RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.5■□□□□ 0.23
CUEDC1-203ENST00000577422 SOCS4Q8WXH5 440 aa16.5■□□□□ 0.23
CUEDC1-203ENST00000577422 NUDT12Q9BQG2 462 aa16.5■□□□□ 0.23
CUEDC1-203ENST00000577422 KIAA1683Q9H0B3 1180 aa16.5■□□□□ 0.23
CUEDC1-203ENST00000577422 NR2E3Q9Y5X4 410 aa16.5■□□□□ 0.23
CUEDC1-203ENST00000577422 EVI5O60447 810 aa16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 VCAM1P19320 739 aa16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 LBX2Q6XYB7 198 aa16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 CATSPERGQ6ZRH7 1159 aa16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 NECAB2Q7Z6G3 386 aa16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 TTC6Q86TZ1 520 aa16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 GTF3C2Q8WUA4 911 aaPredicted RBP16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 EDC3Q96F86 508 aaKnown RBP16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 PAGR1Q9BTK6 254 aa16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 RLFQ13129 1914 aa16.49■□□□□ 0.23
CUEDC1-203ENST00000577422 PFASO15067 1338 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 ZNF532Q9HCE3 1301 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 MAGEB6P1A0A0J9YX57 407 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 A0A1W2PRG0 241 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 USP17L15C9J2P7 530 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 USP17L13C9JLJ4 530 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 USP17L11C9JVI0 530 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 USP17L18D6R9N7 530 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 USP17L22D6RA61 530 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 USP17L17D6RBQ6 530 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 USP17L19D6RCP7 530 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 USP17L20D6RJB6 530 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 CACNB2Q08289 660 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 USP17L24Q0WX57 530 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 ABCB5Q2M3G0 1257 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 HSP90AB4PQ58FF6 505 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 LHX8Q68G74 356 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 RPAP2Q8IXW5 612 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 RABGAP1Q9Y3P9 1069 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 A0A0C4DFX4 3053 aa16.48■□□□□ 0.23
CUEDC1-203ENST00000577422 SMIM22K7EJ46 135 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 IGHA2P01877 340 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 CHGBP05060 677 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 SEPT2Q15019 361 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 TTF1Q15361 905 aaPredicted RBP16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 PLEKHH3Q7Z736 793 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 LCORLQ8N3X6 602 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 SDR42E1Q8WUS8 393 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 DCP1AQ9NPI6 582 aaPredicted RBP16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 FLRT1Q9NZU1 646 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 A0A0G2JMZ2 1700 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 FRMPD3Q5JV73 1810 aa16.47■□□□□ 0.23
CUEDC1-203ENST00000577422 SPDYE16A6NNV3 312 aaPredicted RBP16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 GOLIM4O00461 696 aa16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 SOX1O00570 391 aaPredicted RBP16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 CYP2D6P10635 497 aa16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 COL6A1P12109 1028 aa16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 CCND3P30281 292 aaPredicted RBP16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 USP14P54578 494 aa16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 KIAA1755Q5JYT7 1200 aa16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 CLASRPQ8N2M8 674 aaKnown RBP16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 FEZ1Q99689 392 aa16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 APBA2Q99767 749 aa16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 GDF15Q99988 308 aa16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 NBPF3Q9H094 633 aa16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 STAP2Q9UGK3 403 aa16.46■□□□□ 0.23
CUEDC1-203ENST00000577422 A0A1W2PPC1 479 aa16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 APBB1O00213 710 aa16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 ZKSCAN1P17029 563 aaPredicted RBP16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 RGS2P41220 211 aa16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 MAP2K5Q13163 448 aa16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 C11orf49Q9H6J7 331 aa16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 RPAP3Q9H6T3 665 aaPredicted RBP16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 MCM9Q9NXL9 1143 aa16.45■□□□□ 0.22
CUEDC1-203ENST00000577422 PRKAB2O43741 272 aa16.44■□□□□ 0.22
CUEDC1-203ENST00000577422 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
CUEDC1-203ENST00000577422 ADD2P35612 726 aa16.44■□□□□ 0.22
CUEDC1-203ENST00000577422 PDE3AQ14432 1141 aa16.44■□□□□ 0.22
CUEDC1-203ENST00000577422 GRB14Q14449 540 aa16.44■□□□□ 0.22
CUEDC1-203ENST00000577422 TRMT44Q8IYL2 757 aaKnown RBP16.44■□□□□ 0.22
CUEDC1-203ENST00000577422 C7orf61Q8IZ16 206 aa16.44■□□□□ 0.22
CUEDC1-203ENST00000577422 CRNKL1Q9BZJ0 848 aaKnown RBP16.44■□□□□ 0.22
CUEDC1-203ENST00000577422 DDX19BQ9UMR2 479 aa16.44■□□□□ 0.22
CUEDC1-203ENST00000577422 ZNF236Q9UL36 1845 aa16.43■□□□□ 0.22
CUEDC1-203ENST00000577422 RAB11FIP3O75154 756 aa16.43■□□□□ 0.22
CUEDC1-203ENST00000577422 HOXC6P09630 235 aa16.43■□□□□ 0.22
CUEDC1-203ENST00000577422 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
CUEDC1-203ENST00000577422 MS4A1P11836 297 aa16.43■□□□□ 0.22
CUEDC1-203ENST00000577422 ATP5JP18859 108 aa16.43■□□□□ 0.22
CUEDC1-203ENST00000577422 PTPREP23469 700 aa16.43■□□□□ 0.22
CUEDC1-203ENST00000577422 BMP8BP34820 402 aa16.43■□□□□ 0.22
CUEDC1-203ENST00000577422 DYNLL2Q96FJ2 89 aa16.43■□□□□ 0.22
CUEDC1-203ENST00000577422 BOLA2Q9H3K6 86 aa16.43■□□□□ 0.22
CUEDC1-203ENST00000577422 ARMT1Q9H993 441 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms