RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 CFAP45Q9UL16 551 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 KIF28PB7ZC32 967 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 CFAP100Q494V2 611 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 ZFPM1Q8IX07 1006 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 NIM1KQ8IY84 436 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 CCDC82Q8N4S0 544 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 PNMA1Q8ND90 353 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 CTCFLQ8NI51 663 aaPredicted RBP26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 PPP1R1BQ9UD71 204 aaPredicted RBP26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 SWAP70Q9UH65 585 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 FSD2A1L4K1 749 aa26.15■■□□□ 1.78
VCPKMT-205ENST00000569518 CACNB3P54284 484 aa26.15■■□□□ 1.78
VCPKMT-205ENST00000569518 ZSCAN23Q3MJ62 389 aa26.15■■□□□ 1.78
VCPKMT-205ENST00000569518 TAOK3Q9H2K8 898 aa26.15■■□□□ 1.78
VCPKMT-205ENST00000569518 GREB1LQ9C091 1923 aaPredicted RBP26.15■■□□□ 1.78
VCPKMT-205ENST00000569518 ZNF396Q96N95 335 aaPredicted RBP26.14■■□□□ 1.78
VCPKMT-205ENST00000569518 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.14■■□□□ 1.78
VCPKMT-205ENST00000569518 CNTNAP5Q8WYK1 1306 aa26.14■■□□□ 1.77
VCPKMT-205ENST00000569518 NFKBIEO00221 500 aa26.14■■□□□ 1.77
VCPKMT-205ENST00000569518 PRPF3O43395 683 aaKnown RBP26.14■■□□□ 1.77
VCPKMT-205ENST00000569518 TMEM47Q9BQJ4 181 aa26.14■■□□□ 1.77
VCPKMT-205ENST00000569518 HLA-DOAP06340 250 aa26.13■■□□□ 1.77
VCPKMT-205ENST00000569518 SHMT1P34896 483 aa26.13■■□□□ 1.77
VCPKMT-205ENST00000569518 TRIM29Q14134 588 aa26.13■■□□□ 1.77
VCPKMT-205ENST00000569518 PKN1Q16512 942 aa26.13■■□□□ 1.77
VCPKMT-205ENST00000569518 PRMT6Q96LA8 375 aaPredicted RBP26.13■■□□□ 1.77
VCPKMT-205ENST00000569518 USP28Q96RU2 1077 aa26.13■■□□□ 1.77
VCPKMT-205ENST00000569518 DHX36Q9H2U1 1008 aaKnown RBP26.13■■□□□ 1.77
VCPKMT-205ENST00000569518 COL2A1P02458 1487 aaPredicted RBP26.12■■□□□ 1.77
VCPKMT-205ENST00000569518 KIF5BP33176 963 aa26.12■■□□□ 1.77
VCPKMT-205ENST00000569518 ZNF445P59923 1031 aa26.12■■□□□ 1.77
VCPKMT-205ENST00000569518 GRM4Q14833 912 aa26.12■■□□□ 1.77
VCPKMT-205ENST00000569518 SRBD1Q8N5C6 995 aaKnown RBP26.12■■□□□ 1.77
VCPKMT-205ENST00000569518 FTOQ9C0B1 505 aaKnown RBP eCLIP26.12■■□□□ 1.77
VCPKMT-205ENST00000569518 RCOR1Q9UKL0 485 aa26.12■■□□□ 1.77
VCPKMT-205ENST00000569518 ARFGEF1Q9Y6D6 1849 aa26.12■■□□□ 1.77
VCPKMT-205ENST00000569518 IGKV6D-41A0A0C4DH26 115 aa26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 U2AF2P26368 475 aaKnown RBP eCLIP26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 MYSM1Q5VVJ2 828 aa26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 SH3BP5LQ7L8J4 393 aa26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 CEP95Q96GE4 821 aa26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 TDRD3Q9H7E2 651 aaKnown RBP26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 TAOK2Q9UL54 1235 aa26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 STX8Q9UNK0 236 aa26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 SPDYE2BA6NHP3 402 aa26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 SPDYE6P0CI01 402 aa26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 ATRNL1Q5VV63 1379 aa26.11■■□□□ 1.77
VCPKMT-205ENST00000569518 LTBP3Q9NS15 1303 aa26.1■■□□□ 1.77
VCPKMT-205ENST00000569518 DDTLA6NHG4 134 aaPredicted RBP26.1■■□□□ 1.77
VCPKMT-205ENST00000569518 MMP1P03956 469 aa26.1■■□□□ 1.77
VCPKMT-205ENST00000569518 AKR1B1P15121 316 aa26.1■■□□□ 1.77
VCPKMT-205ENST00000569518 CXCL9Q07325 125 aa26.1■■□□□ 1.77
VCPKMT-205ENST00000569518 TCP10Q12799 353 aa26.1■■□□□ 1.77
VCPKMT-205ENST00000569518 AGBL3Q8NEM8 1001 aa26.1■■□□□ 1.77
VCPKMT-205ENST00000569518 DNAJC18Q9H819 358 aa26.1■■□□□ 1.77
VCPKMT-205ENST00000569518 RTEL1Q9NZ71 1219 aa26.1■■□□□ 1.77
VCPKMT-205ENST00000569518 ISY1Q9ULR0 285 aaKnown RBP26.1■■□□□ 1.77
VCPKMT-205ENST00000569518 ENTPD3O75355 529 aa26.09■■□□□ 1.77
VCPKMT-205ENST00000569518 AKAP17AQ02040 695 aaKnown RBP26.09■■□□□ 1.77
VCPKMT-205ENST00000569518 KLHL34Q8N239 644 aa26.09■■□□□ 1.77
VCPKMT-205ENST00000569518 SYAP1Q96A49 352 aaPredicted RBP26.09■■□□□ 1.77
VCPKMT-205ENST00000569518 SHISA4Q96DD7 197 aa26.09■■□□□ 1.77
VCPKMT-205ENST00000569518 PGBD1Q96JS3 809 aa26.09■■□□□ 1.77
VCPKMT-205ENST00000569518 ZBTB12Q9Y330 459 aaPredicted RBP26.09■■□□□ 1.77
VCPKMT-205ENST00000569518 V9GY48 417 aaPredicted RBP26.09■■□□□ 1.77
VCPKMT-205ENST00000569518 TOP1P11387 765 aaKnown RBP26.09■■□□□ 1.77
VCPKMT-205ENST00000569518 MAD2L2Q9UI95 211 aa26.09■■□□□ 1.77
VCPKMT-205ENST00000569518 GAS2L3Q86XJ1 694 aa26.08■■□□□ 1.77
VCPKMT-205ENST00000569518 POLR3EQ9NVU0 708 aa26.08■■□□□ 1.77
VCPKMT-205ENST00000569518 MTMR4Q9NYA4 1195 aa26.08■■□□□ 1.77
VCPKMT-205ENST00000569518 PI4KBQ9UBF8 816 aa26.08■■□□□ 1.77
VCPKMT-205ENST00000569518 HDAC9Q9UKV0 1011 aa26.08■■□□□ 1.77
VCPKMT-205ENST00000569518 BCS1LQ9Y276 419 aa26.08■■□□□ 1.77
VCPKMT-205ENST00000569518 CEBPZQ03701 1054 aaKnown RBP26.07■■□□□ 1.76
VCPKMT-205ENST00000569518 METTL16Q86W50 562 aaKnown RBP26.07■■□□□ 1.76
VCPKMT-205ENST00000569518 KCNJ14Q9UNX9 436 aa26.07■■□□□ 1.76
VCPKMT-205ENST00000569518 GOLGA6L3A6NEY3 463 aa26.07■■□□□ 1.76
VCPKMT-205ENST00000569518 STAG2Q8N3U4 1231 aa26.07■■□□□ 1.76
VCPKMT-205ENST00000569518 OGFOD1Q8N543 542 aa26.07■■□□□ 1.76
VCPKMT-205ENST00000569518 hCG_1642624A0A1W2PR95 340 aa26.06■■□□□ 1.76
VCPKMT-205ENST00000569518 PALM3A6NDB9 673 aaPredicted RBP26.06■■□□□ 1.76
VCPKMT-205ENST00000569518 NASPP49321 788 aaPredicted RBP26.06■■□□□ 1.76
VCPKMT-205ENST00000569518 GNAQP50148 359 aa26.06■■□□□ 1.76
VCPKMT-205ENST00000569518 MTMR14Q8NCE2 650 aa26.06■■□□□ 1.76
VCPKMT-205ENST00000569518 JDP2Q8WYK2 163 aa26.06■■□□□ 1.76
VCPKMT-205ENST00000569518 BAZ2BQ9UIF8 2168 aaKnown RBP26.06■■□□□ 1.76
VCPKMT-205ENST00000569518 DLGAP5Q15398 846 aa26.05■■□□□ 1.76
VCPKMT-205ENST00000569518 DIS3L2Q8IYB7 885 aaKnown RBP26.05■■□□□ 1.76
VCPKMT-205ENST00000569518 NLGN2Q8NFZ4 835 aa26.05■■□□□ 1.76
VCPKMT-205ENST00000569518 FOXP1Q9H334 677 aaPredicted RBP26.05■■□□□ 1.76
VCPKMT-205ENST00000569518 SLURP2P0DP57 97 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 SAFBQ15424 915 aaKnown RBP eCLIP26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 SLC35G1Q2M3R5 365 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 CCDC183Q5T5S1 534 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 CIAPIN1Q6FI81 312 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 NOSTRINQ8IVI9 506 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 CCDC17Q96LX7 622 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 PHF20Q9BVI0 1012 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 CLIC4Q9Y696 253 aa26.04■■□□□ 1.76
VCPKMT-205ENST00000569518 BTBD18B2RXH4 712 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms