RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 ZSCAN26Q16670 478 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 GPT2Q8TD30 523 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 CABS1Q96KC9 395 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 CDC23Q9UJX2 597 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 ANAPC4Q9UJX5 808 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 PPP2R2CQ9Y2T4 447 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 ITGA6P23229 1130 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 EEF1GP26641 437 aaKnown RBP13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 SLC8A1P32418 973 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 BBOF1Q8ND07 529 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 P3H4Q92791 437 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 VPS16Q9H269 839 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 HOMER3Q9NSC5 361 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 MED23Q9ULK4 1368 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 SEMA3EO15041 775 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 ATP6V1AP38606 617 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 ZNF174Q15697 407 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 WDR44Q5JSH3 913 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 UBLCP1Q8WVY7 318 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 NELFBQ8WX92 580 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 AK8Q96MA6 479 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 CFAP57Q96MR6 1250 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 STMN2Q93045 179 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 LRWD1Q9UFC0 647 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 ATP8A2Q9NTI2 1148 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 ADCY9O60503 1353 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 TMEM2Q9UHN6 1383 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 CCT6AP40227 531 aaKnown RBP13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 NCBP1Q09161 790 aaKnown RBP13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 IPO4Q8TEX9 1081 aaKnown RBP13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 ZKSCAN3Q9BRR0 538 aa13.76□□□□□ -0.21
PCDHGA9-201ENST00000573521 GAS8O95995 478 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 MXRA7P84157 204 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 SRGAP1Q7Z6B7 1085 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 VCXQ9H320 206 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 HIBADHP31937 336 aaKnown RBP13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 ZNF365Q70YC5 407 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 CEP57Q86XR8 500 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 CALR3Q96L12 384 aaKnown RBP13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 FAM81BQ96LP2 452 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 IFIH1Q9BYX4 1025 aaKnown RBP13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 TXNDC16Q9P2K2 825 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 IGSF3O75054 1194 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 MAN1A1P33908 653 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 DDB1Q16531 1140 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 V9GY48 417 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 H0YCG3 227 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 FBLN1P23142 703 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 ADCY7P51828 1080 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 INF2Q27J81 1249 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 CCDC38Q502W7 563 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 OGFOD1Q8N543 542 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 SLC17A8Q8NDX2 589 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 GRK7Q8WTQ7 553 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 EXOC4Q96A65 974 aa13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 ZC3H12CQ9C0D7 883 aaKnown RBP13.75□□□□□ -0.21
PCDHGA9-201ENST00000573521 SOS2Q07890 1332 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 WDR19Q8NEZ3 1342 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 MED14O60244 1454 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 HMGB1P1B2RPK0 211 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 RNF40O75150 1001 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 KLHL30Q0D2K2 578 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 TCIRG1Q13488 830 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 MTX1Q13505 466 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 MAP3K21Q5TCX8 1036 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 HSPA6P17066 643 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 KCNA6P17658 529 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 RCAN1P53805 252 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 DMTNQ08495 405 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 LETM2Q2VYF4 491 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 HSP90AA4PQ58FG1 418 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 FNBP4Q8N3X1 1017 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 USP28Q96RU2 1077 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 RNF26Q9BY78 433 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 DNM3Q9UQ16 869 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 SPOPO43791 374 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 C10orf76Q5T2E6 689 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 CABP7Q86V35 215 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 CNPY4Q8N129 248 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 SPATA5Q8NB90 893 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 HOOK2Q96ED9 719 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 DHTKD1Q96HY7 919 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 ALDH8A1Q9H2A2 487 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 TYW1Q9NV66 732 aaKnown RBP13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 IGSF1Q8N6C5 1336 aa13.74□□□□□ -0.21
PCDHGA9-201ENST00000573521 PABPN1LA6NDY0 278 aaKnown RBP13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 PCCAP05165 728 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 CPA1P15085 419 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 TIMM10P62072 90 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 PIK3AP1Q6ZUJ8 805 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 PHLDB2Q86SQ0 1253 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 SPTLC3Q9NUV7 552 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 ATP10DQ9P241 1426 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 CROCC2H7BZ55 1655 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 SEPT2Q15019 361 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms