RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 LRRC24Q50LG9 513 aa14.12□□□□□ -0.15
CDH3-208ENST00000569036 FAM47AQ5JRC9 791 aa14.12□□□□□ -0.15
CDH3-208ENST00000569036 WDR78Q5VTH9 848 aa14.12□□□□□ -0.15
CDH3-208ENST00000569036 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
CDH3-208ENST00000569036 ZNF236Q9UL36 1845 aa14.12□□□□□ -0.15
CDH3-208ENST00000569036 A0A0G2JMZ2 1700 aa14.12□□□□□ -0.15
CDH3-208ENST00000569036 SPTBN4Q9H254 2564 aa14.12□□□□□ -0.15
CDH3-208ENST00000569036 GAKO14976 1311 aa14.12□□□□□ -0.15
CDH3-208ENST00000569036 PPIGQ13427 754 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDH3-208ENST00000569036 CCDC174Q6PII3 467 aa14.11□□□□□ -0.15
CDH3-208ENST00000569036 CACNA1FO60840 1977 aa14.11□□□□□ -0.15
CDH3-208ENST00000569036 GRM8O00222 908 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 FGFR2P21802 821 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 CCNA1P78396 465 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 CALD1Q05682 793 aaKnown RBP14.1□□□□□ -0.15
CDH3-208ENST00000569036 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
CDH3-208ENST00000569036 MFSD5Q6N075 450 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 ZNF365Q70YC5 407 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 ANKRD33Q7Z3H0 272 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 TBX21Q9UL17 535 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 RABGAP1Q9Y3P9 1069 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 MTCH2Q9Y6C9 303 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 SMCHD1A6NHR9 2005 aa14.1□□□□□ -0.15
CDH3-208ENST00000569036 A0A1W2PQ45 241 aaPredicted RBP14.09□□□□□ -0.15
CDH3-208ENST00000569036 A0A1W2PQY0 241 aa14.09□□□□□ -0.15
CDH3-208ENST00000569036 ST18O60284 1047 aa14.09□□□□□ -0.15
CDH3-208ENST00000569036 IFIT1P09914 478 aaKnown RBP14.09□□□□□ -0.15
CDH3-208ENST00000569036 ACRP10323 421 aa14.09□□□□□ -0.15
CDH3-208ENST00000569036 PUM3Q15397 648 aaKnown RBP14.09□□□□□ -0.15
CDH3-208ENST00000569036 BEND3Q5T5X7 828 aa14.09□□□□□ -0.15
CDH3-208ENST00000569036 OLFML2BQ68BL8 750 aa14.09□□□□□ -0.15
CDH3-208ENST00000569036 PSRC1Q6PGN9 363 aaPredicted RBP14.09□□□□□ -0.15
CDH3-208ENST00000569036 TOX2Q96NM4 488 aa14.09□□□□□ -0.15
CDH3-208ENST00000569036 IVNS1ABPQ9Y6Y0 642 aa14.09□□□□□ -0.15
CDH3-208ENST00000569036 DCDC2CA8MYV0 355 aa14.08□□□□□ -0.16
CDH3-208ENST00000569036 CSF2RAP15509 400 aa14.08□□□□□ -0.16
CDH3-208ENST00000569036 POU3F3P20264 500 aaPredicted RBP14.08□□□□□ -0.16
CDH3-208ENST00000569036 CSPP1Q1MSJ5 1256 aa14.08□□□□□ -0.16
CDH3-208ENST00000569036 PPP2R2DQ66LE6 453 aa14.08□□□□□ -0.16
CDH3-208ENST00000569036 HLA-CQ95604 372 aa14.08□□□□□ -0.16
CDH3-208ENST00000569036 ZNF521Q96K83 1311 aa14.08□□□□□ -0.16
CDH3-208ENST00000569036 SALL1Q9NSC2 1324 aa14.08□□□□□ -0.16
CDH3-208ENST00000569036 SIPA1L1O43166 1804 aa14.08□□□□□ -0.16
CDH3-208ENST00000569036 TRIOO75962 3097 aa14.07□□□□□ -0.16
CDH3-208ENST00000569036 C19orf81C9J6K1 198 aa14.07□□□□□ -0.16
CDH3-208ENST00000569036 PRAMEF19Q5SWL8 479 aa14.07□□□□□ -0.16
CDH3-208ENST00000569036 KAZALD1Q96I82 304 aa14.07□□□□□ -0.16
CDH3-208ENST00000569036 USP17L10C9JJH3 530 aa14.06□□□□□ -0.16
CDH3-208ENST00000569036 F6X3S4 739 aa14.06□□□□□ -0.16
CDH3-208ENST00000569036 RFXAPO00287 272 aa14.06□□□□□ -0.16
CDH3-208ENST00000569036 GTPBP6O43824 516 aaPredicted RBP14.06□□□□□ -0.16
CDH3-208ENST00000569036 BTDP43251 543 aa14.06□□□□□ -0.16
CDH3-208ENST00000569036 RABGGTBP53611 331 aa14.06□□□□□ -0.16
CDH3-208ENST00000569036 JAG1P78504 1218 aa14.06□□□□□ -0.16
CDH3-208ENST00000569036 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
CDH3-208ENST00000569036 SUCLG2Q96I99 432 aa14.06□□□□□ -0.16
CDH3-208ENST00000569036 XPNPEP3Q9NQH7 507 aa14.06□□□□□ -0.16
CDH3-208ENST00000569036 PGK1P00558 417 aa14.05□□□□□ -0.16
CDH3-208ENST00000569036 SLC5A1P13866 664 aa14.05□□□□□ -0.16
CDH3-208ENST00000569036 MYOGP15173 224 aa14.05□□□□□ -0.16
CDH3-208ENST00000569036 RHBDL3P58872 404 aa14.05□□□□□ -0.16
CDH3-208ENST00000569036 TWISTNBQ3B726 338 aaPredicted RBP14.05□□□□□ -0.16
CDH3-208ENST00000569036 KRT40Q6A162 431 aa14.05□□□□□ -0.16
CDH3-208ENST00000569036 RNF180Q86T96 592 aa14.05□□□□□ -0.16
CDH3-208ENST00000569036 DPP9Q86TI2 863 aa14.05□□□□□ -0.16
CDH3-208ENST00000569036 TMEM199Q8N511 208 aa14.05□□□□□ -0.16
CDH3-208ENST00000569036 EMILIN3Q9NT22 766 aa14.05□□□□□ -0.16
CDH3-208ENST00000569036 BTBD7Q9P203 1132 aa14.05□□□□□ -0.16
CDH3-208ENST00000569036 APBB1O00213 710 aa14.04□□□□□ -0.16
CDH3-208ENST00000569036 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
CDH3-208ENST00000569036 ASNSP08243 561 aa14.04□□□□□ -0.16
CDH3-208ENST00000569036 ADORA2AP29274 412 aa14.04□□□□□ -0.16
CDH3-208ENST00000569036 WDR43Q15061 677 aaKnown RBP eCLIP14.04□□□□□ -0.16
CDH3-208ENST00000569036 SHROOM1Q2M3G4 852 aaPredicted RBP14.04□□□□□ -0.16
CDH3-208ENST00000569036 DZIP1Q86YF9 867 aaKnown RBP14.04□□□□□ -0.16
CDH3-208ENST00000569036 MTIF3Q9H2K0 278 aaKnown RBP14.04□□□□□ -0.16
CDH3-208ENST00000569036 C9orf78Q9NZ63 289 aaPredicted RBP14.04□□□□□ -0.16
CDH3-208ENST00000569036 DCHS1Q96JQ0 3298 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 RARBP10826 455 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 ALADP13716 330 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 GJD3Q8N144 294 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 KLHDC4Q8TBB5 520 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 LPIN2Q92539 896 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 ANKS1AQ92625 1134 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 FAM163AQ96GL9 167 aaPredicted RBP14.03□□□□□ -0.16
CDH3-208ENST00000569036 IL23AQ9NPF7 189 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 STARD7Q9NQZ5 370 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 HERC5Q9UII4 1024 aaKnown RBP14.03□□□□□ -0.16
CDH3-208ENST00000569036 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 PCDHA11Q9Y5I1 949 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 MROH7-TTC4A0A0A0MT08 1334 aa14.03□□□□□ -0.16
CDH3-208ENST00000569036 EPOPA6NHQ4 379 aa14.02□□□□□ -0.17
CDH3-208ENST00000569036 COBLO75128 1261 aa14.02□□□□□ -0.17
CDH3-208ENST00000569036 USP17L2Q6R6M4 530 aa14.02□□□□□ -0.17
CDH3-208ENST00000569036 FAM178BQ8IXR5 827 aa14.02□□□□□ -0.17
CDH3-208ENST00000569036 PPP1R12CQ9BZL4 782 aa14.02□□□□□ -0.17
CDH3-208ENST00000569036 CACNA1BQ00975 2339 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 ROBO3Q96MS0 1386 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 USP17L15C9J2P7 530 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms