RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 COL2A1P02458 1487 aaPredicted RBP11.29□□□□□ -0.6
NDE1-208ENST00000573694 SMIM22K7EJ46 135 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 IGF2BP3O00425 579 aaKnown RBP eCLIP11.28□□□□□ -0.6
NDE1-208ENST00000573694 TLR2O60603 784 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 BAG3O95817 575 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 PPP4CP60510 307 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 APOBRQ0VD83 1088 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 STK3Q13188 491 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 KIF22Q14807 665 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 ANKRD1Q15327 319 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 DIXDC1Q155Q3 683 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
NDE1-208ENST00000573694 ANKRD23Q86SG2 305 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 NBPF11Q86T75 865 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 BRF1Q92994 677 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 ELP3Q9H9T3 547 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 INCENPQ9NQS7 918 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 AATFQ9NY61 560 aaKnown RBP eCLIP11.28□□□□□ -0.6
NDE1-208ENST00000573694 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 ZDHHC9Q9Y397 364 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 MYH8P13535 1937 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 ATRNL1Q5VV63 1379 aa11.28□□□□□ -0.6
NDE1-208ENST00000573694 CCL15-CCL14A0A0B4J2E2 113 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 PRC1O43663 620 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 HMGB1P09429 215 aaKnown RBP11.27□□□□□ -0.61
NDE1-208ENST00000573694 HOXD10P28358 340 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 GJA5P36382 358 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 CCL15Q16663 113 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 FOXD4L5Q5VV16 416 aaPredicted RBP11.27□□□□□ -0.61
NDE1-208ENST00000573694 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 RALYLQ86SE5 291 aaKnown RBP11.27□□□□□ -0.61
NDE1-208ENST00000573694 NCOA7Q8NI08 942 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 FOXD4L4Q8WXT5 416 aaPredicted RBP11.27□□□□□ -0.61
NDE1-208ENST00000573694 BRI3BPQ8WY22 251 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 ARMC5Q96C12 935 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 PTPN18Q99952 460 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 NOL10Q9BSC4 688 aaKnown RBP11.27□□□□□ -0.61
NDE1-208ENST00000573694 AGXT2Q9BYV1 514 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 EFCC1Q9HA90 598 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 FAM198AQ9UFP1 575 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 HERC5Q9UII4 1024 aaKnown RBP11.27□□□□□ -0.61
NDE1-208ENST00000573694 SNCAIPQ9Y6H5 919 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 MROH7-TTC4A0A0A0MT08 1334 aa11.27□□□□□ -0.61
NDE1-208ENST00000573694 KIAA0100Q14667 2235 aaKnown RBP11.26□□□□□ -0.61
NDE1-208ENST00000573694 CYP2D7A0A087X1C5 515 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 B4E1Z4 1266 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 IRF6O14896 467 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 FGD1P98174 961 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 EVX2Q03828 476 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 CRHR2Q13324 411 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 TAF1CQ15572 869 aaPredicted RBP11.26□□□□□ -0.61
NDE1-208ENST00000573694 OTOP1Q7RTM1 612 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 STK11IPQ8N1F8 1099 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 NACAP1Q9BZK3 213 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 OSBPL5Q9H0X9 879 aaPredicted RBP11.26□□□□□ -0.61
NDE1-208ENST00000573694 PICK1Q9NRD5 415 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 SMC3Q9UQE7 1217 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 PTPN22Q9Y2R2 807 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 MYH6P13533 1939 aa11.26□□□□□ -0.61
NDE1-208ENST00000573694 PHF20L1A8MW92 1017 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 CYP2D6P10635 497 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 GJB2P29033 226 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 MCM4P33991 863 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 NUCB2P80303 420 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 PPARAQ07869 468 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 METTL16Q86W50 562 aaKnown RBP11.25□□□□□ -0.61
NDE1-208ENST00000573694 FOXP4Q8IVH2 680 aaPredicted RBP11.25□□□□□ -0.61
NDE1-208ENST00000573694 SCYL3Q8IZE3 742 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
NDE1-208ENST00000573694 STAG1Q8WVM7 1258 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 GTF3C6Q969F1 213 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 OTUD5Q96G74 571 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 CHAMP1Q96JM3 812 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 CRNKL1Q9BZJ0 848 aaKnown RBP11.25□□□□□ -0.61
NDE1-208ENST00000573694 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
NDE1-208ENST00000573694 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.25□□□□□ -0.61
NDE1-208ENST00000573694 SIPA1L1O43166 1804 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 JAK2O60674 1132 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 BRD1O95696 1058 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 MCM5P33992 734 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 SCRN1Q12765 414 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
NDE1-208ENST00000573694 RRP12Q5JTH9 1297 aaKnown RBP11.24□□□□□ -0.61
NDE1-208ENST00000573694 AKNAD1Q5T1N1 836 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 RAB11FIP4Q86YS3 637 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 PARK7Q99497 189 aaKnown RBP11.24□□□□□ -0.61
NDE1-208ENST00000573694 DCP1AQ9NPI6 582 aaPredicted RBP11.24□□□□□ -0.61
NDE1-208ENST00000573694 BRPF3Q9ULD4 1205 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 NAP1L2Q9ULW6 460 aaPredicted RBP11.24□□□□□ -0.61
NDE1-208ENST00000573694 TRIM17Q9Y577 477 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 WDR19Q8NEZ3 1342 aa11.24□□□□□ -0.61
NDE1-208ENST00000573694 KLF18A0A0U1RQI7 1052 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 BTBD19C9JJ37 291 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 SH2B2O14492 632 aaPredicted RBP11.23□□□□□ -0.61
NDE1-208ENST00000573694 PFKFB2O60825 505 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 KDM4AO75164 1064 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 BTDP43251 543 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 RHBDL3P58872 404 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 CCT2P78371 535 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms