RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PAG1Q9NWQ8 432 aa16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 COLQQ9Y215 455 aaPredicted RBP16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 FRMPD3Q5JV73 1810 aa16.8■□□□□ 0.28
GTF3C1-211ENST00000569653 A0A1W2PRG0 241 aa16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 ATP5JP18859 108 aa16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 ADD2P35612 726 aa16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 PDE3AQ14432 1141 aa16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 ABCB5Q2M3G0 1257 aa16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 CERKLQ49MI3 558 aaPredicted RBP16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 USP17L2Q6R6M4 530 aa16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 TTC6Q86TZ1 520 aa16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 CLEC10AQ8IUN9 316 aa16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 HAUS7Q99871 368 aa16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 CRISPLD2Q9H0B8 497 aa16.79■□□□□ 0.28
GTF3C1-211ENST00000569653 DNAH12Q6ZR08 3092 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 CYP2D7A0A087X1C5 515 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 FARP2O94887 1054 aaPredicted RBP16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 MBD4O95243 580 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 MNX1P50219 401 aaPredicted RBP16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 SEPT2Q15019 361 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 RAB3GAP1Q15042 981 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 KIAA1755Q5JYT7 1200 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 NKX2-3Q8TAU0 364 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 DIS3LQ8TF46 1054 aaKnown RBP16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 USP6NLQ92738 828 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 DYNLL2Q96FJ2 89 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 KIAA1683Q9H0B3 1180 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 MCM9Q9NXL9 1143 aa16.78■□□□□ 0.28
GTF3C1-211ENST00000569653 GREB1LQ9C091 1923 aaPredicted RBP16.77■□□□□ 0.28
GTF3C1-211ENST00000569653 VCAM1P19320 739 aa16.77■□□□□ 0.28
GTF3C1-211ENST00000569653 ERVK-9P63128 1117 aa16.77■□□□□ 0.28
GTF3C1-211ENST00000569653 ERVK-24P63145 666 aa16.77■□□□□ 0.28
GTF3C1-211ENST00000569653 SIAH1Q8IUQ4 282 aa16.77■□□□□ 0.28
GTF3C1-211ENST00000569653 GPRC5AQ8NFJ5 357 aa16.77■□□□□ 0.28
GTF3C1-211ENST00000569653 PAGR1Q9BTK6 254 aa16.77■□□□□ 0.28
GTF3C1-211ENST00000569653 CRNKL1Q9BZJ0 848 aaKnown RBP16.77■□□□□ 0.28
GTF3C1-211ENST00000569653 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.77■□□□□ 0.28
GTF3C1-211ENST00000569653 COL11A1P12107 1806 aaPredicted RBP16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 HMGCRP04035 888 aa16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 POLR3DP05423 398 aaPredicted RBP16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 CYP2B6P20813 491 aa16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 FXR1P51114 621 aaKnown RBP eCLIP16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 MORN1Q5T089 497 aa16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 MAP3K21Q5TCX8 1036 aa16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 TSHZ3Q63HK5 1081 aa16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 CATSPERGQ6ZRH7 1159 aa16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 FEZ1Q99689 392 aa16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 BTBD7Q9P203 1132 aa16.76■□□□□ 0.27
GTF3C1-211ENST00000569653 CCL14Q16627 93 aa16.75■□□□□ 0.27
GTF3C1-211ENST00000569653 GCC1Q96CN9 775 aa16.75■□□□□ 0.27
GTF3C1-211ENST00000569653 SPDYE16A6NNV3 312 aaPredicted RBP16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L15C9J2P7 530 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L13C9JLJ4 530 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L11C9JVI0 530 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L18D6R9N7 530 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L22D6RA61 530 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L17D6RBQ6 530 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L19D6RCP7 530 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L20D6RJB6 530 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 AKR1B1P15121 316 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L24Q0WX57 530 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 GPR142Q7Z601 462 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 DPF3Q92784 378 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 LRRCC1Q9C099 1032 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 PUS7LQ9H0K6 701 aaKnown RBP16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 PRO3102Q9H379 93 aa16.74■□□□□ 0.27
GTF3C1-211ENST00000569653 LAMA3Q16787 3333 aa16.73■□□□□ 0.27
GTF3C1-211ENST00000569653 TFRCP02786 760 aaKnown RBP16.73■□□□□ 0.27
GTF3C1-211ENST00000569653 UBE3CQ15386 1083 aa16.73■□□□□ 0.27
GTF3C1-211ENST00000569653 PAWRQ96IZ0 340 aaKnown RBP16.73■□□□□ 0.27
GTF3C1-211ENST00000569653 RPAP3Q9H6T3 665 aaPredicted RBP16.73■□□□□ 0.27
GTF3C1-211ENST00000569653 FLRT1Q9NZU1 646 aa16.73■□□□□ 0.27
GTF3C1-211ENST00000569653 PCDH10Q9P2E7 1040 aa16.73■□□□□ 0.27
GTF3C1-211ENST00000569653 ZNF236Q9UL36 1845 aa16.73■□□□□ 0.27
GTF3C1-211ENST00000569653 XRCC5P13010 732 aaKnown RBP16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 PRKAR2AP13861 404 aaKnown RBP16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 MAPK4P31152 587 aa16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 C12orf60Q5U649 245 aa16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 CHRDL2Q6WN34 429 aa16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 LBX2Q6XYB7 198 aa16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 NUDT12Q9BQG2 462 aa16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 DCTPP1Q9H773 170 aa16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 CABP5Q9NP86 173 aa16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 RABGAP1Q9Y3P9 1069 aa16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 PCDHB15Q9Y5E8 787 aa16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 ZNFX1Q9P2E3 1918 aaKnown RBP16.72■□□□□ 0.27
GTF3C1-211ENST00000569653 RPTORQ8N122 1335 aa16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L12C9JPN9 530 aa16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 USP17L21D6R901 530 aa16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 MPHOSPH10O00566 681 aaKnown RBP16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 USP14P54578 494 aa16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 CACNB2Q08289 660 aaPredicted RBP16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 PLEKHH3Q7Z736 793 aa16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 OTUD7AQ8TE49 926 aaPredicted RBP16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 SOCS4Q8WXH5 440 aa16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 ATP8A2Q9NTI2 1148 aa16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 RBM27Q9P2N5 1060 aaKnown RBP16.71■□□□□ 0.27
GTF3C1-211ENST00000569653 IGHA2P01877 340 aa16.7■□□□□ 0.26
GTF3C1-211ENST00000569653 CCND3P30281 292 aaPredicted RBP16.7■□□□□ 0.26
GTF3C1-211ENST00000569653 CDK8P49336 464 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms