RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 HIRIP3Q9BW71 556 aaPredicted RBP7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 TNKS2Q9H2K2 1166 aa7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 STRIP2Q9ULQ0 834 aa7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 ROBO2Q9HCK4 1378 aa7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 STK10O94804 968 aaKnown RBP7.81□□□□□ -1.16
TOM1L1-215ENST00000572905 SOGA3Q5TF21 947 aa7.81□□□□□ -1.16
TOM1L1-215ENST00000572905 SCARA3Q6AZY7 606 aa7.81□□□□□ -1.16
TOM1L1-215ENST00000572905 FAM196AQ6ZSG2 479 aa7.81□□□□□ -1.16
TOM1L1-215ENST00000572905 SPACA3Q8IXA5 215 aa7.81□□□□□ -1.16
TOM1L1-215ENST00000572905 KCT2Q8NC54 265 aa7.81□□□□□ -1.16
TOM1L1-215ENST00000572905 FBRSQ9HAH7 460 aa7.81□□□□□ -1.16
TOM1L1-215ENST00000572905 PRDM5Q9NQX1 630 aaPredicted RBP7.81□□□□□ -1.16
TOM1L1-215ENST00000572905 GNAT3A8MTJ3 354 aa7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 IGF2BP3O00425 579 aaKnown RBP eCLIP7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 EOMESO95936 686 aa7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 SSBP05455 408 aaKnown RBP eCLIP7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 CDK8P49336 464 aa7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 IKZF1Q13422 519 aa7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 HDXQ7Z353 690 aa7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 ATG4DQ86TL0 474 aaPredicted RBP7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 ZNF507Q8TCN5 953 aa7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 GAL3ST3Q96A11 431 aa7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 UBP1Q9NZI7 540 aa7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 EFR3BQ9Y2G0 817 aa7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 SNX11Q9Y5W9 270 aa7.8□□□□□ -1.16
TOM1L1-215ENST00000572905 CARMIL2Q6F5E8 1435 aa7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 SOX9P48436 509 aa7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 NASPP49321 788 aaPredicted RBP7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 ETF1P62495 437 aaKnown RBP7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 NKPD1Q17RQ9 610 aa7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 WIPI1Q5MNZ9 446 aaPredicted RBP7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 POU5F2Q8N7G0 328 aa7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 ASB11Q8WXH4 323 aa7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 GATAD2BQ8WXI9 593 aa7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 FAM168AQ92567 244 aa7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 NKD1Q969G9 470 aa7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 LRRC3Q9BY71 257 aa7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 GINM1Q9NU53 330 aa7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.79□□□□□ -1.16
TOM1L1-215ENST00000572905 LRIG2O94898 1065 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 BPNT1O95861 308 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 F13A1P00488 732 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 C8AP07357 584 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 MPP2Q14168 576 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 NKG7Q16617 165 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 CWF19L2Q2TBE0 894 aaKnown RBP7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 BNC2Q6ZN30 1099 aaPredicted RBP7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 CYFIP1Q7L576 1253 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 DPH6Q7L8W6 267 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 SLITRK4Q8IW52 837 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 MIPEPQ99797 713 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 FOXQ1Q9C009 403 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 TPX2Q9ULW0 747 aaKnown RBP7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 PCDHB5Q9Y5E4 795 aa7.78□□□□□ -1.16
TOM1L1-215ENST00000572905 SLITRK5O94991 958 aa7.77□□□□□ -1.17
TOM1L1-215ENST00000572905 CRKP46108 304 aa7.77□□□□□ -1.17
TOM1L1-215ENST00000572905 ZP2Q05996 745 aa7.77□□□□□ -1.17
TOM1L1-215ENST00000572905 RBL2Q08999 1139 aa7.77□□□□□ -1.17
TOM1L1-215ENST00000572905 SEPT6Q14141 434 aa7.77□□□□□ -1.17
TOM1L1-215ENST00000572905 SLBPQ14493 270 aaKnown RBP eCLIP7.77□□□□□ -1.17
TOM1L1-215ENST00000572905 ZNF648Q5T619 568 aaPredicted RBP7.77□□□□□ -1.17
TOM1L1-215ENST00000572905 SLC23A3Q6PIS1 610 aa7.77□□□□□ -1.17
TOM1L1-215ENST00000572905 MAPK8IP1Q9UQF2 711 aa7.77□□□□□ -1.17
TOM1L1-215ENST00000572905 FAM221AA4D161 298 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 PRR33A8MZF0 331 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 CILPO75339 1184 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 SEZ6Q53EL9 994 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 CKAP2LQ8IYA6 745 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 XAGE3Q8WTP9 111 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 CPLX3Q8WVH0 158 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 JARID2Q92833 1246 aaPredicted RBP7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 LNPKQ9C0E8 428 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 WNT10AQ9GZT5 417 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 PITPNM2Q9BZ72 1349 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 CNTNAP4Q9C0A0 1308 aa7.76□□□□□ -1.17
TOM1L1-215ENST00000572905 FAM155AB1AL88 458 aaPredicted RBP7.75□□□□□ -1.17
TOM1L1-215ENST00000572905 GRK4P32298 578 aa7.75□□□□□ -1.17
TOM1L1-215ENST00000572905 CLCN7P51798 805 aa7.75□□□□□ -1.17
TOM1L1-215ENST00000572905 CDKAL1Q5VV42 579 aa7.75□□□□□ -1.17
TOM1L1-215ENST00000572905 NBPF6Q5VWK0 638 aa7.75□□□□□ -1.17
TOM1L1-215ENST00000572905 NBPF4Q96M43 638 aa7.75□□□□□ -1.17
TOM1L1-215ENST00000572905 SNCAIPQ9Y6H5 919 aa7.75□□□□□ -1.17
TOM1L1-215ENST00000572905 RBAK-RBAKDNI3L0D1 243 aa7.74□□□□□ -1.17
TOM1L1-215ENST00000572905 TLR3O15455 904 aaKnown RBP7.74□□□□□ -1.17
TOM1L1-215ENST00000572905 ZNF165P49910 485 aa7.74□□□□□ -1.17
TOM1L1-215ENST00000572905 FZD5Q13467 585 aa7.74□□□□□ -1.17
TOM1L1-215ENST00000572905 REC114Q7Z4M0 266 aa7.74□□□□□ -1.17
TOM1L1-215ENST00000572905 RIN3Q8TB24 985 aa7.74□□□□□ -1.17
TOM1L1-215ENST00000572905 PMFBP1Q8TBY8 1022 aa7.74□□□□□ -1.17
TOM1L1-215ENST00000572905 HSPA12BQ96MM6 686 aa7.74□□□□□ -1.17
TOM1L1-215ENST00000572905 SRRTQ9BXP5 876 aaKnown RBP7.74□□□□□ -1.17
TOM1L1-215ENST00000572905 ZNF408Q9H9D4 720 aa7.74□□□□□ -1.17
TOM1L1-215ENST00000572905 MCM4P33991 863 aa7.73□□□□□ -1.17
TOM1L1-215ENST00000572905 RPL6Q02878 288 aaKnown RBP7.73□□□□□ -1.17
TOM1L1-215ENST00000572905 SFRP5Q5T4F7 317 aa7.73□□□□□ -1.17
TOM1L1-215ENST00000572905 PRAMEF13Q5VWM6 474 aa7.73□□□□□ -1.17
TOM1L1-215ENST00000572905 LETMD1Q6P1Q0 360 aa7.73□□□□□ -1.17
TOM1L1-215ENST00000572905 HID1Q8IV36 788 aa7.73□□□□□ -1.17
TOM1L1-215ENST00000572905 REXO1Q8N1G1 1221 aaKnown RBP7.73□□□□□ -1.17
TOM1L1-215ENST00000572905 MFSD4AQ8N468 514 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms