RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 ADCY3O60266 1144 aa17.35■□□□□ 0.37
CMTM3-215ENST00000568477 ZFYP08048 801 aaPredicted RBP17.35■□□□□ 0.37
CMTM3-215ENST00000568477 GUCY1A2P33402 732 aa17.35■□□□□ 0.37
CMTM3-215ENST00000568477 UBXN2AP68543 259 aa17.35■□□□□ 0.37
CMTM3-215ENST00000568477 IRF5Q13568 498 aa17.35■□□□□ 0.37
CMTM3-215ENST00000568477 LRRFIP1Q32MZ4 808 aaKnown RBP17.35■□□□□ 0.37
CMTM3-215ENST00000568477 C12orf60Q5U649 245 aa17.35■□□□□ 0.37
CMTM3-215ENST00000568477 GTF3C2Q8WUA4 911 aaPredicted RBP17.35■□□□□ 0.37
CMTM3-215ENST00000568477 APPBP2Q92624 585 aa17.35■□□□□ 0.37
CMTM3-215ENST00000568477 DYNLL2Q96FJ2 89 aa17.35■□□□□ 0.37
CMTM3-215ENST00000568477 BAZ2AQ9UIF9 1905 aaKnown RBP17.35■□□□□ 0.37
CMTM3-215ENST00000568477 CYP2D7A0A087X1C5 515 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L15C9J2P7 530 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L13C9JLJ4 530 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L11C9JVI0 530 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L18D6R9N7 530 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L22D6RA61 530 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L17D6RBQ6 530 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L19D6RCP7 530 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L20D6RJB6 530 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 GLRX3O76003 335 aaKnown RBP17.34■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L24Q0WX57 530 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 MTFR1Q15390 333 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 TMEM179Q6ZVK1 233 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 GPRC5AQ8NFJ5 357 aa17.34■□□□□ 0.37
CMTM3-215ENST00000568477 OTUD7AQ8TE49 926 aaPredicted RBP17.34■□□□□ 0.37
CMTM3-215ENST00000568477 STRBPQ96SI9 672 aaKnown RBP17.34■□□□□ 0.37
CMTM3-215ENST00000568477 DOCK3Q8IZD9 2030 aa17.33■□□□□ 0.37
CMTM3-215ENST00000568477 CCL5P13501 91 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 ELNP15502 786 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 VCAM1P19320 739 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 MX1P20591 662 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 HDAC1Q13547 482 aaPredicted RBP17.33■□□□□ 0.36
CMTM3-215ENST00000568477 AAMPQ13685 434 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 PI4K2BQ8TCG2 481 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 PXYLP1Q8TE99 480 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 OSBP2Q969R2 916 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 GCC1Q96CN9 775 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 CCDC17Q96LX7 622 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 TXNRD2Q9NNW7 524 aa17.33■□□□□ 0.36
CMTM3-215ENST00000568477 ARPP21Q9UBL0 812 aaPredicted RBP17.33■□□□□ 0.36
CMTM3-215ENST00000568477 AKR1B1P15121 316 aa17.32■□□□□ 0.36
CMTM3-215ENST00000568477 CDK8P49336 464 aa17.32■□□□□ 0.36
CMTM3-215ENST00000568477 ANKRD45Q5TZF3 282 aa17.32■□□□□ 0.36
CMTM3-215ENST00000568477 PRPF38BQ5VTL8 546 aaKnown RBP17.32■□□□□ 0.36
CMTM3-215ENST00000568477 CTR9Q6PD62 1173 aa17.32■□□□□ 0.36
CMTM3-215ENST00000568477 C16orf86Q6ZW13 317 aa17.32■□□□□ 0.36
CMTM3-215ENST00000568477 PAGR1Q9BTK6 254 aa17.32■□□□□ 0.36
CMTM3-215ENST00000568477 RBPJLQ9UBG7 517 aa17.32■□□□□ 0.36
CMTM3-215ENST00000568477 SMIM22K7EJ46 135 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 GPAA1O43292 621 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 PEX10O60683 326 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 INHAP05111 366 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 ERVK-9P63128 1117 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 ERVK-24P63145 666 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 GIMAP6Q6P9H5 292 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 CATSPERGQ6ZRH7 1159 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 CCAR1Q8IX12 1150 aaKnown RBP17.31■□□□□ 0.36
CMTM3-215ENST00000568477 NKX2-3Q8TAU0 364 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 RNF208Q9H0X6 261 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 MYH8P13535 1937 aa17.31■□□□□ 0.36
CMTM3-215ENST00000568477 A0A1W2PRG0 241 aa17.3■□□□□ 0.36
CMTM3-215ENST00000568477 GSG1L2A8MUP6 293 aa17.3■□□□□ 0.36
CMTM3-215ENST00000568477 GJB1P08034 283 aa17.3■□□□□ 0.36
CMTM3-215ENST00000568477 GNAT2P19087 354 aa17.3■□□□□ 0.36
CMTM3-215ENST00000568477 MAPK4P31152 587 aa17.3■□□□□ 0.36
CMTM3-215ENST00000568477 ICA1Q05084 483 aa17.3■□□□□ 0.36
CMTM3-215ENST00000568477 RPAP3Q9H6T3 665 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-215ENST00000568477 SH2D4AQ9H788 454 aa17.3■□□□□ 0.36
CMTM3-215ENST00000568477 ARHGEF10LQ9HCE6 1279 aa17.3■□□□□ 0.36
CMTM3-215ENST00000568477 GJD2Q9UKL4 321 aa17.3■□□□□ 0.36
CMTM3-215ENST00000568477 RABGAP1Q9Y3P9 1069 aa17.3■□□□□ 0.36
CMTM3-215ENST00000568477 SALL3Q9BXA9 1300 aa17.29■□□□□ 0.36
CMTM3-215ENST00000568477 M0R2C6 588 aa17.29■□□□□ 0.36
CMTM3-215ENST00000568477 SBK1Q52WX2 424 aa17.29■□□□□ 0.36
CMTM3-215ENST00000568477 CLEC10AQ8IUN9 316 aa17.29■□□□□ 0.36
CMTM3-215ENST00000568477 SOCS4Q8WXH5 440 aa17.29■□□□□ 0.36
CMTM3-215ENST00000568477 UNC93B1Q9H1C4 597 aa17.29■□□□□ 0.36
CMTM3-215ENST00000568477 CWC22Q9HCG8 908 aaKnown RBP17.29■□□□□ 0.36
CMTM3-215ENST00000568477 BRCA2P51587 3418 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 GJA8P48165 433 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 TDO2P48775 406 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 CCNA1P78396 465 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 Q3C1V9 767 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 POTEEQ6S8J3 1075 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 LBX2Q6XYB7 198 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 SHISA4Q96DD7 197 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 NUDT12Q9BQG2 462 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 TANGO6Q9C0B7 1094 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 PORCNQ9H237 461 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 TMX2Q9Y320 296 aa17.28■□□□□ 0.36
CMTM3-215ENST00000568477 SPDYE16A6NNV3 312 aaPredicted RBP17.27■□□□□ 0.36
CMTM3-215ENST00000568477 MINDY4BA8MYZ0 360 aa17.27■□□□□ 0.36
CMTM3-215ENST00000568477 HMGCRP04035 888 aa17.27■□□□□ 0.36
CMTM3-215ENST00000568477 APPP05067 770 aa17.27■□□□□ 0.36
CMTM3-215ENST00000568477 PLEKHH3Q7Z736 793 aa17.27■□□□□ 0.36
CMTM3-215ENST00000568477 LPAR1Q92633 364 aa17.27■□□□□ 0.36
CMTM3-215ENST00000568477 KANSL2Q9H9L4 492 aa17.27■□□□□ 0.36
CMTM3-215ENST00000568477 EPB41L4AQ9HCS5 686 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms