RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 FAM43AQ8N2R8 423 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PARK7Q99497 189 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 SH2D4AQ9H788 454 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 ZFYVE28Q9HCC9 887 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PRDM10Q9NQV6 1147 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 TSKSQ9UJT2 592 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 SLC45A1Q9Y2W3 748 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 GREB1LQ9C091 1923 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 CASP8AP2Q9UKL3 1982 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 SGSM2O43147 1006 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 LBX1P52954 281 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 MOGSQ13724 837 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PPP4R3BQ5MIZ7 849 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 USP17L2Q6R6M4 530 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 STK11IPQ8N1F8 1099 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 RNF41Q9H4P4 317 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 KANSL2Q9H9L4 492 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 ARHGEF10LQ9HCE6 1279 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PNMA3Q9UL41 463 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 AGTPBP1Q9UPW5 1226 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PLIN4Q96Q06 1357 aa15.09■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PDHXO00330 501 aa15.08■□□□□ 0
CDK5RAP3-203ENST00000577442 ORC4O43929 436 aa15.08■□□□□ 0
CDK5RAP3-203ENST00000577442 CDC45O75419 566 aa15.08■□□□□ 0
CDK5RAP3-203ENST00000577442 GUCY1A2P33402 732 aa15.08■□□□□ 0
CDK5RAP3-203ENST00000577442 NT5C2P49902 561 aa15.08■□□□□ 0
CDK5RAP3-203ENST00000577442 CRHR2Q13324 411 aa15.08■□□□□ 0
CDK5RAP3-203ENST00000577442 IMMTQ16891 758 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-203ENST00000577442 KIAA1211Q6ZU35 1233 aa15.08■□□□□ 0
CDK5RAP3-203ENST00000577442 KIAA1683Q9H0B3 1180 aa15.08■□□□□ 0
CDK5RAP3-203ENST00000577442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.08■□□□□ 0
CDK5RAP3-203ENST00000577442 ZNF213O14771 459 aa15.07■□□□□ 0
CDK5RAP3-203ENST00000577442 PRDM1O75626 825 aa15.07■□□□□ 0
CDK5RAP3-203ENST00000577442 TBC1D8O95759 1140 aa15.07■□□□□ 0
CDK5RAP3-203ENST00000577442 TSPY3P0CV98 308 aa15.07■□□□□ 0
CDK5RAP3-203ENST00000577442 TSPY8P0CW00 308 aa15.07■□□□□ 0
CDK5RAP3-203ENST00000577442 CTDSPL2Q05D32 466 aa15.07■□□□□ 0
CDK5RAP3-203ENST00000577442 GPAT2Q6NUI2 795 aa15.07■□□□□ 0
CDK5RAP3-203ENST00000577442 C12orf42Q96LP6 360 aa15.07■□□□□ 0
CDK5RAP3-203ENST00000577442 GPR25O00155 361 aa15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 HAND2P61296 217 aa15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 AKNAD1Q5T1N1 836 aa15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 MFSD6Q6ZSS7 791 aa15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 NEDD1Q8NHV4 660 aa15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 ACER1Q8TDN7 264 aa15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 STAG1Q8WVM7 1258 aa15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 ESYT1Q9BSJ8 1104 aa15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 IL25Q9H293 177 aa15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 TOMM22Q9NS69 142 aa15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-203ENST00000577442 MYH4Q9Y623 1939 aa15.05■□□□□ 0
CDK5RAP3-203ENST00000577442 TSPY2A6NKD2 308 aa15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 RANBP6O60518 1105 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 TLR2O60603 784 aa15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 FKTNO75072 461 aa15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 FGRP09769 529 aa15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 OSBPP22059 807 aa15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 IRX3P78415 501 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 ATP2B2Q01814 1243 aa15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 TREML2Q5T2D2 321 aa15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 SMCR8Q8TEV9 937 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 LPAR1Q92633 364 aa15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 NYAP2Q9P242 653 aa15.05■□□□□ -0
CDK5RAP3-203ENST00000577442 EEF2P13639 858 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 HOXA7P31268 230 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 TFAP4Q01664 338 aa15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 ZYXQ15942 572 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 CLEC10AQ8IUN9 316 aa15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 VCPKMTQ9H867 229 aa15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 GOPCQ9HD26 462 aa15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 EMILIN3Q9NT22 766 aa15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 SYNPO2Q9UMS6 1093 aa15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 TMX2Q9Y320 296 aa15.04■□□□□ -0
CDK5RAP3-203ENST00000577442 ADGRA2Q96PE1 1338 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 IGKV6D-41A0A0C4DH26 115 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 TTLL1O95922 423 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 VCAM1P19320 739 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 FAM47AQ5JRC9 791 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 RRP12Q5JTH9 1297 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 TBC1D10CQ8IV04 446 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 GTF3C2Q8WUA4 911 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 ZNF296Q8WUU4 475 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 ESR2Q92731 530 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 ERO1AQ96HE7 468 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 R3HDMLQ9H3Y0 253 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 CNNM2Q9H8M5 875 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 MTMR4Q9NYA4 1195 aa15.03■□□□□ -0
CDK5RAP3-203ENST00000577442 A0A1W2PRG0 241 aa15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 USP17L15C9J2P7 530 aa15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 USP17L13C9JLJ4 530 aa15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 USP17L11C9JVI0 530 aa15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 USP17L18D6R9N7 530 aa15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 USP17L22D6RA61 530 aa15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 USP17L17D6RBQ6 530 aa15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 USP17L19D6RCP7 530 aa15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 USP17L20D6RJB6 530 aa15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 CYP2C8P10632 490 aa15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 GCLCP48506 637 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-203ENST00000577442 SP3Q02447 781 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms