RNA–Protein interactions for RNA: ENST00000569418.5

CYLD-214, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-214ENST00000569418 NAV1Q8NEY1 1877 aa15.07■□□□□ 0
CYLD-214ENST00000569418 LRRC47Q8N1G4 583 aaKnown RBP15.07■□□□□ 0
CYLD-214ENST00000569418 AGBL3Q8NEM8 1001 aa15.07■□□□□ 0
CYLD-214ENST00000569418 AIFM3Q96NN9 605 aa15.07■□□□□ 0
CYLD-214ENST00000569418 DDX11L8A8MPP1 907 aa15.07■□□□□ 0
CYLD-214ENST00000569418 AKR1B1P15121 316 aa15.07■□□□□ 0
CYLD-214ENST00000569418 MTA3Q9BTC8 594 aa15.07■□□□□ 0
CYLD-214ENST00000569418 FAM217BQ9NTX9 383 aaPredicted RBP15.07■□□□□ 0
CYLD-214ENST00000569418 CDKL5O76039 1030 aa15.06■□□□□ 0
CYLD-214ENST00000569418 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
CYLD-214ENST00000569418 ROBO3Q96MS0 1386 aa15.06■□□□□ 0
CYLD-214ENST00000569418 MYH1P12882 1939 aa15.06■□□□□ 0
CYLD-214ENST00000569418 PRPF40AO75400 957 aaKnown RBP15.06■□□□□ 0
CYLD-214ENST00000569418 RASA3Q14644 834 aa15.06■□□□□ 0
CYLD-214ENST00000569418 ANGEL2Q5VTE6 544 aaKnown RBP15.06■□□□□ 0
CYLD-214ENST00000569418 TRPM4Q8TD43 1214 aa15.06■□□□□ 0
CYLD-214ENST00000569418 CLIP2Q9UDT6 1046 aa15.06■□□□□ 0
CYLD-214ENST00000569418 KIF4BQ2VIQ3 1234 aa15.06■□□□□ 0
CYLD-214ENST00000569418 RCSD1Q6JBY9 416 aa15.06■□□□□ 0
CYLD-214ENST00000569418 C8orf76Q96K31 380 aa15.06■□□□□ 0
CYLD-214ENST00000569418 IDI2Q9BXS1 227 aa15.06■□□□□ 0
CYLD-214ENST00000569418 CEBPZQ03701 1054 aaKnown RBP15.05■□□□□ 0
CYLD-214ENST00000569418 SH3BP5LQ7L8J4 393 aa15.05■□□□□ 0
CYLD-214ENST00000569418 CTCFLQ8NI51 663 aaPredicted RBP15.05■□□□□ 0
CYLD-214ENST00000569418 CCDC196A0A1B0GTZ2 297 aa15.05■□□□□ -0
CYLD-214ENST00000569418 LMOD1P29536 600 aaPredicted RBP15.05■□□□□ -0
CYLD-214ENST00000569418 PNMA1Q8ND90 353 aa15.05■□□□□ -0
CYLD-214ENST00000569418 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.05■□□□□ -0
CYLD-214ENST00000569418 FIBPO43427 364 aa15.05■□□□□ -0
CYLD-214ENST00000569418 SSRP1Q08945 709 aaKnown RBP15.05■□□□□ -0
CYLD-214ENST00000569418 TROAPQ12815 778 aa15.05■□□□□ -0
CYLD-214ENST00000569418 DPY19L2Q6NUT2 758 aa15.05■□□□□ -0
CYLD-214ENST00000569418 CEP95Q96GE4 821 aa15.05■□□□□ -0
CYLD-214ENST00000569418 ALG1Q9BT22 464 aa15.05■□□□□ -0
CYLD-214ENST00000569418 GZF1Q9H116 711 aaPredicted RBP15.05■□□□□ -0
CYLD-214ENST00000569418 PI4KBQ9UBF8 816 aa15.05■□□□□ -0
CYLD-214ENST00000569418 HACL1Q9UJ83 578 aa15.05■□□□□ -0
CYLD-214ENST00000569418 BRCA1P38398 1863 aaKnown RBP15.05■□□□□ -0
CYLD-214ENST00000569418 CDK5RAP2Q96SN8 1893 aa15.05■□□□□ -0
CYLD-214ENST00000569418 DNM1Q05193 864 aaKnown RBP15.04■□□□□ -0
CYLD-214ENST00000569418 NTRK3Q16288 839 aa15.04■□□□□ -0
CYLD-214ENST00000569418 TRIM22Q8IYM9 498 aa15.04■□□□□ -0
CYLD-214ENST00000569418 DHX36Q9H2U1 1008 aaKnown RBP15.04■□□□□ -0
CYLD-214ENST00000569418 CNPY2Q9Y2B0 182 aa15.04■□□□□ -0
CYLD-214ENST00000569418 ATP6V1DQ9Y5K8 247 aa15.04■□□□□ -0
CYLD-214ENST00000569418 FER1L6Q2WGJ9 1857 aa15.04■□□□□ -0
CYLD-214ENST00000569418 FZD9O00144 591 aa15.04■□□□□ -0
CYLD-214ENST00000569418 PLEKHA8P1O95397 391 aa15.04■□□□□ -0
CYLD-214ENST00000569418 GABPAQ06546 454 aa15.04■□□□□ -0
CYLD-214ENST00000569418 CERKLQ49MI3 558 aaPredicted RBP15.04■□□□□ -0
CYLD-214ENST00000569418 NEDD1Q8NHV4 660 aa15.04■□□□□ -0
CYLD-214ENST00000569418 AKAP17AQ02040 695 aaKnown RBP15.04■□□□□ -0
CYLD-214ENST00000569418 DGKHQ86XP1 1220 aa15.04■□□□□ -0
CYLD-214ENST00000569418 TMEM47Q9BQJ4 181 aa15.04■□□□□ -0
CYLD-214ENST00000569418 LAMB1P07942 1786 aa15.04■□□□□ -0
CYLD-214ENST00000569418 LTBP3Q9NS15 1303 aa15.03■□□□□ -0
CYLD-214ENST00000569418 SHMT1P34896 483 aa15.03■□□□□ -0
CYLD-214ENST00000569418 HOMER1Q86YM7 354 aa15.03■□□□□ -0
CYLD-214ENST00000569418 SPICE1Q8N0Z3 855 aa15.03■□□□□ -0
CYLD-214ENST00000569418 ZNF408Q9H9D4 720 aa15.03■□□□□ -0
CYLD-214ENST00000569418 TRAK2O60296 914 aa15.03■□□□□ -0
CYLD-214ENST00000569418 ATP2B1P20020 1258 aa15.03■□□□□ -0
CYLD-214ENST00000569418 IKQ13123 557 aaPredicted RBP15.03■□□□□ -0
CYLD-214ENST00000569418 GGA3Q9NZ52 723 aa15.03■□□□□ -0
CYLD-214ENST00000569418 TFIP11Q9UBB9 837 aaKnown RBP15.03■□□□□ -0
CYLD-214ENST00000569418 FRMPD2Q68DX3 1309 aaPredicted RBP15.03■□□□□ -0
CYLD-214ENST00000569418 IFNAR1P17181 557 aa15.03■□□□□ -0
CYLD-214ENST00000569418 GUCY1A2P33402 732 aa15.03■□□□□ -0
CYLD-214ENST00000569418 DNAJC18Q9H819 358 aa15.03■□□□□ -0
CYLD-214ENST00000569418 SWAP70Q9UH65 585 aa15.03■□□□□ -0
CYLD-214ENST00000569418 SOCS7O14512 581 aa15.02■□□□□ -0
CYLD-214ENST00000569418 GH2P01242 217 aa15.02■□□□□ -0
CYLD-214ENST00000569418 CALM1P0DP23 149 aa15.02■□□□□ -0
CYLD-214ENST00000569418 CALM2P0DP24 149 aa15.02■□□□□ -0
CYLD-214ENST00000569418 CALM3P0DP25 149 aa15.02■□□□□ -0
CYLD-214ENST00000569418 SEPT2Q15019 361 aa15.02■□□□□ -0
CYLD-214ENST00000569418 USP17L2Q6R6M4 530 aa15.02■□□□□ -0
CYLD-214ENST00000569418 UBA5Q9GZZ9 404 aa15.02■□□□□ -0
CYLD-214ENST00000569418 GPCPD1Q9NPB8 672 aa15.02■□□□□ -0
CYLD-214ENST00000569418 ENTPD3O75355 529 aa15.02□□□□□ -0.01
CYLD-214ENST00000569418 DEFB129Q9H1M3 183 aa15.02□□□□□ -0.01
CYLD-214ENST00000569418 DDX49Q9Y6V7 483 aaKnown RBP15.02□□□□□ -0.01
CYLD-214ENST00000569418 DDAH1O94760 285 aa15.01□□□□□ -0.01
CYLD-214ENST00000569418 SPDYE2Q495Y8 402 aa15.01□□□□□ -0.01
CYLD-214ENST00000569418 CCDC178Q5BJE1 867 aa15.01□□□□□ -0.01
CYLD-214ENST00000569418 V9GY48 417 aaPredicted RBP15.01□□□□□ -0.01
CYLD-214ENST00000569418 GNL2Q13823 731 aaKnown RBP15.01□□□□□ -0.01
CYLD-214ENST00000569418 TRIM29Q14134 588 aa15.01□□□□□ -0.01
CYLD-214ENST00000569418 NBPF12Q5TAG4 269 aaPredicted RBP15.01□□□□□ -0.01
CYLD-214ENST00000569418 CLEC17AQ6ZS10 378 aa15.01□□□□□ -0.01
CYLD-214ENST00000569418 PDIA4P13667 645 aaKnown RBP15.01□□□□□ -0.01
CYLD-214ENST00000569418 TTLL12Q14166 644 aaPredicted RBP15.01□□□□□ -0.01
CYLD-214ENST00000569418 CCDC96Q2M329 555 aa15.01□□□□□ -0.01
CYLD-214ENST00000569418 STAG2Q8N3U4 1231 aa15.01□□□□□ -0.01
CYLD-214ENST00000569418 FBXO18Q8NFZ0 1043 aa15.01□□□□□ -0.01
CYLD-214ENST00000569418 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.01□□□□□ -0.01
CYLD-214ENST00000569418 GPRC5DQ9NZD1 345 aa15.01□□□□□ -0.01
CYLD-214ENST00000569418 FMNL1O95466 1100 aaPredicted RBP15□□□□□ -0.01
CYLD-214ENST00000569418 FOXP4Q8IVH2 680 aaPredicted RBP15□□□□□ -0.01
CYLD-214ENST00000569418 HIRAP54198 1017 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms