RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	PTPRF	P10586	1907 aa		10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	RFX7	Q2KHR2	1363 aa		10.38	□□□□□ -0.75
SCAPER-223	ENST00000569784	FLT1	P17948	1338 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	COL2A1	P02458	1487 aa	Predicted RBP	10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	MYH1	P12882	1939 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	ZBTB7B	O15156	539 aa	Predicted RBP	10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	IGSF3	O75054	1194 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	GDF11	O95390	407 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	POLR3D	P05423	398 aa	Predicted RBP	10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	IFIT2	P09913	472 aa	Known RBP	10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	ELN	P15502	786 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	CTGF	P29279	349 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	MAP3K10	Q02779	954 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	MTMR2	Q13614	643 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	MOGS	Q13724	837 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	PDE3A	Q14432	1141 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	TTF1	Q15361	905 aa	Predicted RBP	10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	PDE4DIP	Q5VU43	2346 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	TTC6	Q86TZ1	520 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	CLASRP	Q8N2M8	674 aa	Known RBP	10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	MIGA1	Q8NAN2	632 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	CABP5	Q9NP86	173 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	PCDH10	Q9P2E7	1040 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	PALD1	Q9ULE6	856 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	LHX6	Q9UPM6	363 aa		10.37	□□□□□ -0.75
SCAPER-223	ENST00000569784	ADGRA2	Q96PE1	1338 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	C19orf81	C9J6K1	198 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	USP17L10	C9JJH3	530 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	FARP2	O94887	1054 aa	Predicted RBP	10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	INHA	P05111	366 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	GJB1	P08034	283 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	GJA8	P48165	433 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	DYNLL1	P63167	89 aa	Known RBP	10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	RAB3GAP1	Q15042	981 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	ZYX	Q15942	572 aa	Known RBP	10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	FAM110C	Q1W6H9	321 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	HABP4	Q5JVS0	413 aa	Known RBP	10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	WDR78	Q5VTH9	848 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	AMOTL1	Q8IY63	956 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	PANK1	Q8TE04	598 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	ZNF384	Q8TF68	577 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	DNAJC2	Q99543	621 aa	Known RBP	10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	UNC93B1	Q9H1C4	597 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	IL1RAPL2	Q9NP60	686 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	PIH1D3	Q9NQM4	214 aa	Known RBP	10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	DBNL	Q9UJU6	430 aa	Known RBP	10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	NOP58	Q9Y2X3	529 aa	Known RBP	10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	NR2E3	Q9Y5X4	410 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	CDK5RAP2	Q96SN8	1893 aa		10.36	□□□□□ -0.75
SCAPER-223	ENST00000569784	ZBED9	Q6R2W3	1325 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	FOCAD	Q5VW36	1801 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	MAGEB6P1	A0A0J9YX57	407 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	MPHOSPH10	O00566	681 aa	Known RBP	10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	PPP4C	P60510	307 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	CEP85	Q6P2H3	762 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	USP17L2	Q6R6M4	530 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	PXYLP1	Q8TE99	480 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	U2AF1L4	Q8WU68	220 aa	Known RBP	10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	EAF2	Q96CJ1	260 aa	Predicted RBP	10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	DDRGK1	Q96HY6	314 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	DEFB118	Q96PH6	123 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	PAGR1	Q9BTK6	254 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	GINM1	Q9NU53	330 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	TLR7	Q9NYK1	1049 aa	Known RBP	10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	DDX19B	Q9UMR2	479 aa		10.35	□□□□□ -0.75
SCAPER-223	ENST00000569784	LOC285556	D6RIA3	1793 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	SGPL1	O95470	568 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	RLBP1	P12271	317 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	CAPN2	P17655	700 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	EMP3	P54852	163 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	BACE1	P56817	501 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	IRF5	Q13568	498 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	CERKL	Q49MI3	558 aa	Predicted RBP	10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	ADGRA1	Q86SQ6	560 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	GPRC5A	Q8NFJ5	357 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	KIF1BP	Q96EK5	621 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	NUDT12	Q9BQG2	462 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	WDR18	Q9BV38	432 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	SERPINB13	Q9UIV8	391 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	ZBTB21	Q9ULJ3	1066 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	NDUFB9	Q9Y6M9	179 aa		10.34	□□□□□ -0.75
SCAPER-223	ENST00000569784	TNRC18	O15417	2968 aa	Predicted RBP	10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784		H0YGN5	161 aa		10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	GLRX3	O76003	335 aa	Known RBP	10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	GH2	P01242	217 aa		10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	HMGCR	P04035	888 aa		10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	CYP2B6	P20813	491 aa		10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	USP14	P54578	494 aa		10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	CCNA1	P78396	465 aa		10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	ABCB5	Q2M3G0	1257 aa		10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	SH3D19	Q5HYK7	790 aa		10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	SLC9C2	Q5TAH2	1124 aa		10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	TMED8	Q6PL24	325 aa	Predicted RBP	10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.33	□□□□□ -0.76
SCAPER-223	ENST00000569784	RHPN1	Q8TCX5	695 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms