RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SLC5A4Q9NY91 659 aa11.02□□□□□ -0.65
SMG6-218ENST00000575454 KBTBD13C9JR72 458 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 IPO8O15397 1037 aaKnown RBP11.01□□□□□ -0.65
SMG6-218ENST00000575454 STRNO43815 780 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 SMAD3P84022 425 aaKnown RBP11.01□□□□□ -0.65
SMG6-218ENST00000575454 OLFML2BQ68BL8 750 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 TATDN1Q6P1N9 297 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 DPP9Q86TI2 863 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 TTC6Q86TZ1 520 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 MAFAQ8NHW3 353 aaPredicted RBP11.01□□□□□ -0.65
SMG6-218ENST00000575454 ZNF512BQ96KM6 892 aaPredicted RBP11.01□□□□□ -0.65
SMG6-218ENST00000575454 KIAA1683Q9H0B3 1180 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 EHD4Q9H223 541 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 SEMA6BQ9H3T3 888 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 CABP5Q9NP86 173 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 HOXC10Q9NYD6 342 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 ATP11BQ9Y2G3 1177 aa11.01□□□□□ -0.65
SMG6-218ENST00000575454 TMEM265A0A087WTH1 108 aa11□□□□□ -0.65
SMG6-218ENST00000575454 CNMDO75829 334 aa11□□□□□ -0.65
SMG6-218ENST00000575454 RAB3GAP1Q15042 981 aa11□□□□□ -0.65
SMG6-218ENST00000575454 POTEEQ6S8J3 1075 aa11□□□□□ -0.65
SMG6-218ENST00000575454 SLC39A5Q6ZMH5 540 aa11□□□□□ -0.65
SMG6-218ENST00000575454 TRMT2AQ8IZ69 625 aaKnown RBP11□□□□□ -0.65
SMG6-218ENST00000575454 FLRT1Q9NZU1 646 aa11□□□□□ -0.65
SMG6-218ENST00000575454 SAP30BPQ9UHR5 308 aaKnown RBP11□□□□□ -0.65
SMG6-218ENST00000575454 SERPINB13Q9UIV8 391 aa11□□□□□ -0.65
SMG6-218ENST00000575454 CDH23Q9H251 3354 aa10.99□□□□□ -0.65
SMG6-218ENST00000575454 DNAH12Q6ZR08 3092 aa10.99□□□□□ -0.65
SMG6-218ENST00000575454 BDP1A6H8Y1 2624 aa10.99□□□□□ -0.65
SMG6-218ENST00000575454 VCAM1P19320 739 aa10.99□□□□□ -0.65
SMG6-218ENST00000575454 CYP2C19P33261 490 aa10.99□□□□□ -0.65
SMG6-218ENST00000575454 ZYXQ15942 572 aaKnown RBP10.99□□□□□ -0.65
SMG6-218ENST00000575454 ABCB5Q2M3G0 1257 aa10.99□□□□□ -0.65
SMG6-218ENST00000575454 CERKLQ49MI3 558 aaPredicted RBP10.99□□□□□ -0.65
SMG6-218ENST00000575454 C1orf53Q5VUE5 145 aa10.99□□□□□ -0.65
SMG6-218ENST00000575454 PRDM6Q9NQX0 595 aa10.99□□□□□ -0.65
SMG6-218ENST00000575454 PRDM5Q9NQX1 630 aaPredicted RBP10.99□□□□□ -0.65
SMG6-218ENST00000575454 SNRKQ9NRH2 765 aa10.99□□□□□ -0.65
SMG6-218ENST00000575454 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
SMG6-218ENST00000575454 ALPK3Q96L96 1907 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 SEPT4O43236 478 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 IGHA2P01877 340 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 CYP2E1P05181 493 aaPredicted RBP10.98□□□□□ -0.65
SMG6-218ENST00000575454 CYBAP13498 195 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 CYP7A1P22680 504 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 USP5P45974 858 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 OS9Q13438 667 aaPredicted RBP10.98□□□□□ -0.65
SMG6-218ENST00000575454 COG2Q14746 738 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 SNX17Q15036 470 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 SHHQ15465 462 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 SHROOM1Q2M3G4 852 aaPredicted RBP10.98□□□□□ -0.65
SMG6-218ENST00000575454 TNNI3KQ59H18 835 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 GJC2Q5T442 439 aaPredicted RBP10.98□□□□□ -0.65
SMG6-218ENST00000575454 ADGRA1Q86SQ6 560 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 ABRAQ8N0Z2 381 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 MB21D1Q8N884 522 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 SHCBP1Q8NEM2 672 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 CDCA7LQ96GN5 454 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 BTBD7Q9P203 1132 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.98□□□□□ -0.65
SMG6-218ENST00000575454 FPGT-TNNI3KV9GXZ4 949 aa10.98□□□□□ -0.65
SMG6-218ENST00000575454 SPDYE16A6NNV3 312 aaPredicted RBP10.97□□□□□ -0.65
SMG6-218ENST00000575454 FOSL2P15408 326 aa10.97□□□□□ -0.65
SMG6-218ENST00000575454 ADORA2AP29274 412 aa10.97□□□□□ -0.65
SMG6-218ENST00000575454 RARSP54136 660 aaKnown RBP10.97□□□□□ -0.65
SMG6-218ENST00000575454 TRPV1Q8NER1 839 aa10.97□□□□□ -0.65
SMG6-218ENST00000575454 NPLOC4Q8TAT6 608 aa10.97□□□□□ -0.65
SMG6-218ENST00000575454 BADQ92934 168 aa10.97□□□□□ -0.65
SMG6-218ENST00000575454 MROH8Q9H579 483 aa10.97□□□□□ -0.65
SMG6-218ENST00000575454 RPAP3Q9H6T3 665 aaPredicted RBP10.97□□□□□ -0.65
SMG6-218ENST00000575454 NRBP1Q9UHY1 535 aa10.97□□□□□ -0.65
SMG6-218ENST00000575454 TACC3Q9Y6A5 838 aa10.97□□□□□ -0.65
SMG6-218ENST00000575454 PNMA6EA0A0J9YXQ4 647 aa10.96□□□□□ -0.65
SMG6-218ENST00000575454 ZNF316A6NFI3 1004 aaPredicted RBP10.96□□□□□ -0.65
SMG6-218ENST00000575454 IDH1O75874 414 aaKnown RBP10.96□□□□□ -0.65
SMG6-218ENST00000575454 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
SMG6-218ENST00000575454 ZAP70P43403 619 aa10.96□□□□□ -0.65
SMG6-218ENST00000575454 DYNLL1P63167 89 aaKnown RBP10.96□□□□□ -0.65
SMG6-218ENST00000575454 MAP3K12Q12852 859 aa10.96□□□□□ -0.65
SMG6-218ENST00000575454 TRIM60Q495X7 471 aa10.96□□□□□ -0.65
SMG6-218ENST00000575454 C9orf50Q5SZB4 431 aa10.96□□□□□ -0.65
SMG6-218ENST00000575454 ACER1Q8TDN7 264 aa10.96□□□□□ -0.65
SMG6-218ENST00000575454 DBNDD2Q9BQY9 259 aa10.96□□□□□ -0.65
SMG6-218ENST00000575454 MOV10L1Q9BXT6 1211 aaKnown RBP10.96□□□□□ -0.65
SMG6-218ENST00000575454 SPATC1LQ9H0A9 340 aa10.96□□□□□ -0.65
SMG6-218ENST00000575454 PDLIM7Q9NR12 457 aa10.96□□□□□ -0.65
SMG6-218ENST00000575454 DOCK1Q14185 1865 aa10.95□□□□□ -0.66
SMG6-218ENST00000575454 ERCC3P19447 782 aa10.95□□□□□ -0.66
SMG6-218ENST00000575454 ADCYAP1R1P41586 468 aa10.95□□□□□ -0.66
SMG6-218ENST00000575454 RNF180Q86T96 592 aa10.95□□□□□ -0.66
SMG6-218ENST00000575454 MYLIPQ8WY64 445 aa10.95□□□□□ -0.66
SMG6-218ENST00000575454 RNPC3Q96LT9 517 aaKnown RBP10.95□□□□□ -0.66
SMG6-218ENST00000575454 TANGO6Q9C0B7 1094 aa10.95□□□□□ -0.66
SMG6-218ENST00000575454 TTYH1Q9H313 450 aaPredicted RBP10.95□□□□□ -0.66
SMG6-218ENST00000575454 PIH1D3Q9NQM4 214 aaKnown RBP10.95□□□□□ -0.66
SMG6-218ENST00000575454 DOCK2Q92608 1830 aa10.95□□□□□ -0.66
SMG6-218ENST00000575454 TRIM43BA6NCK2 446 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 SURF6O75683 361 aaKnown RBP10.94□□□□□ -0.66
SMG6-218ENST00000575454 POLR3DP05423 398 aaPredicted RBP10.94□□□□□ -0.66
SMG6-218ENST00000575454 CLTBP09497 229 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms