RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 RAET1EQ8TD07 263 aa12.71□□□□□ -0.37
LITAF-216ENST00000574848 PXYLP1Q8TE99 480 aa12.71□□□□□ -0.37
LITAF-216ENST00000574848 PUS7LQ9H0K6 701 aaKnown RBP12.71□□□□□ -0.37
LITAF-216ENST00000574848 ROBO3Q96MS0 1386 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 PRKAB2O43741 272 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 ZFYP08048 801 aaPredicted RBP12.7□□□□□ -0.38
LITAF-216ENST00000574848 CYP2D6P10635 497 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 USP14P54578 494 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 HERVK_113P62684 666 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 C12orf60Q5U649 245 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 APPBP2Q92624 585 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 BCL11AQ9H165 835 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 CABP5Q9NP86 173 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 GABRQQ9UN88 632 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 RLFQ13129 1914 aa12.7□□□□□ -0.38
LITAF-216ENST00000574848 PARP14Q460N5 1801 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 DOCK3Q8IZD9 2030 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 FLT3LGP49771 235 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 NUCB1Q02818 461 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 RAB3GAP1Q15042 981 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 TSHZ3Q63HK5 1081 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 LBX2Q6XYB7 198 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 C16orf86Q6ZW13 317 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 COA7Q96BR5 231 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
LITAF-216ENST00000574848 FEZ1Q99689 392 aa12.69□□□□□ -0.38
LITAF-216ENST00000574848 ARPP21Q9UBL0 812 aaPredicted RBP12.69□□□□□ -0.38
LITAF-216ENST00000574848 ZNF236Q9UL36 1845 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 ERC2O15083 957 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 EIF5BO60841 1220 aaKnown RBP12.68□□□□□ -0.38
LITAF-216ENST00000574848 GLRX3O76003 335 aaKnown RBP12.68□□□□□ -0.38
LITAF-216ENST00000574848 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
LITAF-216ENST00000574848 VCAM1P19320 739 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 EN2P19622 333 aaPredicted RBP12.68□□□□□ -0.38
LITAF-216ENST00000574848 MX1P20591 662 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 SEPT2Q15019 361 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 PRPF38BQ5VTL8 546 aaKnown RBP12.68□□□□□ -0.38
LITAF-216ENST00000574848 POTEEQ6S8J3 1075 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 AMOTL1Q8IY63 956 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 SLC44A5Q8NCS7 719 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 ACER1Q8TDN7 264 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 OTUD7AQ8TE49 926 aaPredicted RBP12.68□□□□□ -0.38
LITAF-216ENST00000574848 OSBP2Q969R2 916 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 SHISA4Q96DD7 197 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 DDRGK1Q96HY6 314 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 P2RX7Q99572 595 aaKnown RBP12.68□□□□□ -0.38
LITAF-216ENST00000574848 TXNRD2Q9NNW7 524 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 SLC4A4Q9Y6R1 1079 aa12.68□□□□□ -0.38
LITAF-216ENST00000574848 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L15C9J2P7 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L13C9JLJ4 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L12C9JPN9 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L11C9JVI0 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L21D6R901 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L18D6R9N7 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L22D6RA61 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L17D6RBQ6 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L19D6RCP7 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L20D6RJB6 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 RNF113AO15541 343 aaKnown RBP12.67□□□□□ -0.38
LITAF-216ENST00000574848 ADCY3O60266 1144 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 ERVK-9P63128 1117 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 ERVK-24P63145 666 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 UBXN2AP68543 259 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 USP17L24Q0WX57 530 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 MTFR1Q15390 333 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
LITAF-216ENST00000574848 SBK1Q52WX2 424 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 CTR9Q6PD62 1173 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 CATSPERGQ6ZRH7 1159 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 CHD1LQ86WJ1 897 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 DYNLL2Q96FJ2 89 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 CCDC17Q96LX7 622 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 UPF2Q9HAU5 1272 aaKnown RBP12.67□□□□□ -0.38
LITAF-216ENST00000574848 RBPJLQ9UBG7 517 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 GJD2Q9UKL4 321 aa12.67□□□□□ -0.38
LITAF-216ENST00000574848 CYP2D7A0A087X1C5 515 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 SMIM22K7EJ46 135 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 GPAA1O43292 621 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 GJB1P08034 283 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 CCL5P13501 91 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 AKR1B1P15121 316 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 CAPN2P17655 700 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 GNAT2P19087 354 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 MAPK4P31152 587 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 GJA8P48165 433 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 CDK8P49336 464 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 ZYXQ15942 572 aaKnown RBP12.66□□□□□ -0.38
LITAF-216ENST00000574848 GPRC5AQ8NFJ5 357 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 SOCS4Q8WXH5 440 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 LPAR1Q92633 364 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 EPB41L4AQ9HCS5 686 aaPredicted RBP12.66□□□□□ -0.38
LITAF-216ENST00000574848 STAP2Q9UGK3 403 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 RABGAP1Q9Y3P9 1069 aa12.66□□□□□ -0.38
LITAF-216ENST00000574848 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms