RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 GTF3C2Q8WUA4 911 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 UNC93B1Q9H1C4 597 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 DCTPP1Q9H773 170 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 EMILIN3Q9NT22 766 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 A0A0G2JMZ2 1700 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 FRMPD3Q5JV73 1810 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L15C9J2P7 530 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L13C9JLJ4 530 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L11C9JVI0 530 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L18D6R9N7 530 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L22D6RA61 530 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L17D6RBQ6 530 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L19D6RCP7 530 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L20D6RJB6 530 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 PEX10O60683 326 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 CHGBP05060 677 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 GJB1P08034 283 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 VCAM1P19320 739 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 ERVK-9P63128 1117 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 ERVK-24P63145 666 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 GABPAQ06546 454 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L24Q0WX57 530 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 WDR78Q5VTH9 848 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 SLC44A5Q8NCS7 719 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 ACER1Q8TDN7 264 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 SHISA4Q96DD7 197 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 DYNLL2Q96FJ2 89 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 C12orf42Q96LP6 360 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 KIAA1683Q9H0B3 1180 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 MORF4L1Q9UBU8 362 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 SWAP70Q9UH65 585 aa11.61□□□□□ -0.55
NPLOC4-212ENST00000573328 HMGCRP04035 888 aa11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 CYP2B6P20813 491 aa11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 MAPK4P31152 587 aa11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 GJA8P48165 433 aa11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 TMEM179Q6ZVK1 233 aa11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 U2AF1L4Q8WU68 220 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 NUDT12Q9BQG2 462 aa11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 PUS7LQ9H0K6 701 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 RPAP3Q9H6T3 665 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 TXNRD2Q9NNW7 524 aa11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 RLFQ13129 1914 aa11.6□□□□□ -0.55
NPLOC4-212ENST00000573328 ALPK3Q96L96 1907 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 GREB1LQ9C091 1923 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 ZNFX1Q9P2E3 1918 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 CYP2D7A0A087X1C5 515 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L12C9JPN9 530 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 USP17L21D6R901 530 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 ERC2O15083 957 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 FARP2O94887 1054 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 GUCY1A2P33402 732 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 CCNA1P78396 465 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 ATP2B2Q01814 1243 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 ICA1Q05084 483 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 KBTBD3Q8NAB2 608 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 SOCS4Q8WXH5 440 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 GCC1Q96CN9 775 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 DEFB118Q96PH6 123 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 TANGO6Q9C0B7 1094 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 SH2D4AQ9H788 454 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 ARHGEF10LQ9HCE6 1279 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 PCDHB15Q9Y5E8 787 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 CEP290O15078 2479 aa11.59□□□□□ -0.55
NPLOC4-212ENST00000573328 PLXNA1Q9UIW2 1896 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 RAD21O60216 631 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 TFRCP02786 760 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 AKR1B1P15121 316 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 CDK8P49336 464 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 LRRFIP1Q32MZ4 808 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 C12orf60Q5U649 245 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 SAMD1Q6SPF0 538 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 CATSPERGQ6ZRH7 1159 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 GPR142Q7Z601 462 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 CLEC10AQ8IUN9 316 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 STK11IPQ8N1F8 1099 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 APPBP2Q92624 585 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 DPF3Q92784 378 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 CRBNQ96SW2 442 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 HTATIP2Q9BUP3 242 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 PORCNQ9H237 461 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 RBPJLQ9UBG7 517 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 ARPP21Q9UBL0 812 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 RABGAP1Q9Y3P9 1069 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 IVNS1ABPQ9Y6Y0 642 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 TTC41PQ6P2S7 1318 aa11.58□□□□□ -0.56
NPLOC4-212ENST00000573328 RNF113AO15541 343 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 SGPL1O95470 568 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 ZFYP08048 801 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 ZKSCAN1P17029 563 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 RGS2P41220 211 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 TDO2P48775 406 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 Q3C1V9 767 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 C16orf86Q6ZW13 317 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms