RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CEP290O15078 2479 aa18.93■□□□□ 0.62
USB1-215ENST00000569252 CDK5RAP2Q96SN8 1893 aa18.93■□□□□ 0.62
USB1-215ENST00000569252 TSPY2A6NKD2 308 aa18.93■□□□□ 0.62
USB1-215ENST00000569252 PRDM1O75626 825 aa18.93■□□□□ 0.62
USB1-215ENST00000569252 ALDH1A1P00352 501 aa18.93■□□□□ 0.62
USB1-215ENST00000569252 SHMT1P34896 483 aa18.93■□□□□ 0.62
USB1-215ENST00000569252 HSPA4P34932 840 aa18.93■□□□□ 0.62
USB1-215ENST00000569252 HABP4Q5JVS0 413 aaKnown RBP18.93■□□□□ 0.62
USB1-215ENST00000569252 BAZ2AQ9UIF9 1905 aaKnown RBP18.92■□□□□ 0.62
USB1-215ENST00000569252 PHF20L1A8MW92 1017 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 ASNSP08243 561 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 CAP2P40123 477 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 TFAP4Q01664 338 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 PPP4R3BQ5MIZ7 849 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 SLC44A5Q8NCS7 719 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.92■□□□□ 0.62
USB1-215ENST00000569252 NCOA7Q8NI08 942 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 BRI3BPQ8WY22 251 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 ZKSCAN4Q969J2 545 aaPredicted RBP18.92■□□□□ 0.62
USB1-215ENST00000569252 BACH2Q9BYV9 841 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 ARHGAP39Q9C0H5 1083 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 EFCC1Q9HA90 598 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 ROBO3Q96MS0 1386 aa18.92■□□□□ 0.62
USB1-215ENST00000569252 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
USB1-215ENST00000569252 E7EWF7 191 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 ORC4O43929 436 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 GDF11O95390 407 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 SEC24BO95487 1268 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 SLURP2P0DP57 97 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 PSMA5P28066 241 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 EVX2Q03828 476 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 RAB3GAP1Q15042 981 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.91■□□□□ 0.62
USB1-215ENST00000569252 SCYL3Q8IZE3 742 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 FAM43AQ8N2R8 423 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 ERO1AQ96HE7 468 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 MS4A4AQ96JQ5 239 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 PTCH2Q9Y6C5 1203 aa18.91■□□□□ 0.62
USB1-215ENST00000569252 SMIM22K7EJ46 135 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 GH2P01242 217 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 HMGB1P09429 215 aaKnown RBP18.9■□□□□ 0.62
USB1-215ENST00000569252 FGRP09769 529 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 INPP5BP32019 993 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 SP3Q02447 781 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 VGLL4Q14135 290 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 CCDC178Q5BJE1 867 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 TMEM179Q6ZVK1 233 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 IQCA1Q86XH1 822 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 TBC1D10CQ8IV04 446 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 DNAJC18Q9H819 358 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 AS3MTQ9HBK9 375 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 INCENPQ9NQS7 918 aa18.9■□□□□ 0.62
USB1-215ENST00000569252 RASA1P20936 1047 aa18.89■□□□□ 0.61
USB1-215ENST00000569252 TSGA10IPQ3SY00 556 aa18.89■□□□□ 0.61
USB1-215ENST00000569252 FAM47AQ5JRC9 791 aa18.89■□□□□ 0.61
USB1-215ENST00000569252 NOL9Q5SY16 702 aaKnown RBP18.89■□□□□ 0.61
USB1-215ENST00000569252 OTUD5Q96G74 571 aa18.89■□□□□ 0.61
USB1-215ENST00000569252 NEK1Q96PY6 1258 aa18.89■□□□□ 0.61
USB1-215ENST00000569252 TBC1D2Q9BYX2 928 aa18.89■□□□□ 0.61
USB1-215ENST00000569252 C22orf23Q9BZE7 217 aa18.89■□□□□ 0.61
USB1-215ENST00000569252 TRIOBPQ9H2D6 2365 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 CCL15-CCL14A0A0B4J2E2 113 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 ERICH2A1L162 156 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 USP17L5A8MUK1 530 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 B4E1Z4 1266 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 AKR1B1P15121 316 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 INHBEP58166 350 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 SART3Q15020 963 aaKnown RBP18.88■□□□□ 0.61
USB1-215ENST00000569252 CCL15Q16663 113 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 ARMC5Q96C12 935 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 UBAC1Q9BSL1 405 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 KANSL2Q9H9L4 492 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.88■□□□□ 0.61
USB1-215ENST00000569252 SZT2Q5T011 3432 aa18.88■□□□□ 0.61
USB1-215ENST00000569252 TESPA1A2RU30 521 aaPredicted RBP18.87■□□□□ 0.61
USB1-215ENST00000569252 KDM4AO75164 1064 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 MCM5P33992 734 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 ANAPC15P60006 121 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 ATP2B2Q01814 1243 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 TAF1CQ15572 869 aaPredicted RBP18.87■□□□□ 0.61
USB1-215ENST00000569252 ERO1BQ86YB8 467 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 NEDD1Q8NHV4 660 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 SH3TC2Q8TF17 1288 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 NBPF3Q9H094 633 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 ARHGEF10LQ9HCE6 1279 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 ZBTB21Q9ULJ3 1066 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 SNX14Q9Y5W7 946 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 ZHX2Q9Y6X8 837 aa18.87■□□□□ 0.61
USB1-215ENST00000569252 PTPRAP18433 802 aa18.86■□□□□ 0.61
USB1-215ENST00000569252 FGD1P98174 961 aa18.86■□□□□ 0.61
USB1-215ENST00000569252 PPATQ06203 517 aa18.86■□□□□ 0.61
USB1-215ENST00000569252 RASEFQ8IZ41 740 aa18.86■□□□□ 0.61
USB1-215ENST00000569252 KCNB2Q92953 911 aa18.86■□□□□ 0.61
USB1-215ENST00000569252 ZNF333Q96JL9 665 aa18.86■□□□□ 0.61
USB1-215ENST00000569252 JAKMIP1Q96N16 626 aaKnown RBP18.86■□□□□ 0.61
USB1-215ENST00000569252 SH2D4AQ9H788 454 aa18.86■□□□□ 0.61
USB1-215ENST00000569252 ZSWIM5Q9P217 1185 aa18.86■□□□□ 0.61
USB1-215ENST00000569252 NEDD4P46934 1319 aa18.85■□□□□ 0.61
USB1-215ENST00000569252 RRP1BQ14684 758 aaKnown RBP18.85■□□□□ 0.61
USB1-215ENST00000569252 SEPT2Q15019 361 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms