RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 CCND3P30281 292 aaPredicted RBP13.41□□□□□ -0.26
ABR-220ENST00000573325 TMED8Q6PL24 325 aaPredicted RBP13.41□□□□□ -0.26
ABR-220ENST00000573325 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
ABR-220ENST00000573325 HMX1Q9NP08 348 aaPredicted RBP13.41□□□□□ -0.26
ABR-220ENST00000573325 SERPINB13Q9UIV8 391 aa13.41□□□□□ -0.26
ABR-220ENST00000573325 RABGAP1Q9Y3P9 1069 aa13.41□□□□□ -0.26
ABR-220ENST00000573325 IDH1O75874 414 aaKnown RBP13.4□□□□□ -0.26
ABR-220ENST00000573325 CHGBP05060 677 aa13.4□□□□□ -0.26
ABR-220ENST00000573325 VCAM1P19320 739 aa13.4□□□□□ -0.26
ABR-220ENST00000573325 MAPK4P31152 587 aa13.4□□□□□ -0.26
ABR-220ENST00000573325 IRX3P78415 501 aaPredicted RBP13.4□□□□□ -0.26
ABR-220ENST00000573325 SLFNL1Q499Z3 407 aa13.4□□□□□ -0.26
ABR-220ENST00000573325 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
ABR-220ENST00000573325 SOCS4Q8WXH5 440 aa13.4□□□□□ -0.26
ABR-220ENST00000573325 NUDT12Q9BQG2 462 aa13.4□□□□□ -0.26
ABR-220ENST00000573325 NBPF3Q9H094 633 aa13.4□□□□□ -0.26
ABR-220ENST00000573325 ZBTB40Q9NUA8 1239 aa13.4□□□□□ -0.26
ABR-220ENST00000573325 CDH23Q9H251 3354 aa13.4□□□□□ -0.26
ABR-220ENST00000573325 SPDYE16A6NNV3 312 aaPredicted RBP13.39□□□□□ -0.27
ABR-220ENST00000573325 PDE6AP16499 860 aa13.39□□□□□ -0.27
ABR-220ENST00000573325 GRB14Q14449 540 aa13.39□□□□□ -0.27
ABR-220ENST00000573325 PLEKHH3Q7Z736 793 aa13.39□□□□□ -0.27
ABR-220ENST00000573325 ITPRIPQ8IWB1 547 aa13.39□□□□□ -0.27
ABR-220ENST00000573325 NPLOC4Q8TAT6 608 aa13.39□□□□□ -0.27
ABR-220ENST00000573325 RHPN1Q8TCX5 695 aa13.39□□□□□ -0.27
ABR-220ENST00000573325 EDC3Q96F86 508 aaKnown RBP13.39□□□□□ -0.27
ABR-220ENST00000573325 TMOD4Q9NZQ9 345 aa13.39□□□□□ -0.27
ABR-220ENST00000573325 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
ABR-220ENST00000573325 MYH1P12882 1939 aa13.39□□□□□ -0.27
ABR-220ENST00000573325 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 CYP2D6P10635 497 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 PTPREP23469 700 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 MAP2K5Q13163 448 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 LRRC26Q2I0M4 334 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 AACSQ86V21 672 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 CERS3Q8IU89 383 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 CRACR2BQ8N4Y2 399 aaPredicted RBP13.38□□□□□ -0.27
ABR-220ENST00000573325 SLC44A5Q8NCS7 719 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.38□□□□□ -0.27
ABR-220ENST00000573325 APBA2Q99767 749 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 IL1RAPL2Q9NP60 686 aa13.38□□□□□ -0.27
ABR-220ENST00000573325 DCP1AQ9NPI6 582 aaPredicted RBP13.38□□□□□ -0.27
ABR-220ENST00000573325 ZMYND8Q9ULU4 1186 aaPredicted RBP13.38□□□□□ -0.27
ABR-220ENST00000573325 A0A0G2JMZ2 1700 aa13.37□□□□□ -0.27
ABR-220ENST00000573325 HLA-DOAP06340 250 aa13.37□□□□□ -0.27
ABR-220ENST00000573325 MAGEA10P43363 369 aaPredicted RBP13.37□□□□□ -0.27
ABR-220ENST00000573325 OS9Q13438 667 aaPredicted RBP13.37□□□□□ -0.27
ABR-220ENST00000573325 SEPT2Q15019 361 aa13.37□□□□□ -0.27
ABR-220ENST00000573325 LRIT3Q3SXY7 679 aa13.37□□□□□ -0.27
ABR-220ENST00000573325 CERKLQ49MI3 558 aaPredicted RBP13.37□□□□□ -0.27
ABR-220ENST00000573325 C7orf61Q8IZ16 206 aa13.37□□□□□ -0.27
ABR-220ENST00000573325 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
ABR-220ENST00000573325 NOL10Q9BSC4 688 aaKnown RBP13.37□□□□□ -0.27
ABR-220ENST00000573325 C11orf49Q9H6J7 331 aa13.37□□□□□ -0.27
ABR-220ENST00000573325 SPTBN5Q9NRC6 3674 aaKnown RBP13.36□□□□□ -0.27
ABR-220ENST00000573325 SLC15A5A6NIM6 579 aa13.36□□□□□ -0.27
ABR-220ENST00000573325 HNRNPUQ00839 825 aaKnown RBP eCLIP13.36□□□□□ -0.27
ABR-220ENST00000573325 MAP3K12Q12852 859 aa13.36□□□□□ -0.27
ABR-220ENST00000573325 ABCB5Q2M3G0 1257 aa13.36□□□□□ -0.27
ABR-220ENST00000573325 GPR153Q6NV75 609 aa13.36□□□□□ -0.27
ABR-220ENST00000573325 TRMT44Q8IYL2 757 aaKnown RBP13.36□□□□□ -0.27
ABR-220ENST00000573325 LCORLQ8N3X6 602 aa13.36□□□□□ -0.27
ABR-220ENST00000573325 PAGR1Q9BTK6 254 aa13.36□□□□□ -0.27
ABR-220ENST00000573325 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.36□□□□□ -0.27
ABR-220ENST00000573325 ADAMTS5Q9UNA0 930 aa13.36□□□□□ -0.27
ABR-220ENST00000573325 ZBED9Q6R2W3 1325 aa13.36□□□□□ -0.27
ABR-220ENST00000573325 ZNF532Q9HCE3 1301 aa13.36□□□□□ -0.27
ABR-220ENST00000573325 PRKAB2O43741 272 aa13.35□□□□□ -0.27
ABR-220ENST00000573325 COBLO75128 1261 aa13.35□□□□□ -0.27
ABR-220ENST00000573325 CYBAP13498 195 aa13.35□□□□□ -0.27
ABR-220ENST00000573325 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
ABR-220ENST00000573325 SYN1P17600 705 aa13.35□□□□□ -0.27
ABR-220ENST00000573325 RGS2P41220 211 aa13.35□□□□□ -0.27
ABR-220ENST00000573325 ZYXQ15942 572 aaKnown RBP13.35□□□□□ -0.27
ABR-220ENST00000573325 SLC9C2Q5TAH2 1124 aa13.35□□□□□ -0.27
ABR-220ENST00000573325 TTC6Q86TZ1 520 aa13.35□□□□□ -0.27
ABR-220ENST00000573325 SDR42E1Q8WUS8 393 aa13.35□□□□□ -0.27
ABR-220ENST00000573325 MOV10L1Q9BXT6 1211 aaKnown RBP13.35□□□□□ -0.27
ABR-220ENST00000573325 RPAP3Q9H6T3 665 aaPredicted RBP13.35□□□□□ -0.27
ABR-220ENST00000573325 ZNF236Q9UL36 1845 aa13.34□□□□□ -0.27
ABR-220ENST00000573325 MAGEB6P1A0A0J9YX57 407 aa13.34□□□□□ -0.27
ABR-220ENST00000573325 ADD2P35612 726 aa13.34□□□□□ -0.27
ABR-220ENST00000573325 USP5P45974 858 aa13.34□□□□□ -0.27
ABR-220ENST00000573325 USP14P54578 494 aa13.34□□□□□ -0.27
ABR-220ENST00000573325 ERC1Q8IUD2 1116 aa13.34□□□□□ -0.27
ABR-220ENST00000573325 CLEC10AQ8IUN9 316 aa13.34□□□□□ -0.27
ABR-220ENST00000573325 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
ABR-220ENST00000573325 DYNLL2Q96FJ2 89 aa13.34□□□□□ -0.27
ABR-220ENST00000573325 FRMPD3Q5JV73 1810 aa13.34□□□□□ -0.27
ABR-220ENST00000573325 CHD9Q3L8U1 2897 aa13.34□□□□□ -0.27
ABR-220ENST00000573325 ATP5JP18859 108 aa13.33□□□□□ -0.28
ABR-220ENST00000573325 CYP2C19P33261 490 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms