RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 APBA2Q99767 749 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 UBE2OQ9C0C9 1292 aaKnown RBP18.75■□□□□ 0.59
PKD1-236ENST00000568796 SERPINB13Q9UIV8 391 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 CDK5RAP2Q96SN8 1893 aa18.75■□□□□ 0.59
PKD1-236ENST00000568796 MYO5AQ9Y4I1 1855 aaKnown RBP18.75■□□□□ 0.59
PKD1-236ENST00000568796 DLL1O00548 723 aa18.74■□□□□ 0.59
PKD1-236ENST00000568796 GLRX3O76003 335 aaKnown RBP18.74■□□□□ 0.59
PKD1-236ENST00000568796 USP14P54578 494 aa18.74■□□□□ 0.59
PKD1-236ENST00000568796 CERKLQ49MI3 558 aaPredicted RBP18.74■□□□□ 0.59
PKD1-236ENST00000568796 EAF2Q96CJ1 260 aaPredicted RBP18.74■□□□□ 0.59
PKD1-236ENST00000568796 EDC3Q96F86 508 aaKnown RBP18.74■□□□□ 0.59
PKD1-236ENST00000568796 NOP58Q9Y2X3 529 aaKnown RBP18.74■□□□□ 0.59
PKD1-236ENST00000568796 RABGAP1Q9Y3P9 1069 aa18.74■□□□□ 0.59
PKD1-236ENST00000568796 MAP3K12Q12852 859 aa18.73■□□□□ 0.59
PKD1-236ENST00000568796 MAP2K5Q13163 448 aa18.73■□□□□ 0.59
PKD1-236ENST00000568796 ABCB5Q2M3G0 1257 aa18.73■□□□□ 0.59
PKD1-236ENST00000568796 MFSD14CQ5VZR4 134 aa18.73■□□□□ 0.59
PKD1-236ENST00000568796 POTEEQ6S8J3 1075 aa18.73■□□□□ 0.59
PKD1-236ENST00000568796 TTC6Q86TZ1 520 aa18.73■□□□□ 0.59
PKD1-236ENST00000568796 CERS3Q8IU89 383 aa18.73■□□□□ 0.59
PKD1-236ENST00000568796 TDHQ8IZJ6 230 aa18.73■□□□□ 0.59
PKD1-236ENST00000568796 DEFB123Q8N688 67 aa18.73■□□□□ 0.59
PKD1-236ENST00000568796 CABP5Q9NP86 173 aa18.73■□□□□ 0.59
PKD1-236ENST00000568796 FOCADQ5VW36 1801 aa18.72■□□□□ 0.59
PKD1-236ENST00000568796 LHX8Q68G74 356 aa18.72■□□□□ 0.59
PKD1-236ENST00000568796 TATDN1Q6P1N9 297 aa18.72■□□□□ 0.59
PKD1-236ENST00000568796 Q7L0L9 218 aa18.72■□□□□ 0.59
PKD1-236ENST00000568796 ACER1Q8TDN7 264 aa18.72■□□□□ 0.59
PKD1-236ENST00000568796 C12orf42Q96LP6 360 aa18.72■□□□□ 0.59
PKD1-236ENST00000568796 ANTXR1Q9H6X2 564 aa18.72■□□□□ 0.59
PKD1-236ENST00000568796 IVNS1ABPQ9Y6Y0 642 aa18.72■□□□□ 0.59
PKD1-236ENST00000568796 MYH1P12882 1939 aa18.71■□□□□ 0.59
PKD1-236ENST00000568796 CNMDO75829 334 aa18.71■□□□□ 0.59
PKD1-236ENST00000568796 POLR3DP05423 398 aaPredicted RBP18.71■□□□□ 0.59
PKD1-236ENST00000568796 VCAM1P19320 739 aa18.71■□□□□ 0.59
PKD1-236ENST00000568796 CNGA1P29973 690 aa18.71■□□□□ 0.59
PKD1-236ENST00000568796 MDM2Q00987 491 aaPredicted RBP18.71■□□□□ 0.59
PKD1-236ENST00000568796 LRRC26Q2I0M4 334 aa18.71■□□□□ 0.59
PKD1-236ENST00000568796 CATSPERGQ6ZRH7 1159 aa18.71■□□□□ 0.59
PKD1-236ENST00000568796 EHD4Q9H223 541 aa18.71■□□□□ 0.59
PKD1-236ENST00000568796 COL6A1P12109 1028 aa18.7■□□□□ 0.58
PKD1-236ENST00000568796 PTPREP23469 700 aa18.7■□□□□ 0.58
PKD1-236ENST00000568796 ATP2B2Q01814 1243 aa18.7■□□□□ 0.58
PKD1-236ENST00000568796 LRIT3Q3SXY7 679 aa18.7■□□□□ 0.58
PKD1-236ENST00000568796 GPR153Q6NV75 609 aa18.7■□□□□ 0.58
PKD1-236ENST00000568796 AACSQ86V21 672 aa18.7■□□□□ 0.58
PKD1-236ENST00000568796 SENP6Q9GZR1 1112 aaPredicted RBP18.7■□□□□ 0.58
PKD1-236ENST00000568796 KIAA1683Q9H0B3 1180 aa18.7■□□□□ 0.58
PKD1-236ENST00000568796 RPAP3Q9H6T3 665 aaPredicted RBP18.7■□□□□ 0.58
PKD1-236ENST00000568796 SLC15A5A6NIM6 579 aa18.69■□□□□ 0.58
PKD1-236ENST00000568796 MPHOSPH10O00566 681 aaKnown RBP18.69■□□□□ 0.58
PKD1-236ENST00000568796 PLCD1P51178 756 aa18.69■□□□□ 0.58
PKD1-236ENST00000568796 FLRT1Q9NZU1 646 aa18.69■□□□□ 0.58
PKD1-236ENST00000568796 BTBD7Q9P203 1132 aa18.69■□□□□ 0.58
PKD1-236ENST00000568796 EXOC6BQ9Y2D4 811 aa18.69■□□□□ 0.58
PKD1-236ENST00000568796 MAGEB6P1A0A0J9YX57 407 aa18.68■□□□□ 0.58
PKD1-236ENST00000568796 RLBP1P12271 317 aa18.68■□□□□ 0.58
PKD1-236ENST00000568796 SHMT1P34896 483 aa18.68■□□□□ 0.58
PKD1-236ENST00000568796 BCL11AQ9H165 835 aa18.68■□□□□ 0.58
PKD1-236ENST00000568796 DDX20Q9UHI6 824 aaKnown RBP18.68■□□□□ 0.58
PKD1-236ENST00000568796 COL6A3P12111 3177 aa18.67■□□□□ 0.58
PKD1-236ENST00000568796 ATN1P54259 1190 aaPredicted RBP18.67■□□□□ 0.58
PKD1-236ENST00000568796 SEPT2Q15019 361 aa18.67■□□□□ 0.58
PKD1-236ENST00000568796 CEP85Q6P2H3 762 aa18.67■□□□□ 0.58
PKD1-236ENST00000568796 ERC1Q8IUD2 1116 aa18.67■□□□□ 0.58
PKD1-236ENST00000568796 SPDYE16A6NNV3 312 aaPredicted RBP18.66■□□□□ 0.58
PKD1-236ENST00000568796 CYP2C19P33261 490 aa18.66■□□□□ 0.58
PKD1-236ENST00000568796 GRB14Q14449 540 aa18.66■□□□□ 0.58
PKD1-236ENST00000568796 DPP9Q86TI2 863 aa18.66■□□□□ 0.58
PKD1-236ENST00000568796 NPLOC4Q8TAT6 608 aa18.66■□□□□ 0.58
PKD1-236ENST00000568796 LBHD1Q9BQE6 289 aaPredicted RBP18.66■□□□□ 0.58
PKD1-236ENST00000568796 RIOK1Q9BRS2 568 aaKnown RBP18.66■□□□□ 0.58
PKD1-236ENST00000568796 CRNKL1Q9BZJ0 848 aaKnown RBP18.66■□□□□ 0.58
PKD1-236ENST00000568796 TANGO6Q9C0B7 1094 aa18.66■□□□□ 0.58
PKD1-236ENST00000568796 IL1RAPL2Q9NP60 686 aa18.66■□□□□ 0.58
PKD1-236ENST00000568796 MCM9Q9NXL9 1143 aa18.66■□□□□ 0.58
PKD1-236ENST00000568796 MSCO60682 206 aa18.65■□□□□ 0.58
PKD1-236ENST00000568796 GUCY1A2P33402 732 aa18.65■□□□□ 0.58
PKD1-236ENST00000568796 TTF1Q15361 905 aaPredicted RBP18.65■□□□□ 0.58
PKD1-236ENST00000568796 SLC9C2Q5TAH2 1124 aa18.65■□□□□ 0.58
PKD1-236ENST00000568796 TMED8Q6PL24 325 aaPredicted RBP18.65■□□□□ 0.58
PKD1-236ENST00000568796 LBX2Q6XYB7 198 aa18.65■□□□□ 0.58
PKD1-236ENST00000568796 APBB1O00213 710 aa18.64■□□□□ 0.57
PKD1-236ENST00000568796 HOXC6P09630 235 aa18.64■□□□□ 0.57
PKD1-236ENST00000568796 PDE6AP16499 860 aa18.64■□□□□ 0.57
PKD1-236ENST00000568796 HNRNPUQ00839 825 aaKnown RBP eCLIP18.64■□□□□ 0.57
PKD1-236ENST00000568796 LPAR1Q92633 364 aa18.64■□□□□ 0.57
PKD1-236ENST00000568796 DNAJC2Q99543 621 aaKnown RBP18.64■□□□□ 0.57
PKD1-236ENST00000568796 MTMR10Q9NXD2 777 aa18.64■□□□□ 0.57
PKD1-236ENST00000568796 HOXC10Q9NYD6 342 aa18.64■□□□□ 0.57
PKD1-236ENST00000568796 PRKAG2Q9UGJ0 569 aa18.64■□□□□ 0.57
PKD1-236ENST00000568796 STXBP5LQ9Y2K9 1186 aa18.64■□□□□ 0.57
PKD1-236ENST00000568796 MYCNP04198 464 aaPredicted RBP18.63■□□□□ 0.57
PKD1-236ENST00000568796 PLS1Q14651 629 aa18.63■□□□□ 0.57
PKD1-236ENST00000568796 COG2Q14746 738 aa18.63■□□□□ 0.57
PKD1-236ENST00000568796 HSP90AB4PQ58FF6 505 aa18.63■□□□□ 0.57
PKD1-236ENST00000568796 SAMD1Q6SPF0 538 aaPredicted RBP18.63■□□□□ 0.57
PKD1-236ENST00000568796 SDR42E1Q8WUS8 393 aa18.63■□□□□ 0.57
PKD1-236ENST00000568796 MOV10L1Q9BXT6 1211 aaKnown RBP18.63■□□□□ 0.57
PKD1-236ENST00000568796 A0A1W2PRG0 241 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms