RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 CYP27A1Q02318 531 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 CPSF6Q16630 551 aaKnown RBP eCLIP6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 DUSP27Q5VZP5 1158 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 RUFY4Q6ZNE9 571 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 CDH24Q86UP0 819 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 FAM181AQ8N9Y4 354 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 GIMAP7Q8NHV1 300 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 BAHD1Q8TBE0 780 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 SHDQ96IW2 340 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 GMLQ99445 158 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 KIF2CQ99661 725 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 METTL22Q9BUU2 404 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 CEP131Q9UPN4 1083 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 PRR33A8MZF0 331 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 RGS13O14921 159 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 FGRP09769 529 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 NME1P15531 152 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 GIPRP48546 466 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 CD97P48960 835 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 ZC3H6P61129 1189 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 MSMPQ1L6U9 139 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 CYP27C1Q4G0S4 372 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 NLRC3Q7RTR2 1065 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 LSRQ86X29 649 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 VWCEQ96DN2 955 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 FERD3LQ96RJ6 166 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 SLC9A7Q96T83 725 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 ZC3H7BQ9UGR2 993 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 LEMD3Q9Y2U8 911 aa6.35□□□□□ -1.39
HERPUD1-212ENST00000567944 IGF2BP3O00425 579 aaKnown RBP eCLIP6.34□□□□□ -1.39
HERPUD1-212ENST00000567944 TNFRSF10CO14798 259 aa6.34□□□□□ -1.39
HERPUD1-212ENST00000567944 CYP26A1O43174 497 aa6.34□□□□□ -1.39
HERPUD1-212ENST00000567944 IMPDH2P12268 514 aa6.34□□□□□ -1.39
HERPUD1-212ENST00000567944 LRRFIP1Q32MZ4 808 aaKnown RBP6.34□□□□□ -1.39
HERPUD1-212ENST00000567944 NAALADL2Q58DX5 795 aa6.34□□□□□ -1.39
HERPUD1-212ENST00000567944 MCF2L2Q86YR7 1114 aa6.34□□□□□ -1.39
HERPUD1-212ENST00000567944 FAM169BQ8N8A8 192 aa6.34□□□□□ -1.39
HERPUD1-212ENST00000567944 C8orf37Q96NL8 207 aa6.34□□□□□ -1.39
HERPUD1-212ENST00000567944 LRRC4CQ9HCJ2 640 aa6.34□□□□□ -1.39
HERPUD1-212ENST00000567944 ZYXQ15942 572 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-212ENST00000567944 NKPD1Q17RQ9 610 aa6.33□□□□□ -1.4
HERPUD1-212ENST00000567944 INTS3Q68E01 1043 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-212ENST00000567944 NFXL1Q6ZNB6 911 aa6.33□□□□□ -1.4
HERPUD1-212ENST00000567944 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
HERPUD1-212ENST00000567944 TMEM192Q8IY95 271 aa6.33□□□□□ -1.4
HERPUD1-212ENST00000567944 CCDC74BQ96LY2 380 aa6.33□□□□□ -1.4
HERPUD1-212ENST00000567944 SRRTQ9BXP5 876 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-212ENST00000567944 MKNK2Q9HBH9 465 aa6.33□□□□□ -1.4
HERPUD1-212ENST00000567944 MAPK8IP1Q9UQF2 711 aa6.33□□□□□ -1.4
HERPUD1-212ENST00000567944 KIAA1324LA8MWY0 1029 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 ADAMTS4O75173 837 aa6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 LRRN2O75325 713 aa6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 ZNF865P0CJ78 1059 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 RAG1P15918 1043 aa6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 SPINK2P20155 84 aa6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 MLECQ14165 292 aa6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 FBXW10Q5XX13 1052 aa6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 PHACTR4Q8IZ21 702 aa6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 PLD6Q8N2A8 252 aaKnown RBP6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 TAB3Q8N5C8 712 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 Q96M66 194 aa6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 TNKS2Q9H2K2 1166 aa6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 PRDM5Q9NQX1 630 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-212ENST00000567944 COBLO75128 1261 aa6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 SSTR4P31391 388 aa6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 EIF6P56537 245 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 ARID5AQ03989 594 aa6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 GNL2Q13823 731 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 DTX1Q86Y01 620 aa6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 WFDC3Q8IUB2 231 aa6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 SPACA3Q8IXA5 215 aa6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 KREMEN1Q96MU8 473 aa6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 TM9SF2Q99805 663 aa6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 GTF2IRD1Q9UHL9 959 aa6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 TPX2Q9ULW0 747 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 CAPN6Q9Y6Q1 641 aa6.31□□□□□ -1.4
HERPUD1-212ENST00000567944 LTBP3Q9NS15 1303 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 CEACAM5P06731 702 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 GUCY2CP25092 1073 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 DNAJA1P31689 397 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 ETFBP38117 255 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 SFRP5Q5T4F7 317 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 MCTP1Q6DN14 999 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 INTS5Q6P9B9 1019 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 VPS37DQ86XT2 251 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 STRIP2Q9ULQ0 834 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 ST14Q9Y5Y6 855 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 MRVI1Q9Y6F6 885 aa6.3□□□□□ -1.4
HERPUD1-212ENST00000567944 A0A1W2PQH9 124 aa6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 CBX7O95931 251 aa6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 PRNPP04156 253 aa6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 GBP1P32455 592 aa6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 CCNFP41002 786 aa6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 ETV3P41162 512 aa6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 TNK2Q07912 1038 aa6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 ZNF746Q6NUN9 644 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 UNC5AQ6ZN44 842 aa6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 NETO1Q8TDF5 533 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms