RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 KCNB2Q92953 911 aa10.13□□□□□ -0.79
NUP88-211ENST00000575976 OTUD5Q96G74 571 aa10.13□□□□□ -0.79
NUP88-211ENST00000575976 WNK4Q96J92 1243 aa10.13□□□□□ -0.79
NUP88-211ENST00000575976 SNX14Q9Y5W7 946 aa10.13□□□□□ -0.79
NUP88-211ENST00000575976 ZHX2Q9Y6X8 837 aa10.13□□□□□ -0.79
NUP88-211ENST00000575976 OTOFQ9HC10 1997 aa10.13□□□□□ -0.79
NUP88-211ENST00000575976 IGKV6D-41A0A0C4DH26 115 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 FAM155AB1AL88 458 aaPredicted RBP10.12□□□□□ -0.79
NUP88-211ENST00000575976 KDM4AO75164 1064 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 MAP2K2P36507 400 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 PPATQ06203 517 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 TRDNQ13061 729 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 SPP2Q13103 211 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 GRM1Q13255 1194 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 COL9A3Q14050 684 aaPredicted RBP10.12□□□□□ -0.79
NUP88-211ENST00000575976 TSGA10IPQ3SY00 556 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 SPRYD7Q5W111 196 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 CYB5R4Q7L1T6 521 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 SIAH1Q8IUQ4 282 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 NCOA7Q8NI08 942 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 ESR2Q92731 530 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 CCDC102AQ96A19 550 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 CAPNS2Q96L46 248 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 WDR18Q9BV38 432 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 BACH2Q9BYV9 841 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 KRT23Q9C075 422 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 CNNM2Q9H8M5 875 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 ZSWIM5Q9P217 1185 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 AFG3L2Q9Y4W6 797 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 LAMA4Q16363 1823 aa10.12□□□□□ -0.79
NUP88-211ENST00000575976 DOCK1Q14185 1865 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 A0A1W2PRG0 241 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 IRF6O14896 467 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 NMT2O60551 498 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 EEF2P13639 858 aaKnown RBP10.11□□□□□ -0.79
NUP88-211ENST00000575976 ZKSCAN1P17029 563 aaPredicted RBP10.11□□□□□ -0.79
NUP88-211ENST00000575976 MCCP23508 829 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 ICA1Q05084 483 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 PPIL2Q13356 520 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 ADCK5Q3MIX3 580 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 RALYLQ86SE5 291 aaKnown RBP10.11□□□□□ -0.79
NUP88-211ENST00000575976 MB21D2Q8IYB1 491 aaPredicted RBP10.11□□□□□ -0.79
NUP88-211ENST00000575976 ZNF280CQ8ND82 737 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 ACER1Q8TDN7 264 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 CEP95Q96GE4 821 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 NEK1Q96PY6 1258 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 ZIC5Q96T25 663 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 ZKSCAN3Q9BRR0 538 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 MCOLN1Q9GZU1 580 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 KANSL2Q9H9L4 492 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 AS3MTQ9HBK9 375 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 IL17RBQ9NRM6 502 aa10.11□□□□□ -0.79
NUP88-211ENST00000575976 TRIM75PA6NK02 468 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 CXCL11O14625 94 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 AOC2O75106 756 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 ZBTB48P10074 688 aaPredicted RBP10.1□□□□□ -0.79
NUP88-211ENST00000575976 NT5C2P49902 561 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 ATP2B2Q01814 1243 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 KIF23Q02241 960 aaPredicted RBP10.1□□□□□ -0.79
NUP88-211ENST00000575976 KRT32Q14532 448 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 CHST3Q7LGC8 479 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 MS4A4AQ96JQ5 239 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 TBC1D2Q9BYX2 928 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 TCP11L1Q9NUJ3 509 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 MTMR4Q9NYA4 1195 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 CLIP2Q9UDT6 1046 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 KCNH4Q9UQ05 1017 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 PLIN4Q96Q06 1357 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 ATAD5Q96QE3 1844 aa10.1□□□□□ -0.79
NUP88-211ENST00000575976 USP17L10C9JJH3 530 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 NOVP48745 357 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 ANTXR2P58335 489 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 SNAPC2Q13487 334 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 DGKZQ13574 1117 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 MTMR2Q13614 643 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 ZYXQ15942 572 aaKnown RBP10.09□□□□□ -0.79
NUP88-211ENST00000575976 IQCA1Q86XH1 822 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 JAKMIP1Q96N16 626 aaKnown RBP10.09□□□□□ -0.79
NUP88-211ENST00000575976 ZSCAN10Q96SZ4 725 aaPredicted RBP10.09□□□□□ -0.79
NUP88-211ENST00000575976 FEZ1Q99689 392 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 KIAA1683Q9H0B3 1180 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 ARHGEF10LQ9HCE6 1279 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 NYAP2Q9P242 653 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 TMX2Q9Y320 296 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 MYH8P13535 1937 aa10.09□□□□□ -0.79
NUP88-211ENST00000575976 TNKSO95271 1327 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 THSD7BQ9C0I4 1608 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 GREB1LQ9C091 1923 aaPredicted RBP10.08□□□□□ -0.8
NUP88-211ENST00000575976 CCL15-CCL14A0A0B4J2E2 113 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 A0A0G2JLL6 359 aaPredicted RBP10.08□□□□□ -0.8
NUP88-211ENST00000575976 TESPA1A2RU30 521 aaPredicted RBP10.08□□□□□ -0.8
NUP88-211ENST00000575976 MANSC4A6NHS7 340 aaPredicted RBP10.08□□□□□ -0.8
NUP88-211ENST00000575976 C19orf81C9J6K1 198 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 PRC1O43663 620 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 TTLL1O95922 423 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 CPA1P15085 419 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 MCM5P33992 734 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 GTF2A2P52657 109 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 BACE1P56817 501 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 NOGQ13253 232 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms