RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 PNMA1Q8ND90 353 aa12.72□□□□□ -0.37
PDXDC1-216ENST00000569715 CEP95Q96GE4 821 aa12.72□□□□□ -0.37
PDXDC1-216ENST00000569715 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
PDXDC1-216ENST00000569715 TFIP11Q9UBB9 837 aaKnown RBP12.72□□□□□ -0.37
PDXDC1-216ENST00000569715 GREB1LQ9C091 1923 aaPredicted RBP12.72□□□□□ -0.37
PDXDC1-216ENST00000569715 KIF28PB7ZC32 967 aa12.72□□□□□ -0.37
PDXDC1-216ENST00000569715 ANKS1AQ92625 1134 aa12.72□□□□□ -0.37
PDXDC1-216ENST00000569715 TMEM47Q9BQJ4 181 aa12.72□□□□□ -0.37
PDXDC1-216ENST00000569715 MTMR7Q9Y216 660 aa12.72□□□□□ -0.37
PDXDC1-216ENST00000569715 CCDC196A0A1B0GTZ2 297 aa12.71□□□□□ -0.37
PDXDC1-216ENST00000569715 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.37
PDXDC1-216ENST00000569715 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
PDXDC1-216ENST00000569715 CIAPIN1Q6FI81 312 aa12.71□□□□□ -0.37
PDXDC1-216ENST00000569715 FTOQ9C0B1 505 aaKnown RBP eCLIP12.71□□□□□ -0.37
PDXDC1-216ENST00000569715 HLA-DOAP06340 250 aa12.71□□□□□ -0.37
PDXDC1-216ENST00000569715 TMTC3Q6ZXV5 915 aa12.71□□□□□ -0.37
PDXDC1-216ENST00000569715 ZSCAN29Q8IWY8 852 aaPredicted RBP12.71□□□□□ -0.37
PDXDC1-216ENST00000569715 LTBP3Q9NS15 1303 aa12.71□□□□□ -0.38
PDXDC1-216ENST00000569715 SKOR2Q2VWA4 1001 aaPredicted RBP12.71□□□□□ -0.38
PDXDC1-216ENST00000569715 KRT40Q6A162 431 aa12.71□□□□□ -0.38
PDXDC1-216ENST00000569715 OGFOD1Q8N543 542 aa12.71□□□□□ -0.38
PDXDC1-216ENST00000569715 AGBL3Q8NEM8 1001 aa12.71□□□□□ -0.38
PDXDC1-216ENST00000569715 FHDC1Q9C0D6 1143 aaPredicted RBP12.71□□□□□ -0.38
PDXDC1-216ENST00000569715 ZSCAN16Q9H4T2 348 aaPredicted RBP12.71□□□□□ -0.38
PDXDC1-216ENST00000569715 PLIN4Q96Q06 1357 aa12.71□□□□□ -0.38
PDXDC1-216ENST00000569715 TCP10L2B9ZVM9 353 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 CALM1P0DP23 149 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 CALM2P0DP24 149 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 CALM3P0DP25 149 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 NT5C2P49902 561 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 SRBD1Q8N5C6 995 aaKnown RBP12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 SHISA4Q96DD7 197 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 HDAC9Q9UKV0 1011 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 CNTNAP5Q8WYK1 1306 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 KRT85P78386 507 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 TRIM22Q8IYM9 498 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 STAG2Q8N3U4 1231 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 EHD4Q9H223 541 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 EIF6P56537 245 aaKnown RBP12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 GSE1Q14687 1217 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 RBM28Q9NW13 759 aaKnown RBP12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 ZNF70Q9UC06 446 aaPredicted RBP12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 SWAP70Q9UH65 585 aa12.7□□□□□ -0.38
PDXDC1-216ENST00000569715 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 ILDR2Q71H61 639 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 MYH4Q9Y623 1939 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 NPM3O75607 178 aaKnown RBP12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 EGFRP00533 1210 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 CEBPZQ03701 1054 aaKnown RBP12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 PPP2R5BQ15173 497 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 PKN1Q16512 942 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 CAVIN1Q6NZI2 390 aaKnown RBP12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 DHX36Q9H2U1 1008 aaKnown RBP12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 KCNJ14Q9UNX9 436 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 ATRNL1Q5VV63 1379 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 IGKV6D-41A0A0C4DH26 115 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 DEXIO95424 95 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 SLC35G1Q2M3R5 365 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 CCDC178Q5BJE1 867 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 PIBF1Q8WXW3 757 aa12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 RNF26Q9BY78 433 aaPredicted RBP12.69□□□□□ -0.38
PDXDC1-216ENST00000569715 CNTNAP1P78357 1384 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 ENTPD3O75355 529 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 GRM4Q14833 912 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 NBPF9Q3BBW0 867 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 MTMR4Q9NYA4 1195 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 PI4KBQ9UBF8 816 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 MAD2L2Q9UI95 211 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 SCAF8Q9UPN6 1271 aaKnown RBP12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 V9GY48 417 aaPredicted RBP12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 ZNF541Q9H0D2 1346 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 NOVP48745 357 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 LEO1Q8WVC0 666 aaPredicted RBP12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 USP28Q96RU2 1077 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 VEZTQ9HBM0 779 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 GOLGA8HP0CJ92 632 aa12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 VEGFAP15692 232 aaPredicted RBP12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 LRRC47Q8N1G4 583 aaKnown RBP12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 ZBED3Q96IU2 234 aaPredicted RBP12.68□□□□□ -0.38
PDXDC1-216ENST00000569715 MPHOSPH10O00566 681 aaKnown RBP12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 CPVLQ9H3G5 476 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 MYOZ2Q9NPC6 264 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 GJA3Q9Y6H8 435 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 FZD9O00144 591 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 WNT10BO00744 389 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 PRPF3O43395 683 aaKnown RBP12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 TNIP1Q15025 636 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 WASF1Q92558 559 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 SPATA32Q96LK8 384 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 TMOD2Q9NZR1 351 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 VPS54Q9P1Q0 977 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 TMEM63CQ9P1W3 806 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 SBF1O95248 1867 aa12.67□□□□□ -0.38
PDXDC1-216ENST00000569715 COL2A1P02458 1487 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms