RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 U2AF1L4Q8WU68 220 aaKnown RBP18.03■□□□□ 0.48
MKS1-205ENST00000577315 HTATIP2Q9BUP3 242 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 KIAA1683Q9H0B3 1180 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 SWAP70Q9UH65 585 aa18.03■□□□□ 0.48
MKS1-205ENST00000577315 HMGCRP04035 888 aa18.02■□□□□ 0.48
MKS1-205ENST00000577315 CCAR1Q8IX12 1150 aaKnown RBP18.02■□□□□ 0.48
MKS1-205ENST00000577315 SOCS4Q8WXH5 440 aa18.02■□□□□ 0.48
MKS1-205ENST00000577315 EDC3Q96F86 508 aaKnown RBP18.02■□□□□ 0.48
MKS1-205ENST00000577315 DDRGK1Q96HY6 314 aa18.02■□□□□ 0.48
MKS1-205ENST00000577315 NUDT12Q9BQG2 462 aa18.02■□□□□ 0.48
MKS1-205ENST00000577315 GJD2Q9UKL4 321 aa18.02■□□□□ 0.48
MKS1-205ENST00000577315 ERVK-9P63128 1117 aa18.01■□□□□ 0.47
MKS1-205ENST00000577315 ERVK-24P63145 666 aa18.01■□□□□ 0.47
MKS1-205ENST00000577315 CATSPERGQ6ZRH7 1159 aa18.01■□□□□ 0.47
MKS1-205ENST00000577315 TRMT44Q8IYL2 757 aaKnown RBP18.01■□□□□ 0.47
MKS1-205ENST00000577315 SDR42E1Q8WUS8 393 aa18.01■□□□□ 0.47
MKS1-205ENST00000577315 GPATCH3Q96I76 525 aa18.01■□□□□ 0.47
MKS1-205ENST00000577315 DCTPP1Q9H773 170 aa18.01■□□□□ 0.47
MKS1-205ENST00000577315 PAK6Q9NQU5 681 aaPredicted RBP18.01■□□□□ 0.47
MKS1-205ENST00000577315 RBPJLQ9UBG7 517 aa18.01■□□□□ 0.47
MKS1-205ENST00000577315 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
MKS1-205ENST00000577315 CEP290O15078 2479 aa18.01■□□□□ 0.47
MKS1-205ENST00000577315 MBD4O95243 580 aa18■□□□□ 0.47
MKS1-205ENST00000577315 XRCC5P13010 732 aaKnown RBP18■□□□□ 0.47
MKS1-205ENST00000577315 CCNA1P78396 465 aa18■□□□□ 0.47
MKS1-205ENST00000577315 ZYXQ15942 572 aaKnown RBP18■□□□□ 0.47
MKS1-205ENST00000577315 ARMT1Q9H993 441 aa18■□□□□ 0.47
MKS1-205ENST00000577315 TXNRD2Q9NNW7 524 aa18■□□□□ 0.47
MKS1-205ENST00000577315 ECHDC1Q9NTX5 307 aa18■□□□□ 0.47
MKS1-205ENST00000577315 RPTORQ8N122 1335 aa17.99■□□□□ 0.47
MKS1-205ENST00000577315 MPHOSPH10O00566 681 aaKnown RBP17.99■□□□□ 0.47
MKS1-205ENST00000577315 FARP2O94887 1054 aaPredicted RBP17.99■□□□□ 0.47
MKS1-205ENST00000577315 TFRCP02786 760 aaKnown RBP17.99■□□□□ 0.47
MKS1-205ENST00000577315 LBX2Q6XYB7 198 aa17.99■□□□□ 0.47
MKS1-205ENST00000577315 TMEM179Q6ZVK1 233 aa17.99■□□□□ 0.47
MKS1-205ENST00000577315 UBE2Q1Q7Z7E8 422 aa17.99■□□□□ 0.47
MKS1-205ENST00000577315 DPF3Q92784 378 aa17.99■□□□□ 0.47
MKS1-205ENST00000577315 CCDC17Q96LX7 622 aa17.99■□□□□ 0.47
MKS1-205ENST00000577315 PAGR1Q9BTK6 254 aa17.99■□□□□ 0.47
MKS1-205ENST00000577315 SMARCA5O60264 1052 aaPredicted RBP17.98■□□□□ 0.47
MKS1-205ENST00000577315 GLRX3O76003 335 aaKnown RBP17.98■□□□□ 0.47
MKS1-205ENST00000577315 VCAM1P19320 739 aa17.98■□□□□ 0.47
MKS1-205ENST00000577315 GUCY1A2P33402 732 aa17.98■□□□□ 0.47
MKS1-205ENST00000577315 SEPT2Q15019 361 aa17.98■□□□□ 0.47
MKS1-205ENST00000577315 Q3C1V9 767 aa17.98■□□□□ 0.47
MKS1-205ENST00000577315 ACER1Q8TDN7 264 aa17.98■□□□□ 0.47
MKS1-205ENST00000577315 DEFB118Q96PH6 123 aa17.98■□□□□ 0.47
MKS1-205ENST00000577315 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.98■□□□□ 0.47
MKS1-205ENST00000577315 CWC22Q9HCG8 908 aaKnown RBP17.98■□□□□ 0.47
MKS1-205ENST00000577315 HMX1Q9NP08 348 aaPredicted RBP17.98■□□□□ 0.47
MKS1-205ENST00000577315 CYP2B6P20813 491 aa17.97■□□□□ 0.47
MKS1-205ENST00000577315 HABP4Q5JVS0 413 aaKnown RBP17.97■□□□□ 0.47
MKS1-205ENST00000577315 C12orf60Q5U649 245 aa17.97■□□□□ 0.47
MKS1-205ENST00000577315 GPR142Q7Z601 462 aa17.97■□□□□ 0.47
MKS1-205ENST00000577315 PLEKHH3Q7Z736 793 aa17.97■□□□□ 0.47
MKS1-205ENST00000577315 ANKLE1Q8NAG6 615 aa17.97■□□□□ 0.47
MKS1-205ENST00000577315 CRISPLD2Q9H0B8 497 aa17.97■□□□□ 0.47
MKS1-205ENST00000577315 SH2D4AQ9H788 454 aa17.97■□□□□ 0.47
MKS1-205ENST00000577315 SLC4A4Q9Y6R1 1079 aa17.97■□□□□ 0.47
MKS1-205ENST00000577315 PRKAB2O43741 272 aa17.96■□□□□ 0.47
MKS1-205ENST00000577315 RGS2P41220 211 aa17.96■□□□□ 0.47
MKS1-205ENST00000577315 LRRFIP1Q32MZ4 808 aaKnown RBP17.96■□□□□ 0.47
MKS1-205ENST00000577315 RPAP3Q9H6T3 665 aaPredicted RBP17.96■□□□□ 0.47
MKS1-205ENST00000577315 ARHGEF10LQ9HCE6 1279 aa17.96■□□□□ 0.47
MKS1-205ENST00000577315 NR2E3Q9Y5X4 410 aa17.96■□□□□ 0.47
MKS1-205ENST00000577315 RLFQ13129 1914 aa17.96■□□□□ 0.47
MKS1-205ENST00000577315 ZFYP08048 801 aaPredicted RBP17.95■□□□□ 0.46
MKS1-205ENST00000577315 CYP2D6P10635 497 aa17.95■□□□□ 0.46
MKS1-205ENST00000577315 ZKSCAN1P17029 563 aaPredicted RBP17.95■□□□□ 0.46
MKS1-205ENST00000577315 MORN1Q5T089 497 aa17.95■□□□□ 0.46
MKS1-205ENST00000577315 KBTBD3Q8NAB2 608 aa17.95■□□□□ 0.46
MKS1-205ENST00000577315 TRIB2Q92519 343 aa17.95■□□□□ 0.46
MKS1-205ENST00000577315 LPAR1Q92633 364 aa17.95■□□□□ 0.46
MKS1-205ENST00000577315 USP6NLQ92738 828 aa17.95■□□□□ 0.46
MKS1-205ENST00000577315 PORCNQ9H237 461 aa17.95■□□□□ 0.46
MKS1-205ENST00000577315 HOXC10Q9NYD6 342 aa17.95■□□□□ 0.46
MKS1-205ENST00000577315 PCDH10Q9P2E7 1040 aa17.95■□□□□ 0.46
MKS1-205ENST00000577315 ARPP21Q9UBL0 812 aaPredicted RBP17.95■□□□□ 0.46
MKS1-205ENST00000577315 ZNFX1Q9P2E3 1918 aaKnown RBP17.94■□□□□ 0.46
MKS1-205ENST00000577315 PARP14Q460N5 1801 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 USP17L12C9JPN9 530 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 USP17L21D6R901 530 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 CNMDO75829 334 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 CDK8P49336 464 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 COG2Q14746 738 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 GIMAP6Q6P9H5 292 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 C16orf86Q6ZW13 317 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 DYNLL2Q96FJ2 89 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 APBA2Q99767 749 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 PUS7LQ9H0K6 701 aaKnown RBP17.94■□□□□ 0.46
MKS1-205ENST00000577315 IVNS1ABPQ9Y6Y0 642 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 TTC41PQ6P2S7 1318 aa17.94■□□□□ 0.46
MKS1-205ENST00000577315 A0A1W2PRG0 241 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 SPDYE16A6NNV3 312 aaPredicted RBP17.93■□□□□ 0.46
MKS1-205ENST00000577315 H0YGN5 161 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 PEX10O60683 326 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 EVX2Q03828 476 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 ICA1Q05084 483 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 MAP2K5Q13163 448 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 SLFNL1Q499Z3 407 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms