RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 ANKRD20A4Q4UJ75 823 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 ANKRD20A8PQ5CZ79 823 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 ANKRD20A2Q5SQ80 823 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 ANKRD20A1Q5TYW2 823 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 THUMPD2Q9BTF0 503 aaKnown RBP11.04□□□□□ -0.64
USP6-205ENST00000574788 SP4Q02446 784 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 ARHGEF6Q15052 776 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 KRT71Q3SY84 523 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 EFCAB13Q8IY85 973 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.04□□□□□ -0.64
USP6-205ENST00000574788 IFNA8P32881 189 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 GABPB1Q06547 395 aaPredicted RBP11.04□□□□□ -0.64
USP6-205ENST00000574788 LETM2Q2VYF4 491 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 SYT10Q6XYQ8 523 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 HELLSQ9NRZ9 838 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 IQGAP2Q13576 1575 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 KPNA2P52292 529 aaKnown RBP11.04□□□□□ -0.64
USP6-205ENST00000574788 CALCRLQ16602 461 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 PPP1R2P3Q6NXS1 205 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.04□□□□□ -0.64
USP6-205ENST00000574788 SCAF11Q99590 1463 aaKnown RBP11.04□□□□□ -0.64
USP6-205ENST00000574788 SFMBT2Q5VUG0 894 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 RPS6KC1Q96S38 1066 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 TEX12Q9BXU0 123 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 PPP1R9AQ9ULJ8 1098 aa11.04□□□□□ -0.64
USP6-205ENST00000574788 NXNQ6DKJ4 435 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 ARMC9Q7Z3E5 817 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 SPDL1Q96EA4 605 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 FAF1Q9UNN5 650 aaPredicted RBP11.03□□□□□ -0.64
USP6-205ENST00000574788 ASXL1Q8IXJ9 1541 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 GCNT3O95395 438 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 RAP1GDS1P52306 607 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 XRCC5P13010 732 aaKnown RBP11.03□□□□□ -0.64
USP6-205ENST00000574788 DDX41Q9UJV9 622 aaKnown RBP11.03□□□□□ -0.64
USP6-205ENST00000574788 IFT140Q96RY7 1462 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 ARHGEF37A1IGU5 675 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 HNRNPCL2B2RXH8 293 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 HNRNPCL1O60812 293 aaKnown RBP11.03□□□□□ -0.64
USP6-205ENST00000574788 KRT28Q7Z3Y7 464 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 NECAB1Q8N987 351 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 SKA2Q8WVK7 121 aaPredicted RBP11.03□□□□□ -0.64
USP6-205ENST00000574788 STX17P56962 302 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
USP6-205ENST00000574788 IFIH1Q9BYX4 1025 aaKnown RBP11.03□□□□□ -0.64
USP6-205ENST00000574788 NSFL1CQ9UNZ2 370 aaKnown RBP11.03□□□□□ -0.64
USP6-205ENST00000574788 EFCAB14O75071 495 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 GNPTABQ3T906 1256 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 FAM81BQ96LP2 452 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 EFCC1Q9HA90 598 aa11.03□□□□□ -0.64
USP6-205ENST00000574788 TOM1O60784 492 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 HEXIM1O94992 359 aaKnown RBP11.02□□□□□ -0.64
USP6-205ENST00000574788 CD19P15391 556 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 STAT1P42224 750 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 CCDC51Q96ER9 411 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 ADPGKQ9BRR6 497 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 EXOC3O60645 756 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 CUTAO60888 179 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 PTPREP23469 700 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 KRT25Q7Z3Z0 450 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 CLSTN2Q9H4D0 955 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 SLC13A4Q9UKG4 626 aa11.02□□□□□ -0.64
USP6-205ENST00000574788 ZBED4O75132 1171 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 STAM2O75886 525 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 APOEP02649 317 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 MAP3K7CLP57077 242 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 ELMSAN1Q6PJG2 1045 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 CTAGE3PQ8IX95 158 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 SPZ1Q9BXG8 430 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 KCNH3Q9ULD8 1083 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 ANGEL1Q9UNK9 670 aaKnown RBP11.02□□□□□ -0.65
USP6-205ENST00000574788 MX2P20592 715 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 DDX21Q9NR30 783 aaKnown RBP eCLIP11.02□□□□□ -0.65
USP6-205ENST00000574788 SLC1A4P43007 532 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 EIF6P56537 245 aaKnown RBP11.02□□□□□ -0.65
USP6-205ENST00000574788 KLHL30Q0D2K2 578 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 TNFAIP1Q13829 316 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 GINS2Q9Y248 185 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 MAP2K2P36507 400 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 YARSP54577 528 aaKnown RBP11.02□□□□□ -0.65
USP6-205ENST00000574788 TCIRG1Q13488 830 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 PDXDC1Q6P996 788 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 SRRM1Q8IYB3 904 aaKnown RBP11.02□□□□□ -0.65
USP6-205ENST00000574788 TEX11Q8IYF3 940 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 RASEFQ8IZ41 740 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 DONSONQ9NYP3 566 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 PCDHB13Q9Y5F0 798 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 TMEM247A6NEH6 219 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 TMOD1P28289 359 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 MICAL1Q8TDZ2 1067 aa11.02□□□□□ -0.65
USP6-205ENST00000574788 TNNI1P19237 187 aa11.01□□□□□ -0.65
USP6-205ENST00000574788 RSBN1LQ6PCB5 846 aaPredicted RBP11.01□□□□□ -0.65
USP6-205ENST00000574788 MYCT1Q8N699 235 aa11.01□□□□□ -0.65
USP6-205ENST00000574788 VPS37BQ9H9H4 285 aa11.01□□□□□ -0.65
USP6-205ENST00000574788 CHPF2Q9P2E5 772 aa11.01□□□□□ -0.65
USP6-205ENST00000574788 TTI1O43156 1089 aa11.01□□□□□ -0.65
USP6-205ENST00000574788 XPAP23025 273 aaPredicted RBP11.01□□□□□ -0.65
USP6-205ENST00000574788 USHBP1Q8N6Y0 703 aa11.01□□□□□ -0.65
USP6-205ENST00000574788 LINS1Q8NG48 757 aa11.01□□□□□ -0.65
USP6-205ENST00000574788 STAG1Q8WVM7 1258 aa11.01□□□□□ -0.65
USP6-205ENST00000574788 MICAL3Q7RTP6 2002 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms