAGEB6Q8N7X4 407 aa8.51□□□□□ -1.05
CASC3-205ENST00000577605 SH3RF3Q8TEJ3 882 aaPredicted RBP8.51□□□□□ -1.05
CASC3-205ENST00000577605 ZKSCAN4Q969J2 545 aaPredicted RBP8.51□□□□□ -1.05
CASC3-205ENST00000577605 TRIM34Q9BYJ4 488 aa8.51□□□□□ -1.05
CASC3-205ENST00000577605 CRNKL1Q9BZJ0 848 aaKnown RBP8.51□□□□□ -1.05
CASC3-205ENST00000577605 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.51□□□□□ -1.05
CASC3-205ENST00000577605 ZFYVE28Q9HCC9 887 aa8.51□□□□□ -1.05
CASC3-205ENST00000577605 DDX4Q9NQI0 724 aaKnown RBP8.51□□□□□ -1.05
CASC3-205ENST00000577605 PCDHB3Q9Y5E6 796 aa8.51□□□□□ -1.05
CASC3-205ENST00000577605 ECM29Q5VYK3 1845 aa8.51□□□□□ -1.05
CASC3-205ENST00000577605 CCL15-CCL14A0A0B4J2E2 113 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 DDTLA6NHG4 134 aaPredicted RBP8.5□□□□□ -1.05
CASC3-205ENST00000577605 GPR25O00155 361 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 GOLIM4O00461 696 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 USP5P45974 858 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 CCL15Q16663 113 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 KMT5BQ4FZB7 885 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 SH3BP5LQ7L8J4 393 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 ANKRD23Q86SG2 305 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 ZFPM1Q8IX07 1006 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 TGFBRAP1Q8WUH2 860 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 CRBNQ96SW2 442 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 DNAJC2Q99543 621 aaKnown RBP8.5□□□□□ -1.05
CASC3-205ENST00000577605 TMUB1Q9BVT8 246 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 EHD4Q9H223 541 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 BOLA2Q9H3K6 86 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 ANTXR1Q9H6X2 564 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 AS3MTQ9HBK9 375 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 FZD1Q9UP38 647 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 KCNH4Q9UQ05 1017 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 SLC45A1Q9Y2W3 748 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 PCDHB15Q9Y5E8 787 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 FLT1P17948 1338 aa8.5□□□□□ -1.05
CASC3-205ENST00000577605 DDX11L8A8MPP1 907 aa8.49□□□□□ -1.05
CASC3-205ENST00000577605 FKTNO75072 461 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms