RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 ZNF70Q9UC06 446 aaPredicted RBP14.94□□□□□ -0.02
PRPF8-207ENST00000573681 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
PRPF8-207ENST00000573681 PCDHAC2Q9Y5I4 1007 aa14.94□□□□□ -0.02
PRPF8-207ENST00000573681 ELP1O95163 1332 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 MYO1BO43795 1136 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 PPFIA3O75145 1194 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 SMARCA1P28370 1054 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 SHMT1P34896 483 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 UBE2HP62256 183 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 GUCY1B3Q02153 619 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 FUT2Q10981 343 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 TCP10Q12799 353 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 GRM4Q14833 912 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 SAFBQ15424 915 aaKnown RBP eCLIP14.93□□□□□ -0.02
PRPF8-207ENST00000573681 KRT40Q6A162 431 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 FAM151AQ8WW52 585 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 DPF2Q92785 391 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 CHAMP1Q96JM3 812 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 TRIM34Q9BYJ4 488 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 MTMR4Q9NYA4 1195 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 STX8Q9UNK0 236 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 V9GY48 417 aaPredicted RBP14.93□□□□□ -0.02
PRPF8-207ENST00000573681 PLIN4Q96Q06 1357 aa14.93□□□□□ -0.02
PRPF8-207ENST00000573681 BAZ2AQ9UIF9 1905 aaKnown RBP14.93□□□□□ -0.02
PRPF8-207ENST00000573681 IGKV6D-41A0A0C4DH26 115 aa14.92□□□□□ -0.02
PRPF8-207ENST00000573681 DDTLA6NHG4 134 aaPredicted RBP14.92□□□□□ -0.02
PRPF8-207ENST00000573681 FZD9O00144 591 aa14.92□□□□□ -0.02
PRPF8-207ENST00000573681 FOSBP53539 338 aa14.92□□□□□ -0.02
PRPF8-207ENST00000573681 ZNF280AP59817 542 aaPredicted RBP14.92□□□□□ -0.02
PRPF8-207ENST00000573681 SPDYE2Q495Y8 402 aa14.92□□□□□ -0.02
PRPF8-207ENST00000573681 NLGN2Q8NFZ4 835 aa14.92□□□□□ -0.02
PRPF8-207ENST00000573681 ZBED3Q96IU2 234 aaPredicted RBP14.92□□□□□ -0.02
PRPF8-207ENST00000573681 TFIP11Q9UBB9 837 aaKnown RBP14.92□□□□□ -0.02
PRPF8-207ENST00000573681 RCOR1Q9UKL0 485 aa14.92□□□□□ -0.02
PRPF8-207ENST00000573681 COL2A1P02458 1487 aaPredicted RBP14.91□□□□□ -0.02
PRPF8-207ENST00000573681 ATRNL1Q5VV63 1379 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 PALM3A6NDB9 673 aaPredicted RBP14.91□□□□□ -0.02
PRPF8-207ENST00000573681 AKR1B1P15121 316 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 CACNB3P54284 484 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 OTUD7BQ6GQQ9 843 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 TATDN1Q6P1N9 297 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 SH3BP5LQ7L8J4 393 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 FAM83AQ86UY5 434 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 CCDC82Q8N4S0 544 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 SRBD1Q8N5C6 995 aaKnown RBP14.91□□□□□ -0.02
PRPF8-207ENST00000573681 CEP95Q96GE4 821 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 SPATA32Q96LK8 384 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.91□□□□□ -0.02
PRPF8-207ENST00000573681 GDPD2Q9HCC8 539 aa14.91□□□□□ -0.02
PRPF8-207ENST00000573681 HERC5Q9UII4 1024 aaKnown RBP14.91□□□□□ -0.02
PRPF8-207ENST00000573681 LAMB1P07942 1786 aa14.9□□□□□ -0.02
PRPF8-207ENST00000573681 FIBPO43427 364 aa14.9□□□□□ -0.02
PRPF8-207ENST00000573681 PLEKHA8P1O95397 391 aa14.9□□□□□ -0.02
PRPF8-207ENST00000573681 TTLL1O95922 423 aa14.9□□□□□ -0.02
PRPF8-207ENST00000573681 U2AF2P26368 475 aaKnown RBP eCLIP14.9□□□□□ -0.023e-13■■■■■ 41.3
PRPF8-207ENST00000573681 KIF23Q02241 960 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-207ENST00000573681 GNL2Q13823 731 aaKnown RBP14.9□□□□□ -0.02
PRPF8-207ENST00000573681 CERKLQ49MI3 558 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-207ENST00000573681 FAM173BQ6P4H8 233 aa14.9□□□□□ -0.02
PRPF8-207ENST00000573681 FAM177A1Q8N128 213 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-207ENST00000573681 GPT2Q8TD30 523 aa14.9□□□□□ -0.02
PRPF8-207ENST00000573681 LEO1Q8WVC0 666 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-207ENST00000573681 SYAP1Q96A49 352 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-207ENST00000573681 AIFM3Q96NN9 605 aa14.9□□□□□ -0.02
PRPF8-207ENST00000573681 KANSL2Q9H9L4 492 aa14.9□□□□□ -0.02
PRPF8-207ENST00000573681 NAV1Q8NEY1 1877 aa14.9□□□□□ -0.02
PRPF8-207ENST00000573681 SCN9AQ15858 1988 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 GOLGA6L4A6NEF3 574 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 TBC1D12O60347 775 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 MMP1P03956 469 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 PARP1P09874 1014 aaKnown RBP14.89□□□□□ -0.03
PRPF8-207ENST00000573681 GUCY1A2P33402 732 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 TNNI2P48788 182 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 PKN1Q16512 942 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 ARHGAP27Q6ZUM4 889 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 CMTR1Q8N1G2 835 aaKnown RBP14.89□□□□□ -0.03
PRPF8-207ENST00000573681 MKL1Q969V6 931 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 FOXP1Q9H334 677 aaPredicted RBP14.89□□□□□ -0.03
PRPF8-207ENST00000573681 MYOZ2Q9NPC6 264 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 RTEL1Q9NZ71 1219 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 CLIP2Q9UDT6 1046 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 MAD2L2Q9UI95 211 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 COL4A5P29400 1685 aa14.89□□□□□ -0.03
PRPF8-207ENST00000573681 TCP10L2B9ZVM9 353 aa14.88□□□□□ -0.03
PRPF8-207ENST00000573681 MPHOSPH10O00566 681 aaKnown RBP14.88□□□□□ -0.03
PRPF8-207ENST00000573681 GADD45BO75293 160 aaPredicted RBP14.88□□□□□ -0.03
PRPF8-207ENST00000573681 PFKFB3Q16875 520 aaPredicted RBP14.88□□□□□ -0.03
PRPF8-207ENST00000573681 TMEM179Q6ZVK1 233 aa14.88□□□□□ -0.03
PRPF8-207ENST00000573681 CSRNP1Q96S65 589 aa14.88□□□□□ -0.03
PRPF8-207ENST00000573681 GZF1Q9H116 711 aaPredicted RBP14.88□□□□□ -0.03
PRPF8-207ENST00000573681 CABP5Q9NP86 173 aa14.88□□□□□ -0.03
PRPF8-207ENST00000573681 SH3GLB2Q9NR46 395 aa14.88□□□□□ -0.03
PRPF8-207ENST00000573681 NYAP2Q9P242 653 aa14.88□□□□□ -0.03
PRPF8-207ENST00000573681 CLRN2A0PK11 232 aa14.87□□□□□ -0.03
PRPF8-207ENST00000573681 KLRF2D3W0D1 207 aa14.87□□□□□ -0.03
PRPF8-207ENST00000573681 LETM1O95202 739 aaPredicted RBP14.87□□□□□ -0.03
PRPF8-207ENST00000573681 SCG2P13521 617 aa14.87□□□□□ -0.03
PRPF8-207ENST00000573681 LMNB1P20700 586 aa14.87□□□□□ -0.03
PRPF8-207ENST00000573681 RASSF7Q02833 373 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms