RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 PLXNB2O15031 1838 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 MYPNQ86TC9 1320 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 USP17L10C9JJH3 530 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 SMARCA5O60264 1052 aaPredicted RBP5.78□□□□□ -1.48
CLK3-219ENST00000567805 GDF11O95390 407 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 GH2P01242 217 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 POLR3DP05423 398 aaPredicted RBP5.78□□□□□ -1.48
CLK3-219ENST00000567805 OSBPP22059 807 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 CTGFP29279 349 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 GCLCP48506 637 aaPredicted RBP5.78□□□□□ -1.48
CLK3-219ENST00000567805 BACE1P56817 501 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 JAG1P78504 1218 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 MTMR2Q13614 643 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 FAM110CQ1W6H9 321 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 SLC4A8Q2Y0W8 1093 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 CERKLQ49MI3 558 aaPredicted RBP5.78□□□□□ -1.48
CLK3-219ENST00000567805 ZSCAN25Q6NSZ9 544 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 ANKRD13CQ8N6S4 541 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 RAET1EQ8TD07 263 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 EDC3Q96F86 508 aaKnown RBP5.78□□□□□ -1.48
CLK3-219ENST00000567805 ATP8A2Q9NTI2 1148 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 ECHDC1Q9NTX5 307 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 TMOD4Q9NZQ9 345 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 PARP14Q460N5 1801 aa5.78□□□□□ -1.48
CLK3-219ENST00000567805 DNAH12Q6ZR08 3092 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 POTEB3A0JP26 581 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 TNPO2O14787 897 aaKnown RBP5.77□□□□□ -1.49
CLK3-219ENST00000567805 SNPHO15079 494 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 MBD4O95243 580 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 HOXA7P31268 230 aaPredicted RBP5.77□□□□□ -1.49
CLK3-219ENST00000567805 GRK4P32298 578 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 SHMT1P34896 483 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 PLCD1P51178 756 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 USP14P54578 494 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 IRX3P78415 501 aaPredicted RBP5.77□□□□□ -1.49
CLK3-219ENST00000567805 PRKCZQ05513 592 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 GABPAQ06546 454 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 UBE3CQ15386 1083 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 ABCB5Q2M3G0 1257 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 SHROOM1Q2M3G4 852 aaPredicted RBP5.77□□□□□ -1.49
CLK3-219ENST00000567805 USP17L2Q6R6M4 530 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 POTEBQ6S5H4 581 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 LCORLQ8N3X6 602 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 SH3TC2Q8TF17 1288 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 GTF3C2Q8WUA4 911 aaPredicted RBP5.77□□□□□ -1.49
CLK3-219ENST00000567805 SDR42E1Q8WUS8 393 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 DDRGK1Q96HY6 314 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 C12orf42Q96LP6 360 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 ASCC2Q9H1I8 757 aaPredicted RBP5.77□□□□□ -1.49
CLK3-219ENST00000567805 ARMT1Q9H993 441 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 CABP5Q9NP86 173 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 DCP1AQ9NPI6 582 aaPredicted RBP5.77□□□□□ -1.49
CLK3-219ENST00000567805 TSHZ2Q9NRE2 1034 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 MCM9Q9NXL9 1143 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 SWAP70Q9UH65 585 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 PCDHB15Q9Y5E8 787 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 GREB1LQ9C091 1923 aaPredicted RBP5.77□□□□□ -1.49
CLK3-219ENST00000567805 MYH4Q9Y623 1939 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 A0A0G2JMZ2 1700 aa5.77□□□□□ -1.49
CLK3-219ENST00000567805 KIAA0100Q14667 2235 aaKnown RBP5.76□□□□□ -1.49
CLK3-219ENST00000567805 TTC41PQ6P2S7 1318 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 COL11A1P12107 1806 aaPredicted RBP5.76□□□□□ -1.49
CLK3-219ENST00000567805 RLFQ13129 1914 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 EN2P19622 333 aaPredicted RBP5.76□□□□□ -1.49
CLK3-219ENST00000567805 FLT3LGP49771 235 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 HERVK_113P62684 666 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 UBXN2AP68543 259 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 IRF5Q13568 498 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 AAMPQ13685 434 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 RAB3GAP1Q15042 981 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 LRRFIP1Q32MZ4 808 aaKnown RBP5.76□□□□□ -1.49
CLK3-219ENST00000567805 SLFNL1Q499Z3 407 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 AMOTL1Q8IY63 956 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 KBTBD3Q8NAB2 608 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 PXYLP1Q8TE99 480 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 COA7Q96BR5 231 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 YTHDC1Q96MU7 727 aaKnown RBP5.76□□□□□ -1.49
CLK3-219ENST00000567805 FEZ1Q99689 392 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 KRTAP3-2Q9BYR7 98 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 KIAA1683Q9H0B3 1180 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 EMILIN3Q9NT22 766 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 MORF4L1Q9UBU8 362 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 CIZ1Q9ULV3 898 aaPredicted RBP5.76□□□□□ -1.49
CLK3-219ENST00000567805 GABRQQ9UN88 632 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 PDE4DIPQ5VU43 2346 aa5.76□□□□□ -1.49
CLK3-219ENST00000567805 USP17L15C9J2P7 530 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 USP17L13C9JLJ4 530 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 USP17L11C9JVI0 530 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 USP17L18D6R9N7 530 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 USP17L22D6RA61 530 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 USP17L17D6RBQ6 530 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 USP17L19D6RCP7 530 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 USP17L20D6RJB6 530 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 MPHOSPH10O00566 681 aaKnown RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 ERC2O15083 957 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 PRKAB2O43741 272 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 ADCY3O60266 1144 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 GLRX3O76003 335 aaKnown RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 MYCP01106 439 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms