RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 DDX4Q9NQI0 724 aaKnown RBP12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 TAOK2Q9UL54 1235 aa12.62□□□□□ -0.39
VPS9D1-206ENST00000567379 DEXIO95424 95 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 TROAPQ12815 778 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 RCSD1Q6JBY9 416 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 OGFOD1Q8N543 542 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 AGBL3Q8NEM8 1001 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 MAP3K14Q99558 947 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 GZF1Q9H116 711 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 IL17RBQ9NRM6 502 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 TMOD2Q9NZR1 351 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 SERPINB13Q9UIV8 391 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 CFAP45Q9UL16 551 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 BCS1LQ9Y276 419 aa12.61□□□□□ -0.39
VPS9D1-206ENST00000567379 MYH8P13535 1937 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 MYH15Q9Y2K3 1946 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 UBE2HP62256 183 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 GABPAQ06546 454 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 CIAPIN1Q6FI81 312 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 BRAPQ7Z569 592 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 GMLQ99445 158 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 RNF26Q9BY78 433 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 EHD4Q9H223 541 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 MYH6P13533 1939 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 ELP1O95163 1332 aa12.6□□□□□ -0.39
VPS9D1-206ENST00000567379 PRPF3O43395 683 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 ENTPD3O75355 529 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 XBP1P17861 261 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 GNAQP50148 359 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 MMP14P50281 582 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 NFIAQ12857 509 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 GNL2Q13823 731 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 TNIP1Q15025 636 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 DLGAP5Q15398 846 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 SAFBQ15424 915 aaKnown RBP eCLIP12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 KRT40Q6A162 431 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 OTUD7BQ6GQQ9 843 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 TMTC3Q6ZXV5 915 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 NBPF11Q86T75 865 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 ZSCAN29Q8IWY8 852 aaPredicted RBP12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 SYAP1Q96A49 352 aaPredicted RBP12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 SPATA32Q96LK8 384 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 TDRD3Q9H7E2 651 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 TFIP11Q9UBB9 837 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 FAM198AQ9UFP1 575 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 PCDHAC2Q9Y5I4 1007 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 LTBP3Q9NS15 1303 aa12.59□□□□□ -0.39
VPS9D1-206ENST00000567379 PLIN4Q96Q06 1357 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 COL4A5P29400 1685 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 GADD45BO75293 160 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 TOP1P11387 765 aaKnown RBP12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 CXCL9Q07325 125 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 TCP10Q12799 353 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 GRM4Q14833 912 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 CAVIN1Q6NZI2 390 aaKnown RBP12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 FOXP4Q8IVH2 680 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 CCDC82Q8N4S0 544 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 PRMT6Q96LA8 375 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 CCDC17Q96LX7 622 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 AIFM3Q96NN9 605 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 TMEM47Q9BQJ4 181 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 RBM27Q9P2N5 1060 aaKnown RBP12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 PI4KBQ9UBF8 816 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 STX8Q9UNK0 236 aa12.58□□□□□ -0.4
VPS9D1-206ENST00000567379 SPDYE2BA6NHP3 402 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 NFKBIEO00221 500 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 PLEKHA8P1O95397 391 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 SPDYE6P0CI01 402 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 SHMT1P34896 483 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 DEKP35659 375 aaKnown RBP12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 CACNB3P54284 484 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 KIF23Q02241 960 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 FUT2Q10981 343 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 ZFPM1Q8IX07 1006 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 CMTR1Q8N1G2 835 aaKnown RBP12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 MTMR14Q8NCE2 650 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 LEO1Q8WVC0 666 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 COL2A1P02458 1487 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 ARFGEF1Q9Y6D6 1849 aa12.57□□□□□ -0.4
VPS9D1-206ENST00000567379 MYO1BO43795 1136 aa12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 AKR1B1P15121 316 aa12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 RPS12P25398 132 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 GUCY1A2P33402 732 aa12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 SRBD1Q8N5C6 995 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 CEP95Q96GE4 821 aa12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 GJB4Q9NTQ9 266 aa12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 ZNF70Q9UC06 446 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 RCOR1Q9UKL0 485 aa12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 ZBTB12Q9Y330 459 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 CNTNAP5Q8WYK1 1306 aa12.56□□□□□ -0.4
VPS9D1-206ENST00000567379 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
VPS9D1-206ENST00000567379 DDTLA6NHG4 134 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms