RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 TPM1P09493 284 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 FXR1P51114 621 aaKnown RBP eCLIP10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 CHMP4BP1P59074 171 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 DPYDQ12882 1025 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 PTGDRQ13258 359 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 FILIP1LQ4L180 1135 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 DACH1Q9UI36 760 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 USP17L12C9JPN9 530 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 USP17L21D6R901 530 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 N4BP1O75113 896 aaKnown RBP10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 CSF1RP07333 972 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 IFNAR1P17181 557 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 XBP1P17861 261 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 PTPREP23469 700 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 KRT2P35908 639 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 MATR3P43243 847 aaKnown RBP eCLIP10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 CCDC93Q567U6 631 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 CATIPQ7Z7H3 387 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 GSPT2Q8IYD1 628 aaKnown RBP10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 GOLGA1Q92805 767 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 TRIM34Q9BYJ4 488 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 VAT1LQ9HCJ6 419 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 PDE11AQ9HCR9 933 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 MRC1P22897 1456 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 RAD21O60216 631 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 SRGAP2O75044 1071 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 CHRNDQ07001 517 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 CUL4BQ13620 913 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 ENOX2Q16206 610 aaKnown RBP10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 RASGRP2Q7LDG7 609 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 HDAC6Q9UBN7 1215 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 PHLPP2Q6ZVD8 1323 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 TCRBV5S4A2TA0A5A2 114 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 NUTM2BA6NNL0 878 aaPredicted RBP10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 NUTM2EB1AL46 878 aaPredicted RBP10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 KLRK1P26718 216 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 JAKMIP3Q5VZ66 844 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 CC2D1AQ6P1N0 951 aaPredicted RBP10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 TMEM139Q8IV31 216 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 BBXQ8WY36 941 aaPredicted RBP10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 ESR2Q92731 530 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 PAGE5Q96GU1 130 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 TIGD1Q96MW7 591 aa10.17□□□□□ -0.78
HDGFL3-206ENST00000568294 EFCAB8A8MWE9 144 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 ACTN4O43707 911 aaKnown RBP10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 PLCD1P51178 756 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 UBXN1Q04323 297 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 TTC38Q5R3I4 469 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 ENAHQ8N8S7 591 aaPredicted RBP10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 MLKLQ8NB16 471 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 SHISA4Q96DD7 197 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 CNNM2Q9H8M5 875 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 BRMS1Q9HCU9 246 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 TSPY2A6NKD2 308 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 GOLGA8HP0CJ92 632 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 CAGE1Q8TC20 777 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 CEP131Q9UPN4 1083 aa10.16□□□□□ -0.78
HDGFL3-206ENST00000568294 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 RNF225M0QZC1 329 aaPredicted RBP10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 TBC1D8O95759 1140 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 KRT9P35527 623 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 LONRF2Q1L5Z9 754 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 IQCA1Q86XH1 822 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 CTCFLQ8NI51 663 aaPredicted RBP10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 TNS3Q68CZ2 1445 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 N4BP2Q86UW6 1770 aaPredicted RBP10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 CYP19A1P11511 503 aaPredicted RBP10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 MORC3Q14149 939 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 VGLL2Q8N8G2 317 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 GPR101Q96P66 508 aaPredicted RBP10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 CHP1Q99653 195 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 STX8Q9UNK0 236 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 MRFAP1Q9Y605 127 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 SLIT3O75094 1523 aa10.15□□□□□ -0.78
HDGFL3-206ENST00000568294 MACROD2A1Z1Q3 448 aa10.15□□□□□ -0.79
HDGFL3-206ENST00000568294 H3BQF6 201 aa10.15□□□□□ -0.79
HDGFL3-206ENST00000568294 STX10O60499 249 aa10.15□□□□□ -0.79
HDGFL3-206ENST00000568294 C10orf67Q8IYJ2 551 aa10.15□□□□□ -0.79
HDGFL3-206ENST00000568294 NELFBQ8WX92 580 aa10.15□□□□□ -0.79
HDGFL3-206ENST00000568294 HPS3Q969F9 1004 aa10.15□□□□□ -0.79
HDGFL3-206ENST00000568294 PNKPQ96T60 521 aa10.15□□□□□ -0.79
HDGFL3-206ENST00000568294 ZPR1O75312 459 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 LIFRP42702 1097 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 CCDC178Q5BJE1 867 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 HEATR3Q7Z4Q2 680 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 SGMS1Q86VZ5 419 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 ENOX1Q8TC92 643 aaKnown RBP10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 POLD4Q9HCU8 107 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 SRPRBQ9Y5M8 271 aaKnown RBP10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 LAMA4Q16363 1823 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 CTAGE9A4FU28 777 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 EXOC5O00471 708 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 NPM3O75607 178 aaKnown RBP10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 STAT6P42226 847 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 EIF5P55010 431 aaKnown RBP10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 MDM2Q00987 491 aaPredicted RBP10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 ATP2B2Q01814 1243 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms