RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 SPTY2D1Q68D10 685 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-250ENST00000568290 GALNT17Q6IS24 598 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 CLEC4GQ6UXB4 293 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 CHST3Q7LGC8 479 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 DNAJC10Q8IXB1 793 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 CCDC144CPQ8IYA2 1237 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 DIS3L2Q8IYB7 885 aaKnown RBP8.7□□□□□ -1.02
ATXN3-250ENST00000568290 ZNF687Q8N1G0 1237 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 C17orf53Q8N3J3 647 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-250ENST00000568290 GPR161Q8N6U8 529 aaKnown RBP8.7□□□□□ -1.02
ATXN3-250ENST00000568290 CEP112Q8N8E3 955 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 PPP1R13BQ96KQ4 1090 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 PANX2Q96RD6 677 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 BAG1Q99933 345 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-250ENST00000568290 AATFQ9NY61 560 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATXN3-250ENST00000568290 SLC4A4Q9Y6R1 1079 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 TJP1Q07157 1748 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 B4E1Z4 1266 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 AKR1B15C9JRZ8 316 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-250ENST00000568290 PRPF3O43395 683 aaKnown RBP8.69□□□□□ -1.02
ATXN3-250ENST00000568290 KIF5CO60282 957 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 MBD4O95243 580 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 CYP19A1P11511 503 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-250ENST00000568290 FGFR2P21802 821 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 MARCKSP29966 332 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-250ENST00000568290 PLCD1P51178 756 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 CBX1P83916 185 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 SPATA1Q5VX52 437 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 ZNF34Q8IZ26 560 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 CRACR2BQ8N4Y2 399 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-250ENST00000568290 MAGEB6Q8N7X4 407 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 VGLL2Q8N8G2 317 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 IQUBQ8NA54 791 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 FANCBQ8NB91 859 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 EHBP1Q8NDI1 1231 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 CTCFLQ8NI51 663 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-250ENST00000568290 NOC3LQ8WTT2 800 aaKnown RBP8.69□□□□□ -1.02
ATXN3-250ENST00000568290 MAP3K14Q99558 947 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 BRIP1Q9BX63 1249 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 GREM2Q9H772 168 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 MAGEF1Q9HAY2 307 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 CDHR5Q9HBB8 845 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 STRN4Q9NRL3 753 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 ZNHIT6Q9NWK9 470 aaKnown RBP8.69□□□□□ -1.02
ATXN3-250ENST00000568290 TTF2Q9UNY4 1162 aaKnown RBP8.69□□□□□ -1.02
ATXN3-250ENST00000568290 RIC1Q4ADV7 1423 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 GLI3P10071 1580 aa8.69□□□□□ -1.02
ATXN3-250ENST00000568290 MAGEB6P1A0A0J9YX57 407 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 LAD1O00515 517 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 EIF3JO75822 258 aaKnown RBP8.68□□□□□ -1.02
ATXN3-250ENST00000568290 SLFN14P0C7P3 912 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-250ENST00000568290 PDE4BQ07343 736 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 NTRK3Q16288 839 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 C6orf132Q5T0Z8 1188 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 IFIT1BQ5T764 474 aaKnown RBP8.68□□□□□ -1.02
ATXN3-250ENST00000568290 ARL6IP4Q66PJ3 421 aaKnown RBP8.68□□□□□ -1.02
ATXN3-250ENST00000568290 ZNF771Q7L3S4 317 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-250ENST00000568290 CCDC148Q8NFR7 591 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 CCDC12Q8WUD4 166 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-250ENST00000568290 PIGBQ92521 554 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 NYXQ9GZU5 481 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 ANKRD2Q9GZV1 360 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 TSPYL1Q9H0U9 437 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 TMX1Q9H3N1 280 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 SH3GLB2Q9NR46 395 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 TRMT1Q9NXH9 659 aaKnown RBP8.68□□□□□ -1.02
ATXN3-250ENST00000568290 RAI14Q9P0K7 980 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 ZSWIM5Q9P217 1185 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 PCDHA5Q9Y5H7 936 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 UBN2Q6ZU65 1347 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 BCL9O00512 1426 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 LAMA4Q16363 1823 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 MYH7P12883 1935 aa8.68□□□□□ -1.02
ATXN3-250ENST00000568290 TCRBV5S4A2TA0A5A2 114 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 BIN1O00499 593 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 IPO7O95373 1038 aaKnown RBP8.67□□□□□ -1.02
ATXN3-250ENST00000568290 PIP4K2BP78356 416 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 PPARAQ07869 468 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 PTGDRQ13258 359 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 ORC2Q13416 577 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-250ENST00000568290 MORC3Q14149 939 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 NCAPHQ15003 741 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 BRD3Q15059 726 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 E4F1Q66K89 784 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-250ENST00000568290 IQCEQ6IPM2 695 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 CCDC70Q6NSX1 233 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 SHC4Q6S5L8 630 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 ITIH6Q6UXX5 1313 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 SYT10Q6XYQ8 523 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 CYB5R4Q7L1T6 521 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 TMTC1Q8IUR5 882 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 TBC1D10CQ8IV04 446 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 ANKRD18AQ8IVF6 992 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 FAM114A1Q8IWE2 563 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 ZNF654Q8IZM8 581 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 PDILTQ8N807 584 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 GOLGA1Q92805 767 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 RPGRIP1Q96KN7 1286 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms