RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-209ENST00000576012 CCDC122Q5T0U0 273 aa16.42■□□□□ 0.22
SCARF1-209ENST00000576012 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-209ENST00000576012 FAM89AQ96GI7 184 aa16.42■□□□□ 0.22
SCARF1-209ENST00000576012 PLIN2Q99541 437 aa16.42■□□□□ 0.22
SCARF1-209ENST00000576012 ADD3Q9UEY8 706 aaKnown RBP16.42■□□□□ 0.22
SCARF1-209ENST00000576012 WWC3Q9ULE0 1092 aa16.42■□□□□ 0.22
SCARF1-209ENST00000576012 ANKARQ7Z5J8 1434 aa16.42■□□□□ 0.22
SCARF1-209ENST00000576012 CACNA1FO60840 1977 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
SCARF1-209ENST00000576012 UBXN1Q04323 297 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 EZH2Q15910 746 aaKnown RBP16.41■□□□□ 0.22
SCARF1-209ENST00000576012 RASGRP2Q7LDG7 609 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 ZPR1O75312 459 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 PROSER2Q86WR7 435 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-209ENST00000576012 APPBP2Q92624 585 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 PCMTD1Q96MG8 357 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-209ENST00000576012 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 VPS54Q9P1Q0 977 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 GOLGA6CA6NDK9 693 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 SH2B2O14492 632 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-209ENST00000576012 GOLGA6DP0CG33 693 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 CYP27A1Q02318 531 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 KIAA1328Q86T90 577 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
SCARF1-209ENST00000576012 CENPHQ9H3R5 247 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 GOLGA6AQ9NYA3 693 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 HPCAL4Q9UM19 191 aa16.41■□□□□ 0.22
SCARF1-209ENST00000576012 CXCR5P32302 372 aa16.4■□□□□ 0.22
SCARF1-209ENST00000576012 ARHGAP25P42331 645 aa16.4■□□□□ 0.22
SCARF1-209ENST00000576012 KRT31Q15323 416 aa16.4■□□□□ 0.22
SCARF1-209ENST00000576012 SPATA1Q5VX52 437 aa16.4■□□□□ 0.22
SCARF1-209ENST00000576012 SND1Q7KZF4 910 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCARF1-209ENST00000576012 FAM217BQ9NTX9 383 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-209ENST00000576012 ABHD10Q9NUJ1 306 aa16.4■□□□□ 0.22
SCARF1-209ENST00000576012 ZSWIM5Q9P217 1185 aa16.4■□□□□ 0.22
SCARF1-209ENST00000576012 FAM169AQ9Y6X4 670 aa16.4■□□□□ 0.22
SCARF1-209ENST00000576012 FAM76AQ8TAV0 307 aa16.4■□□□□ 0.22
SCARF1-209ENST00000576012 SMCR8Q8TEV9 937 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-209ENST00000576012 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
SCARF1-209ENST00000576012 CWC25Q9NXE8 425 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-209ENST00000576012 EBAG9O00559 213 aa16.39■□□□□ 0.21
SCARF1-209ENST00000576012 ACTN4O43707 911 aaKnown RBP16.39■□□□□ 0.21
SCARF1-209ENST00000576012 PTPREP23469 700 aa16.39■□□□□ 0.21
SCARF1-209ENST00000576012 GNGT1P63211 74 aa16.39■□□□□ 0.21
SCARF1-209ENST00000576012 CNGA4Q8IV77 575 aa16.39■□□□□ 0.21
SCARF1-209ENST00000576012 TTF2Q9UNY4 1162 aaKnown RBP16.39■□□□□ 0.21
SCARF1-209ENST00000576012 WNT7AO00755 349 aa16.39■□□□□ 0.21
SCARF1-209ENST00000576012 SF3A3Q12874 501 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCARF1-209ENST00000576012 APTXQ7Z2E3 356 aaKnown RBP16.39■□□□□ 0.21
SCARF1-209ENST00000576012 HDAC7Q8WUI4 952 aa16.39■□□□□ 0.21
SCARF1-209ENST00000576012 SYMPKQ92797 1274 aaKnown RBP16.39■□□□□ 0.21
SCARF1-209ENST00000576012 MYCBPQ99417 103 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-209ENST00000576012 WHAMMP3Q1A5X7 153 aa16.39■□□□□ 0.21
SCARF1-209ENST00000576012 EARS2Q5JPH6 523 aaKnown RBP16.39■□□□□ 0.21
SCARF1-209ENST00000576012 SH2D3CQ8N5H7 860 aa16.39■□□□□ 0.21
SCARF1-209ENST00000576012 EHD2Q9NZN4 543 aa16.39■□□□□ 0.21
SCARF1-209ENST00000576012 EPN1Q9Y6I3 576 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-209ENST00000576012 TRIM49BA6NDI0 452 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 ATP2B2Q01814 1243 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 NTRK3Q16288 839 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 SELENOOQ9BVL4 669 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 MED4Q9NPJ6 270 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.38■□□□□ 0.21
SCARF1-209ENST00000576012 LRRC37A3O60309 1634 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 TOPAZ1Q8N9V7 1692 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 FMN2Q9NZ56 1722 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 SMIM22K7EJ46 135 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 TDO2P48775 406 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 MAP9Q49MG5 647 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 SAR1BQ9Y6B6 198 aa16.38■□□□□ 0.21
SCARF1-209ENST00000576012 GOLGA6BA6NDN3 693 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 PRKAB2O43741 272 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 CABP4P57796 275 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 EFCAB13Q8IY85 973 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 RASSF8Q8NHQ8 419 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 FAM212AQ96EL1 285 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 PAGE5Q96GU1 130 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 NCAPGQ9BPX3 1015 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 CAPN7Q9Y6W3 813 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 ZNF532Q9HCE3 1301 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 MYO1FO00160 1098 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 GPTP24298 496 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 MCAMP43121 646 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 SARSP49591 514 aaKnown RBP16.37■□□□□ 0.21
SCARF1-209ENST00000576012 IRAK1P51617 712 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 USP14P54578 494 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 CASP7P55210 303 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 PDCLQ13371 301 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 CYP26C1Q6V0L0 522 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 JAKMIP2Q96AA8 810 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 GDAQ9Y2T3 454 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 PDE2AO00408 941 aaPredicted RBP16.37■□□□□ 0.21
SCARF1-209ENST00000576012 MMP1P03956 469 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 MMS22LQ6ZRQ5 1243 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 KRT28Q7Z3Y7 464 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 TMTC1Q8IUR5 882 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms