RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 METTL16Q86W50 562 aaKnown RBP6.74□□□□□ -1.33
NUP88-202ENST00000570937 SLITRK4Q8IW52 837 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 XAGE3Q8WTP9 111 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 PPP1R13LQ8WUF5 828 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 CYB5D2Q8WUJ1 264 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 EAF1Q96JC9 268 aaPredicted RBP6.74□□□□□ -1.33
NUP88-202ENST00000570937 HRASLS5Q96KN8 279 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 SPON2Q9BUD6 331 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 EHMT1Q9H9B1 1298 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 UBP1Q9NZI7 540 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 DDX41Q9UJV9 622 aaKnown RBP6.74□□□□□ -1.33
NUP88-202ENST00000570937 BAZ1AQ9NRL2 1556 aaPredicted RBP6.74□□□□□ -1.33
NUP88-202ENST00000570937 DNAJA2O60884 412 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 ITIH2P19823 946 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 CYP7A1P22680 504 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 ETV3P41162 512 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 KIR3DL1P43629 444 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 RACK1P63244 317 aaKnown RBP6.73□□□□□ -1.33
NUP88-202ENST00000570937 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 ZNF394Q53GI3 561 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 CDH24Q86UP0 819 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 AGBL5Q8NDL9 886 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 FLCNQ8NFG4 579 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 CEP131Q9UPN4 1083 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 PCDHB14Q9Y5E9 798 aa6.73□□□□□ -1.33
NUP88-202ENST00000570937 PRR33A8MZF0 331 aa6.72□□□□□ -1.33
NUP88-202ENST00000570937 CHURC1-FNTBB4DL54 471 aa6.72□□□□□ -1.33
NUP88-202ENST00000570937 MLECQ14165 292 aa6.72□□□□□ -1.33
NUP88-202ENST00000570937 SEZ6Q53EL9 994 aa6.72□□□□□ -1.33
NUP88-202ENST00000570937 SPRED2Q7Z698 418 aa6.72□□□□□ -1.33
NUP88-202ENST00000570937 MFSD4AQ8N468 514 aa6.72□□□□□ -1.33
NUP88-202ENST00000570937 NKD1Q969G9 470 aa6.72□□□□□ -1.33
NUP88-202ENST00000570937 PCDHGB7Q9Y5F8 929 aa6.72□□□□□ -1.33
NUP88-202ENST00000570937 CAPN6Q9Y6Q1 641 aa6.72□□□□□ -1.33
NUP88-202ENST00000570937 NCAPD3P42695 1498 aa6.72□□□□□ -1.33
NUP88-202ENST00000570937 SLC22A31A6NKX4 558 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 ZNF165P49910 485 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 BNIP3Q12983 259 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 AOC3Q16853 763 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 ZNF574Q6ZN55 896 aaPredicted RBP6.71□□□□□ -1.34
NUP88-202ENST00000570937 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 TP53INP2Q8IXH6 220 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 ABI1Q8IZP0 508 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 ASB11Q8WXH4 323 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 CCDC74BQ96LY2 380 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 GMIPQ9P107 970 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 KLHL3Q9UH77 587 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 ST14Q9Y5Y6 855 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 COL17A1Q9UMD9 1497 aaPredicted RBP6.71□□□□□ -1.34
NUP88-202ENST00000570937 PITPNM2Q9BZ72 1349 aa6.71□□□□□ -1.34
NUP88-202ENST00000570937 SMARCA2P51531 1590 aa6.7□□□□□ -1.34
NUP88-202ENST00000570937 CD8BP10966 210 aa6.7□□□□□ -1.34
NUP88-202ENST00000570937 HDLBPQ00341 1268 aaKnown RBP6.7□□□□□ -1.34
NUP88-202ENST00000570937 CBLL1Q75N03 491 aa6.7□□□□□ -1.34
NUP88-202ENST00000570937 ZNF654Q8IZM8 581 aa6.7□□□□□ -1.34
NUP88-202ENST00000570937 PIWIL2Q8TC59 973 aaKnown RBP6.7□□□□□ -1.34
NUP88-202ENST00000570937 SEMA3GQ9NS98 782 aa6.7□□□□□ -1.34
NUP88-202ENST00000570937 ADGRE2Q9UHX3 823 aa6.7□□□□□ -1.34
NUP88-202ENST00000570937 SMARCA4P51532 1647 aa6.69□□□□□ -1.34
NUP88-202ENST00000570937 ATAD2BQ9ULI0 1458 aa6.69□□□□□ -1.34
NUP88-202ENST00000570937 MEIS3P2A8K0S8 358 aa6.69□□□□□ -1.34
NUP88-202ENST00000570937 FAM155AB1AL88 458 aaPredicted RBP6.69□□□□□ -1.34
NUP88-202ENST00000570937 RGS13O14921 159 aa6.69□□□□□ -1.34
NUP88-202ENST00000570937 FUT4P22083 530 aa6.69□□□□□ -1.34
NUP88-202ENST00000570937 CLCQ05315 142 aa6.69□□□□□ -1.34
NUP88-202ENST00000570937 CDCP2Q5VXM1 449 aa6.69□□□□□ -1.34
NUP88-202ENST00000570937 THAP5Q7Z6K1 395 aa6.69□□□□□ -1.34
NUP88-202ENST00000570937 RNF141Q8WVD5 230 aa6.69□□□□□ -1.34
NUP88-202ENST00000570937 CBX7O95931 251 aa6.68□□□□□ -1.34
NUP88-202ENST00000570937 IRAK1P51617 712 aa6.68□□□□□ -1.34
NUP88-202ENST00000570937 TNK2Q07912 1038 aa6.68□□□□□ -1.34
NUP88-202ENST00000570937 LRRFIP1Q32MZ4 808 aaKnown RBP6.68□□□□□ -1.34
NUP88-202ENST00000570937 ANGEL2Q5VTE6 544 aaKnown RBP6.68□□□□□ -1.34
NUP88-202ENST00000570937 GK5Q6ZS86 529 aa6.68□□□□□ -1.34
NUP88-202ENST00000570937 NT5DC4Q86YG4 428 aa6.68□□□□□ -1.34
NUP88-202ENST00000570937 BAHD1Q8TBE0 780 aaPredicted RBP6.68□□□□□ -1.34
NUP88-202ENST00000570937 Q96M66 194 aa6.68□□□□□ -1.34
NUP88-202ENST00000570937 HSPA12BQ96MM6 686 aa6.68□□□□□ -1.34
NUP88-202ENST00000570937 CNNM2Q9H8M5 875 aa6.68□□□□□ -1.34
NUP88-202ENST00000570937 MCM4P33991 863 aa6.67□□□□□ -1.34
NUP88-202ENST00000570937 CD96P40200 585 aa6.67□□□□□ -1.34
NUP88-202ENST00000570937 CCNFP41002 786 aa6.67□□□□□ -1.34
NUP88-202ENST00000570937 ARSHQ5FYA8 562 aa6.67□□□□□ -1.34
NUP88-202ENST00000570937 OVOS1Q6IE37 1185 aa6.67□□□□□ -1.34
NUP88-202ENST00000570937 PHACTR4Q8IZ21 702 aa6.67□□□□□ -1.34
NUP88-202ENST00000570937 TMEM40Q8WWA1 233 aa6.67□□□□□ -1.34
NUP88-202ENST00000570937 VWCEQ96DN2 955 aa6.67□□□□□ -1.34
NUP88-202ENST00000570937 ATG4CQ96DT6 458 aa6.67□□□□□ -1.34
NUP88-202ENST00000570937 ZNRF3Q9ULT6 936 aa6.67□□□□□ -1.34
NUP88-202ENST00000570937 IMPDH2P12268 514 aa6.66□□□□□ -1.34
NUP88-202ENST00000570937 COL9A2Q14055 689 aaPredicted RBP6.66□□□□□ -1.34
NUP88-202ENST00000570937 PLCL1Q15111 1095 aa6.66□□□□□ -1.34
NUP88-202ENST00000570937 CDKAL1Q5VV42 579 aa6.66□□□□□ -1.34
NUP88-202ENST00000570937 NLRC3Q7RTR2 1065 aa6.66□□□□□ -1.34
NUP88-202ENST00000570937 RASGRP4Q8TDF6 673 aa6.66□□□□□ -1.34
NUP88-202ENST00000570937 SPATA32Q96LK8 384 aa6.66□□□□□ -1.34
NUP88-202ENST00000570937 KREMEN1Q96MU8 473 aa6.66□□□□□ -1.34
NUP88-202ENST00000570937 KIF2CQ99661 725 aa6.66□□□□□ -1.34
NUP88-202ENST00000570937 ASPNQ9BXN1 380 aa6.66□□□□□ -1.34
NUP88-202ENST00000570937 GPR62Q9BZJ7 368 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms