RNA–Protein interactions for RNA: ENST00000569601.5

RPUSD1-210, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-210ENST00000569601 KIAA1683Q9H0B3 1180 aa28.32■■■□□ 2.12
RPUSD1-210ENST00000569601 DCTPP1Q9H773 170 aa28.32■■■□□ 2.12
RPUSD1-210ENST00000569601 USP14P54578 494 aa28.31■■■□□ 2.12
RPUSD1-210ENST00000569601 SEPT2Q15019 361 aa28.31■■■□□ 2.12
RPUSD1-210ENST00000569601 POTEEQ6S8J3 1075 aa28.31■■■□□ 2.12
RPUSD1-210ENST00000569601 UBE3CQ15386 1083 aa28.3■■■□□ 2.12
RPUSD1-210ENST00000569601 Q3C1V9 767 aa28.3■■■□□ 2.12
RPUSD1-210ENST00000569601 SLC44A5Q8NCS7 719 aa28.3■■■□□ 2.12
RPUSD1-210ENST00000569601 PAGR1Q9BTK6 254 aa28.3■■■□□ 2.12
RPUSD1-210ENST00000569601 ECHDC1Q9NTX5 307 aa28.3■■■□□ 2.12
RPUSD1-210ENST00000569601 USP17L15C9J2P7 530 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 USP17L13C9JLJ4 530 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 USP17L11C9JVI0 530 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 USP17L18D6R9N7 530 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 USP17L22D6RA61 530 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 USP17L17D6RBQ6 530 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 USP17L19D6RCP7 530 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 USP17L20D6RJB6 530 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 MPHOSPH10O00566 681 aaKnown RBP28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 SGPL1O95470 568 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 ERVK-9P63128 1117 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 ERVK-24P63145 666 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 USP17L24Q0WX57 530 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 GTF3C2Q8WUA4 911 aaPredicted RBP28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 DYNLL2Q96FJ2 89 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 ATP8A2Q9NTI2 1148 aa28.29■■■□□ 2.12
RPUSD1-210ENST00000569601 VCAM1P19320 739 aa28.28■■■□□ 2.12
RPUSD1-210ENST00000569601 UBE2Q1Q7Z7E8 422 aa28.28■■■□□ 2.12
RPUSD1-210ENST00000569601 GCC1Q96CN9 775 aa28.28■■■□□ 2.12
RPUSD1-210ENST00000569601 DEFB118Q96PH6 123 aa28.28■■■□□ 2.12
RPUSD1-210ENST00000569601 ZSCAN25Q6NSZ9 544 aa28.27■■■□□ 2.12
RPUSD1-210ENST00000569601 CATSPERGQ6ZRH7 1159 aa28.27■■■□□ 2.12
RPUSD1-210ENST00000569601 PORCNQ9H237 461 aa28.27■■■□□ 2.12
RPUSD1-210ENST00000569601 PAK6Q9NQU5 681 aaPredicted RBP28.27■■■□□ 2.12
RPUSD1-210ENST00000569601 SWAP70Q9UH65 585 aa28.27■■■□□ 2.12
RPUSD1-210ENST00000569601 CYP2D7A0A087X1C5 515 aa28.26■■■□□ 2.11
RPUSD1-210ENST00000569601 SMIM22K7EJ46 135 aa28.26■■■□□ 2.11
RPUSD1-210ENST00000569601 HMGCRP04035 888 aa28.26■■■□□ 2.11
RPUSD1-210ENST00000569601 MAPK4P31152 587 aa28.26■■■□□ 2.11
RPUSD1-210ENST00000569601 PUS7LQ9H0K6 701 aaKnown RBP28.26■■■□□ 2.11
RPUSD1-210ENST00000569601 A0A1W2PRG0 241 aa28.25■■■□□ 2.11
RPUSD1-210ENST00000569601 CNMDO75829 334 aa28.25■■■□□ 2.11
RPUSD1-210ENST00000569601 CYP2B6P20813 491 aa28.25■■■□□ 2.11
RPUSD1-210ENST00000569601 TRIM32Q13049 653 aa28.25■■■□□ 2.11
RPUSD1-210ENST00000569601 TSHZ3Q63HK5 1081 aa28.25■■■□□ 2.11
RPUSD1-210ENST00000569601 NUDT12Q9BQG2 462 aa28.25■■■□□ 2.11
RPUSD1-210ENST00000569601 RABGAP1Q9Y3P9 1069 aa28.25■■■□□ 2.11
RPUSD1-210ENST00000569601 SLC4A4Q9Y6R1 1079 aa28.25■■■□□ 2.11
RPUSD1-210ENST00000569601 FARP2O94887 1054 aaPredicted RBP28.24■■■□□ 2.11
RPUSD1-210ENST00000569601 C12orf60Q5U649 245 aa28.24■■■□□ 2.11
RPUSD1-210ENST00000569601 CCAR1Q8IX12 1150 aaKnown RBP28.24■■■□□ 2.11
RPUSD1-210ENST00000569601 TRIB2Q92519 343 aa28.24■■■□□ 2.11
RPUSD1-210ENST00000569601 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.24■■■□□ 2.11
RPUSD1-210ENST00000569601 RPAP3Q9H6T3 665 aaPredicted RBP28.24■■■□□ 2.11
RPUSD1-210ENST00000569601 PCDHB15Q9Y5E8 787 aa28.24■■■□□ 2.11
RPUSD1-210ENST00000569601 USP17L12C9JPN9 530 aa28.23■■■□□ 2.11
RPUSD1-210ENST00000569601 USP17L21D6R901 530 aa28.23■■■□□ 2.11
RPUSD1-210ENST00000569601 TFRCP02786 760 aaKnown RBP28.23■■■□□ 2.11
RPUSD1-210ENST00000569601 TMEM179Q6ZVK1 233 aa28.23■■■□□ 2.11
RPUSD1-210ENST00000569601 GPR142Q7Z601 462 aa28.23■■■□□ 2.11
RPUSD1-210ENST00000569601 SOCS4Q8WXH5 440 aa28.23■■■□□ 2.11
RPUSD1-210ENST00000569601 GPATCH3Q96I76 525 aa28.23■■■□□ 2.11
RPUSD1-210ENST00000569601 AKR1B1P15121 316 aa28.22■■■□□ 2.11
RPUSD1-210ENST00000569601 AMOTL1Q8IY63 956 aa28.22■■■□□ 2.11
RPUSD1-210ENST00000569601 DPF3Q92784 378 aa28.22■■■□□ 2.11
RPUSD1-210ENST00000569601 RLFQ13129 1914 aa28.22■■■□□ 2.11
RPUSD1-210ENST00000569601 H0YGN5 161 aa28.21■■■□□ 2.11
RPUSD1-210ENST00000569601 CDK8P49336 464 aa28.21■■■□□ 2.11
RPUSD1-210ENST00000569601 LBX2Q6XYB7 198 aa28.21■■■□□ 2.11
RPUSD1-210ENST00000569601 PLEKHH3Q7Z736 793 aa28.21■■■□□ 2.11
RPUSD1-210ENST00000569601 CLEC10AQ8IUN9 316 aa28.21■■■□□ 2.11
RPUSD1-210ENST00000569601 KBTBD3Q8NAB2 608 aa28.21■■■□□ 2.11
RPUSD1-210ENST00000569601 USP6NLQ92738 828 aa28.21■■■□□ 2.11
RPUSD1-210ENST00000569601 DDRGK1Q96HY6 314 aa28.21■■■□□ 2.11
RPUSD1-210ENST00000569601 CRISPLD2Q9H0B8 497 aa28.21■■■□□ 2.11
RPUSD1-210ENST00000569601 RPTORQ8N122 1335 aa28.2■■■□□ 2.11
RPUSD1-210ENST00000569601 SPDYE16A6NNV3 312 aaPredicted RBP28.2■■■□□ 2.1
RPUSD1-210ENST00000569601 XRCC5P13010 732 aaKnown RBP28.2■■■□□ 2.1
RPUSD1-210ENST00000569601 RRP1P56182 461 aaKnown RBP28.2■■■□□ 2.1
RPUSD1-210ENST00000569601 HABP4Q5JVS0 413 aaKnown RBP28.2■■■□□ 2.1
RPUSD1-210ENST00000569601 MORN1Q5T089 497 aa28.2■■■□□ 2.1
RPUSD1-210ENST00000569601 HTATIP2Q9BUP3 242 aa28.2■■■□□ 2.1
RPUSD1-210ENST00000569601 HMX1Q9NP08 348 aaPredicted RBP28.2■■■□□ 2.1
RPUSD1-210ENST00000569601 BTBD7Q9P203 1132 aa28.2■■■□□ 2.1
RPUSD1-210ENST00000569601 CAPN2P17655 700 aa28.19■■■□□ 2.1
RPUSD1-210ENST00000569601 CCNA1P78396 465 aa28.19■■■□□ 2.1
RPUSD1-210ENST00000569601 CTR9Q6PD62 1173 aa28.19■■■□□ 2.1
RPUSD1-210ENST00000569601 C16orf86Q6ZW13 317 aa28.19■■■□□ 2.1
RPUSD1-210ENST00000569601 SIAH1Q8IUQ4 282 aa28.19■■■□□ 2.1
RPUSD1-210ENST00000569601 CWC22Q9HCG8 908 aaKnown RBP28.19■■■□□ 2.1
RPUSD1-210ENST00000569601 KIAA1755Q5JYT7 1200 aa28.18■■■□□ 2.1
RPUSD1-210ENST00000569601 CCDC17Q96LX7 622 aa28.18■■■□□ 2.1
RPUSD1-210ENST00000569601 STRBPQ96SI9 672 aaKnown RBP28.18■■■□□ 2.1
RPUSD1-210ENST00000569601 RGS2P41220 211 aa28.17■■■□□ 2.1
RPUSD1-210ENST00000569601 ICA1Q05084 483 aa28.17■■■□□ 2.1
RPUSD1-210ENST00000569601 OSBP2Q969R2 916 aa28.17■■■□□ 2.1
RPUSD1-210ENST00000569601 PARP14Q460N5 1801 aa28.17■■■□□ 2.1
RPUSD1-210ENST00000569601 ALPK3Q96L96 1907 aa28.16■■■□□ 2.1
RPUSD1-210ENST00000569601 A0A0G2JMZ2 1700 aa28.16■■■□□ 2.1
RPUSD1-210ENST00000569601 RNF113AO15541 343 aaKnown RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms