RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	TDO2	P48775	406 aa		12.41	□□□□□ -0.42
UBR1-207	ENST00000568782	USP17L24	Q0WX57	530 aa		12.41	□□□□□ -0.42
UBR1-207	ENST00000568782	C12orf60	Q5U649	245 aa		12.41	□□□□□ -0.42
UBR1-207	ENST00000568782	ARMC5	Q96C12	935 aa		12.41	□□□□□ -0.42
UBR1-207	ENST00000568782	EVI5L	Q96CN4	794 aa		12.41	□□□□□ -0.42
UBR1-207	ENST00000568782	DOCK3	Q8IZD9	2030 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	DDX60L	Q5H9U9	1706 aa	Known RBP	12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	TRIM6-TRIM34	B2RNG4	842 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	GPAA1	O43292	621 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	GRK4	P32298	578 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	HERVK_113	P62684	666 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	CCNA1	P78396	465 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	GABPA	Q06546	454 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	SEPT2	Q15019	361 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	SLFNL1	Q499Z3	407 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	B4GALNT3	Q6L9W6	998 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	SLAIN1	Q8ND83	568 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	GPRC5A	Q8NFJ5	357 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	STRBP	Q96SI9	672 aa	Known RBP	12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	KIAA1683	Q9H0B3	1180 aa		12.4	□□□□□ -0.42
UBR1-207	ENST00000568782	ZSWIM8	A7E2V4	1837 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	PATL2	C9JE40	543 aa	Known RBP	12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	CDK8	P49336	464 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	JAG1	P78504	1218 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	ATP2B2	Q01814	1243 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	CTR9	Q6PD62	1173 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	C16orf86	Q6ZW13	317 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	EXOC6	Q8TAG9	804 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	PI4K2B	Q8TCG2	481 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	DYNLL2	Q96FJ2	89 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	C12orf42	Q96LP6	360 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	P2RX7	Q99572	595 aa	Known RBP	12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	LNPK	Q9C0E8	428 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	NAPB	Q9H115	298 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	EMILIN3	Q9NT22	766 aa		12.39	□□□□□ -0.43
UBR1-207	ENST00000568782	RAD21	O60216	631 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	MYC	P01106	439 aa	Predicted RBP	12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	CYP2D6	P10635	497 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	MAPK4	P31152	587 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	PDE1A	P54750	535 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	ICA1	Q05084	483 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	PRKCZ	Q05513	592 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	PDE4B	Q07343	736 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	SBK1	Q52WX2	424 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	TICAM2	Q86XR7	235 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	NKX2-3	Q8TAU0	364 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	SH3TC2	Q8TF17	1288 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	LPAR1	Q92633	364 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	OSBP2	Q969R2	916 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	ZNF333	Q96JL9	665 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	PAGR1	Q9BTK6	254 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	KANSL2	Q9H9L4	492 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	GOPC	Q9HD26	462 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	HOXC10	Q9NYD6	342 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	STAP2	Q9UGK3	403 aa		12.38	□□□□□ -0.43
UBR1-207	ENST00000568782	KIAA0100	Q14667	2235 aa	Known RBP	12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	GSG1L2	A8MUP6	293 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	ADCY3	O60266	1144 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	FLT3LG	P49771	235 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	MFAP1	P55081	439 aa	Known RBP	12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	CATSPERG	Q6ZRH7	1159 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	CHD1L	Q86WJ1	897 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	SMC5	Q8IY18	1101 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	SLC44A5	Q8NCS7	719 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	ACER1	Q8TDN7	264 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	PXYLP1	Q8TE99	480 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	RILPL2	Q969X0	211 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	TANGO6	Q9C0B7	1094 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	RPAP3	Q9H6T3	665 aa	Predicted RBP	12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	MORF4L1	Q9UBU8	362 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	RABGAP1	Q9Y3P9	1069 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	IVNS1ABP	Q9Y6Y0	642 aa		12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.37	□□□□□ -0.43
UBR1-207	ENST00000568782	CYP2D7	A0A087X1C5	515 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	CHGB	P05060	677 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	AKR1B1	P15121	316 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	VCAM1	P19320	739 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	CTGF	P29279	349 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	ERVK-9	P63128	1117 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	ERVK-24	P63145	666 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	CAP1	Q01518	475 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	IRF5	Q13568	498 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	COG2	Q14746	738 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	ZMYM1	Q5SVZ6	1142 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	WDR78	Q5VTH9	848 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	IFNL3	Q8IZI9	196 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	STK11IP	Q8N1F8	1099 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	SOCS4	Q8WXH5	440 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	NUDT12	Q9BQG2	462 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	RNF208	Q9H0X6	261 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	HELLS	Q9NRZ9	838 aa		12.36	□□□□□ -0.43
UBR1-207	ENST00000568782	MYH4	Q9Y623	1939 aa		12.35	□□□□□ -0.43
UBR1-207	ENST00000568782		M0R2C6	588 aa		12.35	□□□□□ -0.43
UBR1-207	ENST00000568782	CAPN2	P17655	700 aa		12.35	□□□□□ -0.43
UBR1-207	ENST00000568782	GUCY1A2	P33402	732 aa		12.35	□□□□□ -0.43
UBR1-207	ENST00000568782	PPP4R3B	Q5MIZ7	849 aa		12.35	□□□□□ -0.43
UBR1-207	ENST00000568782	TRMT44	Q8IYL2	757 aa	Known RBP	12.35	□□□□□ -0.43

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